GCA_002254045.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMGBFLLDO_34 (original name was: gnl|Prokka|MGBFLLDO_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RiPP-like	1	1,758

gnlProkkaMGBFLLDO_114 (original name was: gnl|Prokka|MGBFLLDO_114)

Region	Type	From	To	Most similar known cluster		Similarity
Region 73.1	T3PKS	1	21,304

gnlProkkaMGBFLLDO_121 (original name was: gnl|Prokka|MGBFLLDO_121)

Region	Type	From	To	Most similar known cluster		Similarity
Region 80.1	RiPP-like	11,144	17,238

gnlProkkaMGBFLLDO_131 (original name was: gnl|Prokka|MGBFLLDO_131)

Region	Type	From	To	Most similar known cluster		Similarity
Region 89.1	RiPP-like	3,896	12,087	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	16%

gnlProkkaMGBFLLDO_135 (original name was: gnl|Prokka|MGBFLLDO_135)

Region	Type	From	To	Most similar known cluster		Similarity
Region 92.1	RiPP-like	24,392	36,542

Region	Type	From	To	Most similar known cluster	Similarity
Region 32.1	RiPP-like	1	1,758
Region 73.1	T3PKS	1	21,304
Region 80.1	RiPP-like	11,144	17,238
Region 89.1	RiPP-like	3,896	12,087	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	16%
Region 92.1	RiPP-like	24,392	36,542

