Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_002257625.1	Lacticaseibacillus paracasei	TK1501	SAMN05921089	2015	China:Inner Mongolia	-	0	0	0	1	1.00
2	GCA_003199005.1	Lacticaseibacillus paracasei	Lpc10	SAMN09283999	2014	Argentina: Provincia de Rio Negro	-	305	0	0	1	1.00
3	GCA_000155515.2	Lacticaseibacillus paracasei subsp. paracasei 8700:2	362.5013889	SAMN02463682	-	-	Homo sapiens	309	0	0	1	1.00
4	GCA_022614605.1	Lacticaseibacillus paracasei	GMNL-653	SAMN22548460	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	310	0	0	1	1.00
5	GCA_001540885.1	Lacticaseibacillus paracasei	Lc1542	SAMN03702539	2012	France	bovine	327	0	0	2	2.00
6	GCA_002079285.1	Lacticaseibacillus paracasei	IIA	SAMN04571918	2014-05-05	Indonesia: Bogor	-	398	0	0	1	1.00
7	GCA_000410135.1	Lacticaseibacillus paracasei subsp. paracasei Lpp17	Lpp17	SAMN02469707	1987	-	-	403	0	0	2	2.00
8	GCA_000418515.1	Lacticaseibacillus paracasei	LOCK919	SAMN02603330	-	-	-	430	0	0	1	1.00
9	GCA_030360665.1	Lacticaseibacillus paracasei	TOM.1374	SAMN35776908	2022-11	Russia: Altai	-	430	0	0	2	2.00
10	GCA_030360685.1	Lacticaseibacillus paracasei	TOM.1362	SAMN35776906	2022-11	Russia: Altai	-	431	0	0	2	2.00
11	GCA_049191405.1	Lacticaseibacillus paracasei	IATA083	SAMN45053962	2022	Spain:Valencia	Homo sapiens	431	0	0	2	2.00
12	GCA_000409875.1	Lacticaseibacillus paracasei subsp. paracasei Lpp46	Lpp46	SAMN02469709	1996	-	-	432	0	0	2	2.00
13	GCA_048500655.1	Lacticaseibacillus paracasei	CBA7104	SAMN46760028	2016-10-13	South Korea: Bundang	Homo sapiens	433	0	0	1	1.00
14	GCA_002115655.1	Lacticaseibacillus paracasei	DmW_181	SAMN06767179	2013-07	USA: New York	Drosophila	437	0	0	2	2.00
15	GCA_003627255.1	Lacticaseibacillus paracasei	ZFM54	SAMN07305422	2011-08-03	China:Zhejiang maternal and child health hospital	Homo sapiens	438	0	0	1	1.00
16	GCA_015714835.1	Lacticaseibacillus paracasei subsp. paracasei	K114	SAMN12234693	2017-03-10	Ethiopia: Addis Ababa	-	441	0	0	2	2.00
17	GCA_025190725.1	Lacticaseibacillus paracasei	CIRM-BIA 699	SAMN10365439	1972	-	-	447	0	0	2	2.00
18	GCA_026797475.1	Lacticaseibacillus paracasei	CBP-1042	SAMN27675067	-	-	-	447	0	0	2	2.00
19	GCA_003712245.1	Lacticaseibacillus paracasei	FAM18108	SAMN04088862	2003	Switzerland	-	448	0	0	2	2.00
20	GCA_028878305.1	Lacticaseibacillus paracasei	NRRL B-456	SAMN23708197	2012-01-30	Italy	-	448	0	0	2	2.00
21	GCA_037283385.1	Lacticaseibacillus paracasei	NRC_P4	SAMN32629231	2020-03	Egypt:Giza	cow	449	0	0	2	2.00
22	GCA_025190565.1	Lacticaseibacillus paracasei	CIRM-BIA 2128	SAMN10365446	1993	-	-	450	0	0	2	2.00
23	GCA_037414215.1	Lacticaseibacillus paracasei	LPC100	SAMN39212581	1998	Italy: Universit Cattolica di Piacenza	Homo sapiens	450	0	0	1	1.00
24	GCA_002148805.1	Lacticaseibacillus paracasei	DPC4206	SAMN06220137	1995-07	Ireland	-	452	0	0	2	2.00
25	GCA_002148885.1	Lacticaseibacillus paracasei	DPC4536	SAMN06463780	1995-11	Ireland	-	452	0	0	2	2.00
