GCA_002631775.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGOEDKEFA_11 (original name was: gnl|Prokka|GOEDKEFA_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	cyclic-lactone-autoinducer	110,782	131,487

gnlProkkaGOEDKEFA_12 (original name was: gnl|Prokka|GOEDKEFA_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	terpene	77,259	92,992

gnlProkkaGOEDKEFA_22 (original name was: gnl|Prokka|GOEDKEFA_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RiPP-like	101,330	113,480

gnlProkkaGOEDKEFA_31 (original name was: gnl|Prokka|GOEDKEFA_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	T3PKS	78,473	104,013

Region	Type	From	To	Similarity
Region 8.1	cyclic-lactone-autoinducer	110,782	131,487
Region 9.1	terpene	77,259	92,992
Region 19.1	RiPP-like	101,330	113,480
Region 26.1	T3PKS	78,473	104,013

No secondary metabolite regions were found in these records:: gnlProkkaGOEDKEFA_1 (original name was: gnl|Prokka|GOEDKEFA_1); gnlProkkaGOEDKEFA_2 (original name was: gnl|Prokka|GOEDKEFA_2); gnlProkkaGOEDKEFA_3 (original name was: gnl|Prokka|GOEDKEFA_3); gnlProkkaGOEDKEFA_4 (original name was: gnl|Prokka|GOEDKEFA_4); gnlProkkaGOEDKEFA_6 (original name was: gnl|Prokka|GOEDKEFA_6); gnlProkkaGOEDKEFA_7 (original name was: gnl|Prokka|GOEDKEFA_7); gnlProkkaGOEDKEFA_10 (original name was: gnl|Prokka|GOEDKEFA_10); gnlProkkaGOEDKEFA_13 (original name was: gnl|Prokka|GOEDKEFA_13); gnlProkkaGOEDKEFA_14 (original name was: gnl|Prokka|GOEDKEFA_14); gnlProkkaGOEDKEFA_15 (original name was: gnl|Prokka|GOEDKEFA_15); gnlProkkaGOEDKEFA_16 (original name was: gnl|Prokka|GOEDKEFA_16); gnlProkkaGOEDKEFA_17 (original name was: gnl|Prokka|GOEDKEFA_17); gnlProkkaGOEDKEFA_18 (original name was: gnl|Prokka|GOEDKEFA_18); gnlProkkaGOEDKEFA_19 (original name was: gnl|Prokka|GOEDKEFA_19); gnlProkkaGOEDKEFA_20 (original name was: gnl|Prokka|GOEDKEFA_20); gnlProkkaGOEDKEFA_21 (original name was: gnl|Prokka|GOEDKEFA_21); gnlProkkaGOEDKEFA_23 (original name was: gnl|Prokka|GOEDKEFA_23); gnlProkkaGOEDKEFA_24 (original name was: gnl|Prokka|GOEDKEFA_24); gnlProkkaGOEDKEFA_25 (original name was: gnl|Prokka|GOEDKEFA_25); gnlProkkaGOEDKEFA_28 (original name was: gnl|Prokka|GOEDKEFA_28); gnlProkkaGOEDKEFA_29 (original name was: gnl|Prokka|GOEDKEFA_29); gnlProkkaGOEDKEFA_30 (original name was: gnl|Prokka|GOEDKEFA_30); gnlProkkaGOEDKEFA_32 (original name was: gnl|Prokka|GOEDKEFA_32); gnlProkkaGOEDKEFA_33 (original name was: gnl|Prokka|GOEDKEFA_33); gnlProkkaGOEDKEFA_35 (original name was: gnl|Prokka|GOEDKEFA_35); gnlProkkaGOEDKEFA_42 (original name was: gnl|Prokka|GOEDKEFA_42); gnlProkkaGOEDKEFA_62 (original name was: gnl|Prokka|GOEDKEFA_62)

Compact view

gnlProkkaGOEDKEFA_11 - Region 1 - cyclic-lactone-autoinducer

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Location: 110,782 - 131,487 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGOEDKEFA_12 - Region 1 - terpene

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Location: 77,259 - 92,992 nt. (total: 15,734 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGOEDKEFA_22 - Region 1 - RiPP-like

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Location: 101,330 - 113,480 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGOEDKEFA_31 - Region 1 - T3PKS

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Location: 78,473 - 104,013 nt. (total: 25,541 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.