GCA_002320565.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKGKNHIDG_30 (original name was: gnl|Prokka|KGKNHIDG_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	RRE-containing	76,952	97,218

gnlProkkaKGKNHIDG_54 (original name was: gnl|Prokka|KGKNHIDG_54)

Region	Type	From	To	Most similar known cluster		Similarity
Region 54.1	RRE-containing	5,285	25,638

Region	Type	From	To	Most similar known cluster	Similarity
Region 30.1	RRE-containing	76,952	97,218
Region 54.1	RRE-containing	5,285	25,638

No secondary metabolite regions were found in these records:: gnlProkkaKGKNHIDG_1 (original name was: gnl|Prokka|KGKNHIDG_1); gnlProkkaKGKNHIDG_2 (original name was: gnl|Prokka|KGKNHIDG_2); gnlProkkaKGKNHIDG_3 (original name was: gnl|Prokka|KGKNHIDG_3); gnlProkkaKGKNHIDG_4 (original name was: gnl|Prokka|KGKNHIDG_4); gnlProkkaKGKNHIDG_5 (original name was: gnl|Prokka|KGKNHIDG_5); gnlProkkaKGKNHIDG_6 (original name was: gnl|Prokka|KGKNHIDG_6); gnlProkkaKGKNHIDG_7 (original name was: gnl|Prokka|KGKNHIDG_7); gnlProkkaKGKNHIDG_8 (original name was: gnl|Prokka|KGKNHIDG_8); gnlProkkaKGKNHIDG_9 (original name was: gnl|Prokka|KGKNHIDG_9); gnlProkkaKGKNHIDG_10 (original name was: gnl|Prokka|KGKNHIDG_10); gnlProkkaKGKNHIDG_11 (original name was: gnl|Prokka|KGKNHIDG_11); gnlProkkaKGKNHIDG_12 (original name was: gnl|Prokka|KGKNHIDG_12); gnlProkkaKGKNHIDG_13 (original name was: gnl|Prokka|KGKNHIDG_13); gnlProkkaKGKNHIDG_14 (original name was: gnl|Prokka|KGKNHIDG_14); gnlProkkaKGKNHIDG_15 (original name was: gnl|Prokka|KGKNHIDG_15); gnlProkkaKGKNHIDG_16 (original name was: gnl|Prokka|KGKNHIDG_16); gnlProkkaKGKNHIDG_17 (original name was: gnl|Prokka|KGKNHIDG_17); gnlProkkaKGKNHIDG_18 (original name was: gnl|Prokka|KGKNHIDG_18); gnlProkkaKGKNHIDG_19 (original name was: gnl|Prokka|KGKNHIDG_19); gnlProkkaKGKNHIDG_20 (original name was: gnl|Prokka|KGKNHIDG_20); gnlProkkaKGKNHIDG_21 (original name was: gnl|Prokka|KGKNHIDG_21); gnlProkkaKGKNHIDG_22 (original name was: gnl|Prokka|KGKNHIDG_22); gnlProkkaKGKNHIDG_23 (original name was: gnl|Prokka|KGKNHIDG_23); gnlProkkaKGKNHIDG_24 (original name was: gnl|Prokka|KGKNHIDG_24); gnlProkkaKGKNHIDG_25 (original name was: gnl|Prokka|KGKNHIDG_25); gnlProkkaKGKNHIDG_26 (original name was: gnl|Prokka|KGKNHIDG_26); gnlProkkaKGKNHIDG_27 (original name was: gnl|Prokka|KGKNHIDG_27); gnlProkkaKGKNHIDG_28 (original name was: gnl|Prokka|KGKNHIDG_28); gnlProkkaKGKNHIDG_29 (original name was: gnl|Prokka|KGKNHIDG_29); gnlProkkaKGKNHIDG_31 (original name was: gnl|Prokka|KGKNHIDG_31); gnlProkkaKGKNHIDG_32 (original name was: gnl|Prokka|KGKNHIDG_32); gnlProkkaKGKNHIDG_33 (original name was: gnl|Prokka|KGKNHIDG_33); gnlProkkaKGKNHIDG_34 (original name was: gnl|Prokka|KGKNHIDG_34); gnlProkkaKGKNHIDG_35 (original name was: gnl|Prokka|KGKNHIDG_35); gnlProkkaKGKNHIDG_36 (original name was: gnl|Prokka|KGKNHIDG_36); gnlProkkaKGKNHIDG_37 (original name was: gnl|Prokka|KGKNHIDG_37); gnlProkkaKGKNHIDG_38 (original name was: gnl|Prokka|KGKNHIDG_38); gnlProkkaKGKNHIDG_39 (original name was: gnl|Prokka|KGKNHIDG_39); gnlProkkaKGKNHIDG_40 (original name was: gnl|Prokka|KGKNHIDG_40); gnlProkkaKGKNHIDG_41 (original name was: gnl|Prokka|KGKNHIDG_41); gnlProkkaKGKNHIDG_42 (original name was: gnl|Prokka|KGKNHIDG_42); gnlProkkaKGKNHIDG_43 (original name was: gnl|Prokka|KGKNHIDG_43); gnlProkkaKGKNHIDG_44 (original name was: gnl|Prokka|KGKNHIDG_44); gnlProkkaKGKNHIDG_45 (original name was: gnl|Prokka|KGKNHIDG_45); gnlProkkaKGKNHIDG_46 (original name was: gnl|Prokka|KGKNHIDG_46); gnlProkkaKGKNHIDG_47 (original name was: gnl|Prokka|KGKNHIDG_47); gnlProkkaKGKNHIDG_48 (original name was: gnl|Prokka|KGKNHIDG_48); gnlProkkaKGKNHIDG_49 (original name was: gnl|Prokka|KGKNHIDG_49); gnlProkkaKGKNHIDG_50 (original name was: gnl|Prokka|KGKNHIDG_50); gnlProkkaKGKNHIDG_51 (original name was: gnl|Prokka|KGKNHIDG_51); gnlProkkaKGKNHIDG_52 (original name was: gnl|Prokka|KGKNHIDG_52); gnlProkkaKGKNHIDG_53 (original name was: gnl|Prokka|KGKNHIDG_53); gnlProkkaKGKNHIDG_55 (original name was: gnl|Prokka|KGKNHIDG_55); gnlProkkaKGKNHIDG_56 (original name was: gnl|Prokka|KGKNHIDG_56); gnlProkkaKGKNHIDG_57 (original name was: gnl|Prokka|KGKNHIDG_57); gnlProkkaKGKNHIDG_58 (original name was: gnl|Prokka|KGKNHIDG_58)

Compact view

gnlProkkaKGKNHIDG_30 - Region 1 - RRE-containing

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Location: 76,952 - 97,218 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKGKNHIDG_54 - Region 1 - RRE-containing

Download region GenBank file

Download region SVG

Location: 5,285 - 25,638 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.