GCA_002370965.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOOBMFELP_1 (original name was: gnl|Prokka|OOBMFELP_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	352,207	364,357

gnlProkkaOOBMFELP_2 (original name was: gnl|Prokka|OOBMFELP_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T3PKS	78,407	119,576

gnlProkkaOOBMFELP_8 (original name was: gnl|Prokka|OOBMFELP_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	terpene	77,186	92,855

gnlProkkaOOBMFELP_10 (original name was: gnl|Prokka|OOBMFELP_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	cyclic-lactone-autoinducer	227,498	248,203

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	352,207	364,357
Region 2.1	T3PKS	78,407	119,576
Region 8.1	terpene	77,186	92,855
Region 10.1	cyclic-lactone-autoinducer	227,498	248,203

No secondary metabolite regions were found in these records:: gnlProkkaOOBMFELP_3 (original name was: gnl|Prokka|OOBMFELP_3); gnlProkkaOOBMFELP_4 (original name was: gnl|Prokka|OOBMFELP_4); gnlProkkaOOBMFELP_5 (original name was: gnl|Prokka|OOBMFELP_5); gnlProkkaOOBMFELP_6 (original name was: gnl|Prokka|OOBMFELP_6); gnlProkkaOOBMFELP_7 (original name was: gnl|Prokka|OOBMFELP_7); gnlProkkaOOBMFELP_9 (original name was: gnl|Prokka|OOBMFELP_9); gnlProkkaOOBMFELP_11 (original name was: gnl|Prokka|OOBMFELP_11); gnlProkkaOOBMFELP_13 (original name was: gnl|Prokka|OOBMFELP_13); gnlProkkaOOBMFELP_15 (original name was: gnl|Prokka|OOBMFELP_15); gnlProkkaOOBMFELP_16 (original name was: gnl|Prokka|OOBMFELP_16); gnlProkkaOOBMFELP_17 (original name was: gnl|Prokka|OOBMFELP_17); gnlProkkaOOBMFELP_18 (original name was: gnl|Prokka|OOBMFELP_18); gnlProkkaOOBMFELP_22 (original name was: gnl|Prokka|OOBMFELP_22); gnlProkkaOOBMFELP_23 (original name was: gnl|Prokka|OOBMFELP_23); gnlProkkaOOBMFELP_24 (original name was: gnl|Prokka|OOBMFELP_24); gnlProkkaOOBMFELP_25 (original name was: gnl|Prokka|OOBMFELP_25); gnlProkkaOOBMFELP_26 (original name was: gnl|Prokka|OOBMFELP_26); gnlProkkaOOBMFELP_27 (original name was: gnl|Prokka|OOBMFELP_27); gnlProkkaOOBMFELP_28 (original name was: gnl|Prokka|OOBMFELP_28)

Compact view

gnlProkkaOOBMFELP_1 - Region 1 - RiPP-like

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Location: 352,207 - 364,357 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOOBMFELP_2 - Region 1 - T3PKS

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Location: 78,407 - 119,576 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOOBMFELP_8 - Region 1 - terpene

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Location: 77,186 - 92,855 nt. (total: 15,670 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOOBMFELP_10 - Region 1 - cyclic-lactone-autoinducer

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Location: 227,498 - 248,203 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.