26	GCA_003434205.1	Lacticaseibacillus paracasei	AM33-2AC	SAMN09736452	2013-12-01	China: Shenzhen	Homo sapiens	452	0	0	2	2.00
27	GCA_016887785.1	Lacticaseibacillus paracasei	2306	SAMN17562096	2011-06-09	Italy	-	452	0	0	2	2.00
28	GCA_024498315.1	Lacticaseibacillus paracasei	SMN-LBK	SAMN29933592	2016-11-21	China: Xinjiang	-	452	0	0	1	1.00
29	GCA_024622515.1	Lacticaseibacillus paracasei	DSM 28675	SAMN29593134	2012	Germany: Freising	Mus musculus	452	0	0	2	2.00
30	GCA_028320385.1	Lacticaseibacillus paracasei	1001270st1_F8_1001270H_150608	SAMN31322638	2015-06-08	USA	Homo sapiens	452	0	0	2	2.00
31	GCA_035586595.1	Lacticaseibacillus paracasei	HP-B1337	SAMN38922877	2023-12-15	China	-	452	0	0	1	1.00
32	GCA_036281375.1	Lacticaseibacillus paracasei	CUL07A	SAMN09708453	-	-	-	452	0	0	2	2.00
33	GCA_040785095.1	Lacticaseibacillus paracasei	gbc_f	SAMN41082101	2021	USA: Glendale, Arizona	-	452	0	0	2	2.00
34	GCA_041283745.2	Lacticaseibacillus paracasei	ORD 0998	SAMN43000418	2016-01	Spain: Sevilla	Homo sapiens	452	0	0	1	1.00
35	GCA_045808845.1	Lacticaseibacillus paracasei	MSR2	SAMN45146297	2024	Bangladesh	-	452	0	0	2	2.00
36	GCA_048282615.1	Lacticaseibacillus paracasei	439	SAMN46889214	2023-12-12	China	-	452	0	0	1	1.00
37	GCA_049191845.1	Lacticaseibacillus paracasei	IATA110	SAMN45053973	2022	Spain:Valencia	Homo sapiens	452	0	0	2	2.00
38	GCA_049205075.1	Lacticaseibacillus paracasei	IATA109	SAMN45053972	2022	Spain:Valencia	Homo sapiens	452	0	0	2	2.00
39	GCA_000309785.1	Lacticaseibacillus paracasei	Lpc-37	SAMN02472013	-	-	-	453	0	0	2	2.00
40	GCA_003712565.1	Lacticaseibacillus paracasei	FAM19317	SAMN04088878	1990	Switzerland	-	453	0	0	2	2.00
41	GCA_016757675.1	Lacticaseibacillus paracasei subsp. tolerans	S-NA5	SAMN17359331	2017-12	China: Xinjiang	-	453	0	0	1	1.00
42	GCA_016757695.1	Lacticaseibacillus paracasei subsp. tolerans	S-NB	SAMN17359333	2017-12	China: Xinjiang	-	453	0	0	1	1.00
43	GCA_003712965.1	Lacticaseibacillus paracasei	FAM6410	SAMN04088893	-	Switzerland	-	454	0	0	2	2.00
44	GCA_003712985.1	Lacticaseibacillus paracasei	FAM8140	SAMN04088895	-	Switzerland	-	454	0	0	2	2.00
45	GCA_015693945.1	Lacticaseibacillus paracasei subsp. tolerans	ZY-1	SAMN16861159	2017-06	China	-	454	0	0	1	1.00
46	GCA_030710015.1	Lacticaseibacillus paracasei	ULE721	SAMN33593465	2018-01-15	Spain:Leon	-	455	0	0	2	2.00
47	GCA_000309665.1	Lacticaseibacillus paracasei	M36	SAMN02472000	-	USA: Wisconsin	-	458	0	0	2	2.00
48	GCA_000019245.3	Lacticaseibacillus paracasei	Zhang	SAMN02603933	-	China: Inner Mongolia	-	460	0	0	1	1.00
49	GCA_022819265.1	Lacticaseibacillus paracasei	SCB0563	SAMN26885627	2013-09-10	China:Guangdong	-	461	0	0	1	1.00
50	GCA_000410235.1	Lacticaseibacillus paracasei subsp. paracasei Lpp74	Lpp74	SAMN02469728	2000	-	-	462	0	0	2	2.00
