GCA_002254165.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJNFMDFND_34 (original name was: gnl|Prokka|JNFMDFND_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RiPP-like	37,269	58,872	gassericin T	RiPP	22%

gnlProkkaJNFMDFND_56 (original name was: gnl|Prokka|JNFMDFND_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 54.1	RiPP-like	41,033	48,857

gnlProkkaJNFMDFND_63 (original name was: gnl|Prokka|JNFMDFND_63)

Region	Type	From	To	Most similar known cluster		Similarity
Region 55.1	RiPP-like	67,822	79,972

gnlProkkaJNFMDFND_75 (original name was: gnl|Prokka|JNFMDFND_75)

Region	Type	From	To	Most similar known cluster		Similarity
Region 58.1	T3PKS	1	28,972

No secondary metabolite regions were found in these records:: gnlProkkaJNFMDFND_1 (original name was: gnl|Prokka|JNFMDFND_1); gnlProkkaJNFMDFND_2 (original name was: gnl|Prokka|JNFMDFND_2); gnlProkkaJNFMDFND_3 (original name was: gnl|Prokka|JNFMDFND_3); gnlProkkaJNFMDFND_4 (original name was: gnl|Prokka|JNFMDFND_4); gnlProkkaJNFMDFND_5 (original name was: gnl|Prokka|JNFMDFND_5); gnlProkkaJNFMDFND_6 (original name was: gnl|Prokka|JNFMDFND_6); gnlProkkaJNFMDFND_7 (original name was: gnl|Prokka|JNFMDFND_7); gnlProkkaJNFMDFND_8 (original name was: gnl|Prokka|JNFMDFND_8); gnlProkkaJNFMDFND_9 (original name was: gnl|Prokka|JNFMDFND_9); gnlProkkaJNFMDFND_10 (original name was: gnl|Prokka|JNFMDFND_10); gnlProkkaJNFMDFND_11 (original name was: gnl|Prokka|JNFMDFND_11); gnlProkkaJNFMDFND_12 (original name was: gnl|Prokka|JNFMDFND_12); gnlProkkaJNFMDFND_13 (original name was: gnl|Prokka|JNFMDFND_13); gnlProkkaJNFMDFND_14 (original name was: gnl|Prokka|JNFMDFND_14); gnlProkkaJNFMDFND_15 (original name was: gnl|Prokka|JNFMDFND_15); gnlProkkaJNFMDFND_16 (original name was: gnl|Prokka|JNFMDFND_16); gnlProkkaJNFMDFND_17 (original name was: gnl|Prokka|JNFMDFND_17); gnlProkkaJNFMDFND_18 (original name was: gnl|Prokka|JNFMDFND_18); gnlProkkaJNFMDFND_19 (original name was: gnl|Prokka|JNFMDFND_19); gnlProkkaJNFMDFND_20 (original name was: gnl|Prokka|JNFMDFND_20); gnlProkkaJNFMDFND_21 (original name was: gnl|Prokka|JNFMDFND_21); gnlProkkaJNFMDFND_22 (original name was: gnl|Prokka|JNFMDFND_22); gnlProkkaJNFMDFND_23 (original name was: gnl|Prokka|JNFMDFND_23); gnlProkkaJNFMDFND_24 (original name was: gnl|Prokka|JNFMDFND_24); gnlProkkaJNFMDFND_25 (original name was: gnl|Prokka|JNFMDFND_25); gnlProkkaJNFMDFND_26 (original name was: gnl|Prokka|JNFMDFND_26); gnlProkkaJNFMDFND_27 (original name was: gnl|Prokka|JNFMDFND_27); gnlProkkaJNFMDFND_28 (original name was: gnl|Prokka|JNFMDFND_28); gnlProkkaJNFMDFND_29 (original name was: gnl|Prokka|JNFMDFND_29); gnlProkkaJNFMDFND_30 (original name was: gnl|Prokka|JNFMDFND_30); gnlProkkaJNFMDFND_31 (original name was: gnl|Prokka|JNFMDFND_31); gnlProkkaJNFMDFND_32 (original name was: gnl|Prokka|JNFMDFND_32); gnlProkkaJNFMDFND_33 (original name was: gnl|Prokka|JNFMDFND_33); gnlProkkaJNFMDFND_35 (original name was: gnl|Prokka|JNFMDFND_35); gnlProkkaJNFMDFND_36 (original name was: gnl|Prokka|JNFMDFND_36); gnlProkkaJNFMDFND_37 (original name was: gnl|Prokka|JNFMDFND_37); gnlProkkaJNFMDFND_38 (original name was: gnl|Prokka|JNFMDFND_38); gnlProkkaJNFMDFND_39 (original name was: gnl|Prokka|JNFMDFND_39); gnlProkkaJNFMDFND_40 (original name was: gnl|Prokka|JNFMDFND_40); gnlProkkaJNFMDFND_41 (original name was: gnl|Prokka|JNFMDFND_41); gnlProkkaJNFMDFND_42 (original name was: gnl|Prokka|JNFMDFND_42); gnlProkkaJNFMDFND_43 (original name was: gnl|Prokka|JNFMDFND_43); gnlProkkaJNFMDFND_44 (original name was: gnl|Prokka|JNFMDFND_44); gnlProkkaJNFMDFND_45 (original name was: gnl|Prokka|JNFMDFND_45); gnlProkkaJNFMDFND_46 (original name was: gnl|Prokka|JNFMDFND_46); gnlProkkaJNFMDFND_47 (original name was: gnl|Prokka|JNFMDFND_47); gnlProkkaJNFMDFND_48 (original name was: gnl|Prokka|JNFMDFND_48); gnlProkkaJNFMDFND_49 (original name was: gnl|Prokka|JNFMDFND_49); gnlProkkaJNFMDFND_50 (original name was: gnl|Prokka|JNFMDFND_50); gnlProkkaJNFMDFND_51 (original name was: gnl|Prokka|JNFMDFND_51); gnlProkkaJNFMDFND_52 (original name was: gnl|Prokka|JNFMDFND_52); gnlProkkaJNFMDFND_53 (original name was: gnl|Prokka|JNFMDFND_53); gnlProkkaJNFMDFND_67 (original name was: gnl|Prokka|JNFMDFND_67); gnlProkkaJNFMDFND_73 (original name was: gnl|Prokka|JNFMDFND_73); gnlProkkaJNFMDFND_76 (original name was: gnl|Prokka|JNFMDFND_76); gnlProkkaJNFMDFND_77 (original name was: gnl|Prokka|JNFMDFND_77); gnlProkkaJNFMDFND_78 (original name was: gnl|Prokka|JNFMDFND_78)

Compact view

gnlProkkaJNFMDFND_34 - Region 1 - RiPP-like

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Location: 37,269 - 58,872 nt. (total: 21,604 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaJNFMDFND_56 - Region 1 - RiPP-like

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Location: 41,033 - 48,857 nt. (total: 7,825 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJNFMDFND_63 - Region 1 - RiPP-like

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Location: 67,822 - 79,972 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJNFMDFND_75 - Region 1 - T3PKS

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Location: 1 - 28,972 nt. (total: 28,972 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.