No secondary metabolite regions were found in these records:: gnlProkkaMGBFLLDO_1 (original name was: gnl|Prokka|MGBFLLDO_1); gnlProkkaMGBFLLDO_3 (original name was: gnl|Prokka|MGBFLLDO_3); gnlProkkaMGBFLLDO_4 (original name was: gnl|Prokka|MGBFLLDO_4); gnlProkkaMGBFLLDO_5 (original name was: gnl|Prokka|MGBFLLDO_5); gnlProkkaMGBFLLDO_6 (original name was: gnl|Prokka|MGBFLLDO_6); gnlProkkaMGBFLLDO_7 (original name was: gnl|Prokka|MGBFLLDO_7); gnlProkkaMGBFLLDO_8 (original name was: gnl|Prokka|MGBFLLDO_8); gnlProkkaMGBFLLDO_9 (original name was: gnl|Prokka|MGBFLLDO_9); gnlProkkaMGBFLLDO_10 (original name was: gnl|Prokka|MGBFLLDO_10); gnlProkkaMGBFLLDO_11 (original name was: gnl|Prokka|MGBFLLDO_11); gnlProkkaMGBFLLDO_12 (original name was: gnl|Prokka|MGBFLLDO_12); gnlProkkaMGBFLLDO_13 (original name was: gnl|Prokka|MGBFLLDO_13); gnlProkkaMGBFLLDO_14 (original name was: gnl|Prokka|MGBFLLDO_14); gnlProkkaMGBFLLDO_15 (original name was: gnl|Prokka|MGBFLLDO_15); gnlProkkaMGBFLLDO_16 (original name was: gnl|Prokka|MGBFLLDO_16); gnlProkkaMGBFLLDO_17 (original name was: gnl|Prokka|MGBFLLDO_17); gnlProkkaMGBFLLDO_18 (original name was: gnl|Prokka|MGBFLLDO_18); gnlProkkaMGBFLLDO_19 (original name was: gnl|Prokka|MGBFLLDO_19); gnlProkkaMGBFLLDO_20 (original name was: gnl|Prokka|MGBFLLDO_20); gnlProkkaMGBFLLDO_21 (original name was: gnl|Prokka|MGBFLLDO_21); gnlProkkaMGBFLLDO_22 (original name was: gnl|Prokka|MGBFLLDO_22); gnlProkkaMGBFLLDO_23 (original name was: gnl|Prokka|MGBFLLDO_23); gnlProkkaMGBFLLDO_25 (original name was: gnl|Prokka|MGBFLLDO_25); gnlProkkaMGBFLLDO_26 (original name was: gnl|Prokka|MGBFLLDO_26); gnlProkkaMGBFLLDO_27 (original name was: gnl|Prokka|MGBFLLDO_27); gnlProkkaMGBFLLDO_28 (original name was: gnl|Prokka|MGBFLLDO_28); gnlProkkaMGBFLLDO_29 (original name was: gnl|Prokka|MGBFLLDO_29); gnlProkkaMGBFLLDO_30 (original name was: gnl|Prokka|MGBFLLDO_30); gnlProkkaMGBFLLDO_31 (original name was: gnl|Prokka|MGBFLLDO_31); gnlProkkaMGBFLLDO_32 (original name was: gnl|Prokka|MGBFLLDO_32); gnlProkkaMGBFLLDO_33 (original name was: gnl|Prokka|MGBFLLDO_33); gnlProkkaMGBFLLDO_36 (original name was: gnl|Prokka|MGBFLLDO_36); gnlProkkaMGBFLLDO_37 (original name was: gnl|Prokka|MGBFLLDO_37); gnlProkkaMGBFLLDO_38 (original name was: gnl|Prokka|MGBFLLDO_38); gnlProkkaMGBFLLDO_39 (original name was: gnl|Prokka|MGBFLLDO_39); gnlProkkaMGBFLLDO_40 (original name was: gnl|Prokka|MGBFLLDO_40); gnlProkkaMGBFLLDO_41 (original name was: gnl|Prokka|MGBFLLDO_41); gnlProkkaMGBFLLDO_42 (original name was: gnl|Prokka|MGBFLLDO_42); gnlProkkaMGBFLLDO_43 (original name was: gnl|Prokka|MGBFLLDO_43); gnlProkkaMGBFLLDO_44 (original name was: gnl|Prokka|MGBFLLDO_44); gnlProkkaMGBFLLDO_45 (original name was: gnl|Prokka|MGBFLLDO_45); gnlProkkaMGBFLLDO_47 (original name was: gnl|Prokka|MGBFLLDO_47); gnlProkkaMGBFLLDO_48 (original name was: gnl|Prokka|MGBFLLDO_48); gnlProkkaMGBFLLDO_49 (original name was: gnl|Prokka|MGBFLLDO_49); gnlProkkaMGBFLLDO_50 (original name was: gnl|Prokka|MGBFLLDO_50); gnlProkkaMGBFLLDO_51 (original name was: gnl|Prokka|MGBFLLDO_51); gnlProkkaMGBFLLDO_52 (original name was: gnl|Prokka|MGBFLLDO_52); gnlProkkaMGBFLLDO_58 (original name was: gnl|Prokka|MGBFLLDO_58); gnlProkkaMGBFLLDO_61 (original name was: gnl|Prokka|MGBFLLDO_61); gnlProkkaMGBFLLDO_73 (original name was: gnl|Prokka|MGBFLLDO_73); gnlProkkaMGBFLLDO_85 (original name was: gnl|Prokka|MGBFLLDO_85); gnlProkkaMGBFLLDO_92 (original name was: gnl|Prokka|MGBFLLDO_92); gnlProkkaMGBFLLDO_93 (original name was: gnl|Prokka|MGBFLLDO_93); gnlProkkaMGBFLLDO_94 (original name was: gnl|Prokka|MGBFLLDO_94); gnlProkkaMGBFLLDO_95 (original name was: gnl|Prokka|MGBFLLDO_95); gnlProkkaMGBFLLDO_96 (original name was: gnl|Prokka|MGBFLLDO_96); gnlProkkaMGBFLLDO_97 (original name was: gnl|Prokka|MGBFLLDO_97); gnlProkkaMGBFLLDO_98 (original name was: gnl|Prokka|MGBFLLDO_98); gnlProkkaMGBFLLDO_99 (original name was: gnl|Prokka|MGBFLLDO_99); gnlProkkaMGBFLLDO_100 (original name was: gnl|Prokka|MGBFLLDO_100); gnlProkkaMGBFLLDO_102 (original name was: gnl|Prokka|MGBFLLDO_102); gnlProkkaMGBFLLDO_103 (original name was: gnl|Prokka|MGBFLLDO_103); gnlProkkaMGBFLLDO_104 (original name was: gnl|Prokka|MGBFLLDO_104); gnlProkkaMGBFLLDO_105 (original name was: gnl|Prokka|MGBFLLDO_105); gnlProkkaMGBFLLDO_106 (original name was: gnl|Prokka|MGBFLLDO_106); gnlProkkaMGBFLLDO_107 (original name was: gnl|Prokka|MGBFLLDO_107); gnlProkkaMGBFLLDO_108 (original name was: gnl|Prokka|MGBFLLDO_108); gnlProkkaMGBFLLDO_109 (original name was: gnl|Prokka|MGBFLLDO_109); gnlProkkaMGBFLLDO_110 (original name was: gnl|Prokka|MGBFLLDO_110); gnlProkkaMGBFLLDO_111 (original name was: gnl|Prokka|MGBFLLDO_111); gnlProkkaMGBFLLDO_113 (original name was: gnl|Prokka|MGBFLLDO_113); gnlProkkaMGBFLLDO_115 (original name was: gnl|Prokka|MGBFLLDO_115); gnlProkkaMGBFLLDO_116 (original name was: gnl|Prokka|MGBFLLDO_116); gnlProkkaMGBFLLDO_117 (original name was: gnl|Prokka|MGBFLLDO_117); gnlProkkaMGBFLLDO_118 (original name was: gnl|Prokka|MGBFLLDO_118); gnlProkkaMGBFLLDO_119 (original name was: gnl|Prokka|MGBFLLDO_119); gnlProkkaMGBFLLDO_120 (original name was: gnl|Prokka|MGBFLLDO_120); gnlProkkaMGBFLLDO_122 (original name was: gnl|Prokka|MGBFLLDO_122); gnlProkkaMGBFLLDO_124 (original name was: gnl|Prokka|MGBFLLDO_124); gnlProkkaMGBFLLDO_125 (original name was: gnl|Prokka|MGBFLLDO_125); gnlProkkaMGBFLLDO_126 (original name was: gnl|Prokka|MGBFLLDO_126); gnlProkkaMGBFLLDO_127 (original name was: gnl|Prokka|MGBFLLDO_127); gnlProkkaMGBFLLDO_128 (original name was: gnl|Prokka|MGBFLLDO_128); gnlProkkaMGBFLLDO_129 (original name was: gnl|Prokka|MGBFLLDO_129); gnlProkkaMGBFLLDO_130 (original name was: gnl|Prokka|MGBFLLDO_130); gnlProkkaMGBFLLDO_132 (original name was: gnl|Prokka|MGBFLLDO_132); gnlProkkaMGBFLLDO_133 (original name was: gnl|Prokka|MGBFLLDO_133); gnlProkkaMGBFLLDO_136 (original name was: gnl|Prokka|MGBFLLDO_136); gnlProkkaMGBFLLDO_137 (original name was: gnl|Prokka|MGBFLLDO_137); gnlProkkaMGBFLLDO_138 (original name was: gnl|Prokka|MGBFLLDO_138); gnlProkkaMGBFLLDO_139 (original name was: gnl|Prokka|MGBFLLDO_139); gnlProkkaMGBFLLDO_140 (original name was: gnl|Prokka|MGBFLLDO_140); gnlProkkaMGBFLLDO_141 (original name was: gnl|Prokka|MGBFLLDO_141); gnlProkkaMGBFLLDO_142 (original name was: gnl|Prokka|MGBFLLDO_142); gnlProkkaMGBFLLDO_143 (original name was: gnl|Prokka|MGBFLLDO_143); gnlProkkaMGBFLLDO_144 (original name was: gnl|Prokka|MGBFLLDO_144)

Compact view

gnlProkkaMGBFLLDO_34 - Region 1 - RiPP-like

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Location: 1 - 1,758 nt. (total: 1,758 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMGBFLLDO_114 - Region 1 - T3PKS

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Location: 1 - 21,304 nt. (total: 21,304 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMGBFLLDO_121 - Region 1 - RiPP-like

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Location: 11,144 - 17,238 nt. (total: 6,095 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMGBFLLDO_131 - Region 1 - RiPP-like

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Location: 3,896 - 12,087 nt. (total: 8,192 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaMGBFLLDO_135 - Region 1 - RiPP-like

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Location: 24,392 - 36,542 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.