GCA_002738055.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIOPGJEEI_1 (original name was: gnl|Prokka|IOPGJEEI_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	1	25,545

gnlProkkaIOPGJEEI_9 (original name was: gnl|Prokka|IOPGJEEI_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	33,052	45,202

gnlProkkaIOPGJEEI_67 (original name was: gnl|Prokka|IOPGJEEI_67)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	cyclic-lactone-autoinducer	120,995	141,700

gnlProkkaIOPGJEEI_68 (original name was: gnl|Prokka|IOPGJEEI_68)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	terpene	71,946	92,827

Region	Type	From	To	Similarity
Region 1.1	T3PKS	1	25,545
Region 9.1	RiPP-like	33,052	45,202
Region 41.1	cyclic-lactone-autoinducer	120,995	141,700
Region 42.1	terpene	71,946	92,827

No secondary metabolite regions were found in these records:: gnlProkkaIOPGJEEI_2 (original name was: gnl|Prokka|IOPGJEEI_2); gnlProkkaIOPGJEEI_3 (original name was: gnl|Prokka|IOPGJEEI_3); gnlProkkaIOPGJEEI_4 (original name was: gnl|Prokka|IOPGJEEI_4); gnlProkkaIOPGJEEI_5 (original name was: gnl|Prokka|IOPGJEEI_5); gnlProkkaIOPGJEEI_6 (original name was: gnl|Prokka|IOPGJEEI_6); gnlProkkaIOPGJEEI_7 (original name was: gnl|Prokka|IOPGJEEI_7); gnlProkkaIOPGJEEI_8 (original name was: gnl|Prokka|IOPGJEEI_8); gnlProkkaIOPGJEEI_10 (original name was: gnl|Prokka|IOPGJEEI_10); gnlProkkaIOPGJEEI_11 (original name was: gnl|Prokka|IOPGJEEI_11); gnlProkkaIOPGJEEI_12 (original name was: gnl|Prokka|IOPGJEEI_12); gnlProkkaIOPGJEEI_13 (original name was: gnl|Prokka|IOPGJEEI_13); gnlProkkaIOPGJEEI_14 (original name was: gnl|Prokka|IOPGJEEI_14); gnlProkkaIOPGJEEI_15 (original name was: gnl|Prokka|IOPGJEEI_15); gnlProkkaIOPGJEEI_16 (original name was: gnl|Prokka|IOPGJEEI_16); gnlProkkaIOPGJEEI_17 (original name was: gnl|Prokka|IOPGJEEI_17); gnlProkkaIOPGJEEI_18 (original name was: gnl|Prokka|IOPGJEEI_18); gnlProkkaIOPGJEEI_19 (original name was: gnl|Prokka|IOPGJEEI_19); gnlProkkaIOPGJEEI_20 (original name was: gnl|Prokka|IOPGJEEI_20); gnlProkkaIOPGJEEI_21 (original name was: gnl|Prokka|IOPGJEEI_21); gnlProkkaIOPGJEEI_22 (original name was: gnl|Prokka|IOPGJEEI_22); gnlProkkaIOPGJEEI_23 (original name was: gnl|Prokka|IOPGJEEI_23); gnlProkkaIOPGJEEI_24 (original name was: gnl|Prokka|IOPGJEEI_24); gnlProkkaIOPGJEEI_25 (original name was: gnl|Prokka|IOPGJEEI_25); gnlProkkaIOPGJEEI_26 (original name was: gnl|Prokka|IOPGJEEI_26); gnlProkkaIOPGJEEI_27 (original name was: gnl|Prokka|IOPGJEEI_27); gnlProkkaIOPGJEEI_28 (original name was: gnl|Prokka|IOPGJEEI_28); gnlProkkaIOPGJEEI_29 (original name was: gnl|Prokka|IOPGJEEI_29); gnlProkkaIOPGJEEI_30 (original name was: gnl|Prokka|IOPGJEEI_30); gnlProkkaIOPGJEEI_31 (original name was: gnl|Prokka|IOPGJEEI_31); gnlProkkaIOPGJEEI_32 (original name was: gnl|Prokka|IOPGJEEI_32); gnlProkkaIOPGJEEI_33 (original name was: gnl|Prokka|IOPGJEEI_33); gnlProkkaIOPGJEEI_34 (original name was: gnl|Prokka|IOPGJEEI_34); gnlProkkaIOPGJEEI_35 (original name was: gnl|Prokka|IOPGJEEI_35); gnlProkkaIOPGJEEI_36 (original name was: gnl|Prokka|IOPGJEEI_36); gnlProkkaIOPGJEEI_37 (original name was: gnl|Prokka|IOPGJEEI_37); gnlProkkaIOPGJEEI_45 (original name was: gnl|Prokka|IOPGJEEI_45); gnlProkkaIOPGJEEI_56 (original name was: gnl|Prokka|IOPGJEEI_56); gnlProkkaIOPGJEEI_66 (original name was: gnl|Prokka|IOPGJEEI_66)

Compact view

gnlProkkaIOPGJEEI_1 - Region 1 - T3PKS

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Location: 1 - 25,545 nt. (total: 25,545 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIOPGJEEI_9 - Region 1 - RiPP-like

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Location: 33,052 - 45,202 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIOPGJEEI_67 - Region 1 - cyclic-lactone-autoinducer

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Location: 120,995 - 141,700 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIOPGJEEI_68 - Region 1 - terpene

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Location: 71,946 - 92,827 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.