GCA_002737965.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIPODCAKF_1 (original name was: gnl|Prokka|IPODCAKF_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	cyclic-lactone-autoinducer	8,464	29,169	auriculamide	NRP	9%

gnlProkkaIPODCAKF_3 (original name was: gnl|Prokka|IPODCAKF_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	terpene	71,939	92,820

gnlProkkaIPODCAKF_9 (original name was: gnl|Prokka|IPODCAKF_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	33,055	44,968

gnlProkkaIPODCAKF_34 (original name was: gnl|Prokka|IPODCAKF_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	T3PKS	131,160	156,851

No secondary metabolite regions were found in these records:: gnlProkkaIPODCAKF_2 (original name was: gnl|Prokka|IPODCAKF_2); gnlProkkaIPODCAKF_4 (original name was: gnl|Prokka|IPODCAKF_4); gnlProkkaIPODCAKF_5 (original name was: gnl|Prokka|IPODCAKF_5); gnlProkkaIPODCAKF_6 (original name was: gnl|Prokka|IPODCAKF_6); gnlProkkaIPODCAKF_7 (original name was: gnl|Prokka|IPODCAKF_7); gnlProkkaIPODCAKF_8 (original name was: gnl|Prokka|IPODCAKF_8); gnlProkkaIPODCAKF_10 (original name was: gnl|Prokka|IPODCAKF_10); gnlProkkaIPODCAKF_11 (original name was: gnl|Prokka|IPODCAKF_11); gnlProkkaIPODCAKF_12 (original name was: gnl|Prokka|IPODCAKF_12); gnlProkkaIPODCAKF_13 (original name was: gnl|Prokka|IPODCAKF_13); gnlProkkaIPODCAKF_14 (original name was: gnl|Prokka|IPODCAKF_14); gnlProkkaIPODCAKF_15 (original name was: gnl|Prokka|IPODCAKF_15); gnlProkkaIPODCAKF_16 (original name was: gnl|Prokka|IPODCAKF_16); gnlProkkaIPODCAKF_17 (original name was: gnl|Prokka|IPODCAKF_17); gnlProkkaIPODCAKF_18 (original name was: gnl|Prokka|IPODCAKF_18); gnlProkkaIPODCAKF_19 (original name was: gnl|Prokka|IPODCAKF_19); gnlProkkaIPODCAKF_20 (original name was: gnl|Prokka|IPODCAKF_20); gnlProkkaIPODCAKF_21 (original name was: gnl|Prokka|IPODCAKF_21); gnlProkkaIPODCAKF_22 (original name was: gnl|Prokka|IPODCAKF_22); gnlProkkaIPODCAKF_23 (original name was: gnl|Prokka|IPODCAKF_23); gnlProkkaIPODCAKF_24 (original name was: gnl|Prokka|IPODCAKF_24); gnlProkkaIPODCAKF_25 (original name was: gnl|Prokka|IPODCAKF_25); gnlProkkaIPODCAKF_26 (original name was: gnl|Prokka|IPODCAKF_26); gnlProkkaIPODCAKF_27 (original name was: gnl|Prokka|IPODCAKF_27); gnlProkkaIPODCAKF_28 (original name was: gnl|Prokka|IPODCAKF_28); gnlProkkaIPODCAKF_29 (original name was: gnl|Prokka|IPODCAKF_29); gnlProkkaIPODCAKF_30 (original name was: gnl|Prokka|IPODCAKF_30); gnlProkkaIPODCAKF_31 (original name was: gnl|Prokka|IPODCAKF_31); gnlProkkaIPODCAKF_32 (original name was: gnl|Prokka|IPODCAKF_32); gnlProkkaIPODCAKF_33 (original name was: gnl|Prokka|IPODCAKF_33); gnlProkkaIPODCAKF_35 (original name was: gnl|Prokka|IPODCAKF_35); gnlProkkaIPODCAKF_36 (original name was: gnl|Prokka|IPODCAKF_36); gnlProkkaIPODCAKF_37 (original name was: gnl|Prokka|IPODCAKF_37); gnlProkkaIPODCAKF_38 (original name was: gnl|Prokka|IPODCAKF_38); gnlProkkaIPODCAKF_39 (original name was: gnl|Prokka|IPODCAKF_39); gnlProkkaIPODCAKF_40 (original name was: gnl|Prokka|IPODCAKF_40); gnlProkkaIPODCAKF_41 (original name was: gnl|Prokka|IPODCAKF_41); gnlProkkaIPODCAKF_45 (original name was: gnl|Prokka|IPODCAKF_45); gnlProkkaIPODCAKF_56 (original name was: gnl|Prokka|IPODCAKF_56); gnlProkkaIPODCAKF_67 (original name was: gnl|Prokka|IPODCAKF_67); gnlProkkaIPODCAKF_71 (original name was: gnl|Prokka|IPODCAKF_71); gnlProkkaIPODCAKF_72 (original name was: gnl|Prokka|IPODCAKF_72)

Compact view

gnlProkkaIPODCAKF_1 - Region 1 - cyclic-lactone-autoinducer

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Location: 8,464 - 29,169 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaIPODCAKF_3 - Region 1 - terpene

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Location: 71,939 - 92,820 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIPODCAKF_9 - Region 1 - RiPP-like

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Location: 33,055 - 44,968 nt. (total: 11,914 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIPODCAKF_34 - Region 1 - T3PKS

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Location: 131,160 - 156,851 nt. (total: 25,692 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.