GCA_002254255.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLPGCKNOP_9 (original name was: gnl|Prokka|LPGCKNOP_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	31,828	42,120

gnlProkkaLPGCKNOP_12 (original name was: gnl|Prokka|LPGCKNOP_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	59,833	70,257

gnlProkkaLPGCKNOP_15 (original name was: gnl|Prokka|LPGCKNOP_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	T3PKS	74,495	115,652

Region	Type	From	To	Similarity
Region 9.1	RiPP-like	31,828	42,120
Region 12.1	RiPP-like	59,833	70,257
Region 15.1	T3PKS	74,495	115,652

No secondary metabolite regions were found in these records:: gnlProkkaLPGCKNOP_1 (original name was: gnl|Prokka|LPGCKNOP_1); gnlProkkaLPGCKNOP_2 (original name was: gnl|Prokka|LPGCKNOP_2); gnlProkkaLPGCKNOP_3 (original name was: gnl|Prokka|LPGCKNOP_3); gnlProkkaLPGCKNOP_4 (original name was: gnl|Prokka|LPGCKNOP_4); gnlProkkaLPGCKNOP_5 (original name was: gnl|Prokka|LPGCKNOP_5); gnlProkkaLPGCKNOP_6 (original name was: gnl|Prokka|LPGCKNOP_6); gnlProkkaLPGCKNOP_7 (original name was: gnl|Prokka|LPGCKNOP_7); gnlProkkaLPGCKNOP_8 (original name was: gnl|Prokka|LPGCKNOP_8); gnlProkkaLPGCKNOP_10 (original name was: gnl|Prokka|LPGCKNOP_10); gnlProkkaLPGCKNOP_11 (original name was: gnl|Prokka|LPGCKNOP_11); gnlProkkaLPGCKNOP_13 (original name was: gnl|Prokka|LPGCKNOP_13); gnlProkkaLPGCKNOP_14 (original name was: gnl|Prokka|LPGCKNOP_14); gnlProkkaLPGCKNOP_16 (original name was: gnl|Prokka|LPGCKNOP_16); gnlProkkaLPGCKNOP_17 (original name was: gnl|Prokka|LPGCKNOP_17); gnlProkkaLPGCKNOP_18 (original name was: gnl|Prokka|LPGCKNOP_18); gnlProkkaLPGCKNOP_19 (original name was: gnl|Prokka|LPGCKNOP_19); gnlProkkaLPGCKNOP_20 (original name was: gnl|Prokka|LPGCKNOP_20); gnlProkkaLPGCKNOP_21 (original name was: gnl|Prokka|LPGCKNOP_21); gnlProkkaLPGCKNOP_22 (original name was: gnl|Prokka|LPGCKNOP_22); gnlProkkaLPGCKNOP_23 (original name was: gnl|Prokka|LPGCKNOP_23); gnlProkkaLPGCKNOP_24 (original name was: gnl|Prokka|LPGCKNOP_24); gnlProkkaLPGCKNOP_25 (original name was: gnl|Prokka|LPGCKNOP_25); gnlProkkaLPGCKNOP_26 (original name was: gnl|Prokka|LPGCKNOP_26); gnlProkkaLPGCKNOP_27 (original name was: gnl|Prokka|LPGCKNOP_27); gnlProkkaLPGCKNOP_28 (original name was: gnl|Prokka|LPGCKNOP_28); gnlProkkaLPGCKNOP_29 (original name was: gnl|Prokka|LPGCKNOP_29); gnlProkkaLPGCKNOP_30 (original name was: gnl|Prokka|LPGCKNOP_30); gnlProkkaLPGCKNOP_31 (original name was: gnl|Prokka|LPGCKNOP_31); gnlProkkaLPGCKNOP_32 (original name was: gnl|Prokka|LPGCKNOP_32); gnlProkkaLPGCKNOP_33 (original name was: gnl|Prokka|LPGCKNOP_33); gnlProkkaLPGCKNOP_34 (original name was: gnl|Prokka|LPGCKNOP_34); gnlProkkaLPGCKNOP_35 (original name was: gnl|Prokka|LPGCKNOP_35); gnlProkkaLPGCKNOP_36 (original name was: gnl|Prokka|LPGCKNOP_36); gnlProkkaLPGCKNOP_37 (original name was: gnl|Prokka|LPGCKNOP_37); gnlProkkaLPGCKNOP_38 (original name was: gnl|Prokka|LPGCKNOP_38); gnlProkkaLPGCKNOP_39 (original name was: gnl|Prokka|LPGCKNOP_39); gnlProkkaLPGCKNOP_40 (original name was: gnl|Prokka|LPGCKNOP_40); gnlProkkaLPGCKNOP_41 (original name was: gnl|Prokka|LPGCKNOP_41); gnlProkkaLPGCKNOP_42 (original name was: gnl|Prokka|LPGCKNOP_42); gnlProkkaLPGCKNOP_43 (original name was: gnl|Prokka|LPGCKNOP_43); gnlProkkaLPGCKNOP_44 (original name was: gnl|Prokka|LPGCKNOP_44); gnlProkkaLPGCKNOP_45 (original name was: gnl|Prokka|LPGCKNOP_45); gnlProkkaLPGCKNOP_46 (original name was: gnl|Prokka|LPGCKNOP_46); gnlProkkaLPGCKNOP_47 (original name was: gnl|Prokka|LPGCKNOP_47); gnlProkkaLPGCKNOP_48 (original name was: gnl|Prokka|LPGCKNOP_48); gnlProkkaLPGCKNOP_49 (original name was: gnl|Prokka|LPGCKNOP_49); gnlProkkaLPGCKNOP_51 (original name was: gnl|Prokka|LPGCKNOP_51); gnlProkkaLPGCKNOP_56 (original name was: gnl|Prokka|LPGCKNOP_56); gnlProkkaLPGCKNOP_63 (original name was: gnl|Prokka|LPGCKNOP_63); gnlProkkaLPGCKNOP_67 (original name was: gnl|Prokka|LPGCKNOP_67); gnlProkkaLPGCKNOP_75 (original name was: gnl|Prokka|LPGCKNOP_75); gnlProkkaLPGCKNOP_78 (original name was: gnl|Prokka|LPGCKNOP_78); gnlProkkaLPGCKNOP_86 (original name was: gnl|Prokka|LPGCKNOP_86); gnlProkkaLPGCKNOP_89 (original name was: gnl|Prokka|LPGCKNOP_89); gnlProkkaLPGCKNOP_97 (original name was: gnl|Prokka|LPGCKNOP_97)

Compact view

gnlProkkaLPGCKNOP_9 - Region 1 - RiPP-like

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Location: 31,828 - 42,120 nt. (total: 10,293 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLPGCKNOP_12 - Region 1 - RiPP-like

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Location: 59,833 - 70,257 nt. (total: 10,425 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLPGCKNOP_15 - Region 1 - T3PKS

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Location: 74,495 - 115,652 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.