51	GCA_025757505.1	Lacticaseibacillus paracasei	NG-LCU-ST2	SAMN31037893	2022-03-03	Nigeria: Ibadan, Oyo State	Maize	463	0	0	1	1.00
52	GCA_005049135.1	Lacticaseibacillus paracasei	S49	SAMN11456259	2014	Canada:Lethbridge	Bos taurus	464	0	0	2	2.00
53	GCA_028878355.1	Lacticaseibacillus paracasei	LMG 25883	SAMN23708195	2012-01-30	Italy	-	464	0	0	2	2.00
54	GCA_002904305.1	Lacticaseibacillus paracasei	CCC B1205	SAMN03813856	-	USA	-	466	0	0	2	2.00
55	GCA_015476175.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0747	SAMN16668663	-	South Korea	-	466	0	0	1	1.00
56	GCA_015476195.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0761	SAMN16668817	-	South Korea	-	467	0	0	1	1.00
57	GCA_016890245.1	Lacticaseibacillus paracasei	YT170	SAMN17818118	2020-10-11	China: Chengdu	Rex rabbit	467	0	0	2	2.00
58	GCA_008369945.1	Lacticaseibacillus paracasei	DTA93	SAMN12661681	2016-10-22	Brazil	Homo sapiens	468	0	0	2	2.00
59	GCA_009931715.1	Lacticaseibacillus paracasei	CACC 566	SAMN13871807	2018-10	South Korea:Jeongeup-si	Canine	468	0	0	1	1.00
60	GCA_012955485.1	Lacticaseibacillus paracasei	347-16	SAMN13259076	2016	Russia: Kislovodsk	Homo sapiens	468	0	0	1	1.00
61	GCA_013307125.1	Lacticaseibacillus paracasei	Lp02	SAMN11489091	2018-06-15	South Korea:Kyunggi-do	Homo sapiens	468	0	0	2	2.00
62	GCA_024637915.1	Lacticaseibacillus paracasei	VHProbi F11	SAMN27160580	2021-01-25	China:Qingdao	Homo sapiens	468	0	0	1	1.00
63	GCA_028322945.1	Lacticaseibacillus paracasei	1001295st1_G5_1001295H_181012	SAMN31322639	2018-10-12	USA	Homo sapiens	468	0	0	2	2.00
64	GCA_029906365.1	Lacticaseibacillus paracasei subsp. paracasei	MI3	SAMN34106059	2022-09-01	South Korea	Homo sapiens	468	0	0	1	1.00
65	GCA_037283365.1	Lacticaseibacillus paracasei	NRC_P5	SAMN32629232	2020-03	Egypt:Qalyubia	buffalo	468	0	0	2	2.00
66	GCA_037283435.1	Lacticaseibacillus paracasei	NRC_P6	SAMN32629233	2020-03	Egypt:Giza	buffalo	468	0	0	2	2.00
67	GCA_037283545.1	Lacticaseibacillus paracasei	NRC_P3	SAMN32629230	2020-03	Egypt:Sohag	cow	468	0	0	2	2.00
68	GCA_042015765.1	Lacticaseibacillus paracasei	ZJUZ2-3	SAMN43503360	2024-02-04	China: Hangzhou	Homo sapiens	468	0	0	1	1.00
69	GCA_004141835.1	Lacticaseibacillus paracasei	SRCM103299	SAMN10849469	2018	South Korea	-	470	0	0	1	1.00
70	GCA_049201625.1	Lacticaseibacillus paracasei	UBLPc-87	SAMN47217620	2018-05-05	India: Hyderabad	-	470	0	0	2	2.00
71	GCA_028878105.1	Lacticaseibacillus paracasei	TMW 1.300	SAMN23708206	2012-01-30	Italy	-	471	0	0	2	2.00
72	GCA_001244395.1	Lacticaseibacillus paracasei	L9	SAMN03853751	2006-10-30	China: village Bama, guangxi	Homo sapiens	472	0	0	1	1.00
73	GCA_018064185.1	Lacticaseibacillus paracasei	HM1	SAMN18644302	2015	India:Punjab	-	472	0	0	1	1.00
74	GCA_026967245.1	Lacticaseibacillus paracasei	Lpc_yogurt_B6	SAMN32062179	2021-07-27	USA:Chicago	-	472	0	0	2	2.00
75	GCA_039615415.1	Lacticaseibacillus paracasei	TBM 27	SAMN41068605	2015-10	Viet Nam: Bac Giang	-	472	0	0	2	2.00
76	GCA_041117985.1	Lacticaseibacillus paracasei	MYA5	SAMN42930119	2022-10-21	South Korea: Gwangju	-	472	0	0	1	1.00
77	GCA_041679805.1	Lacticaseibacillus paracasei	APY	SAMN41163063	2021	Germany	Homo sapiens	472	0	0	2	2.00
78	GCA_009996805.1	Lacticaseibacillus paracasei	D3-5	SAMN13905290	2018-01-10	USA	Homo sapiens	473	0	0	2	2.00
79	GCA_026967195.1	Lacticaseibacillus paracasei	Lpc_yogurt_B5	SAMN32062178	2021-07-27	USA:Chicago	-	473	0	0	2	2.00
80	GCA_026967205.1	Lacticaseibacillus paracasei	Lpc_yogurt_B4	SAMN32062177	2021-07-27	USA:Chicago	-	473	0	0	2	2.00
81	GCA_026967275.1	Lacticaseibacillus paracasei	Lpc_yogurt_B3	SAMN32062176	2021-07-27	USA:Chicago	-	473	0	0	2	2.00
82	GCA_026967295.1	Lacticaseibacillus paracasei	Lpc_yogurt_B2	SAMN32062175	2021-07-27	USA:Chicago	-	473	0	0	2	2.00
83	GCA_017638905.1	Lacticaseibacillus paracasei	HL182	SAMN18236778	2005	South Korea	Homo sapiens	474	0	0	1	1.00
84	GCA_000410455.1	Lacticaseibacillus paracasei subsp. paracasei Lpp43	Lpp43	SAMN02469725	1995	-	-	476	0	0	2	2.00
85	GCA_003966835.1	Lacticaseibacillus paracasei	-	SAMD00094822	-	-	-	476	0	0	1	1.00
86	GCA_000410195.1	Lacticaseibacillus paracasei subsp. paracasei Lpp219	Lpp219	SAMN02469710	2008	-	Homo sapiens	478	0	0	2	2.00
87	GCA_030480425.1	Lacticaseibacillus paracasei	L14	SAMN33263285	2009-12-01	China: Shanghai	-	478	0	0	1	1.00
88	GCA_026013725.1	Lacticaseibacillus paracasei	ATG-E1	SAMN31433209	2016-01-07	South Korea: Deajeon	Hono sapiens	480	0	0	1	1.00
89	GCA_046939035.1	Lacticaseibacillus paracasei subsp. paracasei	M587A	SAMN35847929	2019	Czech Republic	wild boar	483	0	0	2	2.00
90	GCA_003640765.1	Lacticaseibacillus paracasei	UBLPC-35	SAMN10147909	2008-09-26	India:Hyderabad	-	490	0	0	0	0.00
91	GCA_028993835.1	Lacticaseibacillus paracasei	ARN1	SAMN33449985	2021-08-01	Turkey:Ankara	bacteria	493	0	0	2	2.00
92	GCA_036430865.1	Lacticaseibacillus paracasei	FI11579	SAMN33193087	2018-01	Ghana:Tamale	-	493	0	0	2	2.00
93	GCA_025190525.1	Lacticaseibacillus paracasei	CIRM-BIA 1517	SAMN10365450	2012	France	-	494	0	0	2	2.00
94	GCA_007637635.1	Lacticaseibacillus paracasei	NJ	SAMN12319598	2013-06-12	China:Hubei	-	495	0	0	1	1.00
95	GCA_029625355.1	Lacticaseibacillus paracasei	VHProbi OF10	SAMN26144441	2021-01-25	China:Qingdao	-	495	0	0	1	1.00
96	GCA_035330705.1	Lacticaseibacillus paracasei	S135-24W	SAMN38650142	2022	Taiwan	Homo sapiens	499	0	0	1	1.00
97	GCA_008868525.1	Lacticaseibacillus paracasei	BIO5452	SAMN12856540	-	-	-	500	0	0	2	2.00
98	GCA_025190765.1	Lacticaseibacillus paracasei	CIRM-BIA 1511	SAMN10365436	1987	Spain	-	500	0	0	2	2.00
99	GCA_000410055.1	Lacticaseibacillus paracasei subsp. paracasei Lpp227	Lpp227	SAMN02641494	2008	-	Homo sapiens	504	0	0	2	2.00
100	GCA_002406665.1	Lacticaseibacillus paracasei	B3	SAMN07665582	2016-11-07	Canada: Montreal, Quebec	-	506	0	0	2	2.00