GCA_002750695.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaINGGAAHG_5 (original name was: gnl|Prokka|INGGAAHG_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	101,601	110,648

gnlProkkaINGGAAHG_14 (original name was: gnl|Prokka|INGGAAHG_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	T3PKS	237,266	265,708

gnlProkkaINGGAAHG_17 (original name was: gnl|Prokka|INGGAAHG_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	terpene	29,731	50,612

gnlProkkaINGGAAHG_23 (original name was: gnl|Prokka|INGGAAHG_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	cyclic-lactone-autoinducer	218,006	234,000

Region	Type	From	To	Similarity
Region 5.1	RiPP-like	101,601	110,648
Region 14.1	T3PKS	237,266	265,708
Region 17.1	terpene	29,731	50,612
Region 23.1	cyclic-lactone-autoinducer	218,006	234,000

No secondary metabolite regions were found in these records:: gnlProkkaINGGAAHG_1 (original name was: gnl|Prokka|INGGAAHG_1); gnlProkkaINGGAAHG_2 (original name was: gnl|Prokka|INGGAAHG_2); gnlProkkaINGGAAHG_3 (original name was: gnl|Prokka|INGGAAHG_3); gnlProkkaINGGAAHG_4 (original name was: gnl|Prokka|INGGAAHG_4); gnlProkkaINGGAAHG_6 (original name was: gnl|Prokka|INGGAAHG_6); gnlProkkaINGGAAHG_7 (original name was: gnl|Prokka|INGGAAHG_7); gnlProkkaINGGAAHG_8 (original name was: gnl|Prokka|INGGAAHG_8); gnlProkkaINGGAAHG_9 (original name was: gnl|Prokka|INGGAAHG_9); gnlProkkaINGGAAHG_10 (original name was: gnl|Prokka|INGGAAHG_10); gnlProkkaINGGAAHG_11 (original name was: gnl|Prokka|INGGAAHG_11); gnlProkkaINGGAAHG_12 (original name was: gnl|Prokka|INGGAAHG_12); gnlProkkaINGGAAHG_13 (original name was: gnl|Prokka|INGGAAHG_13); gnlProkkaINGGAAHG_15 (original name was: gnl|Prokka|INGGAAHG_15); gnlProkkaINGGAAHG_16 (original name was: gnl|Prokka|INGGAAHG_16); gnlProkkaINGGAAHG_18 (original name was: gnl|Prokka|INGGAAHG_18); gnlProkkaINGGAAHG_19 (original name was: gnl|Prokka|INGGAAHG_19); gnlProkkaINGGAAHG_20 (original name was: gnl|Prokka|INGGAAHG_20); gnlProkkaINGGAAHG_21 (original name was: gnl|Prokka|INGGAAHG_21); gnlProkkaINGGAAHG_22 (original name was: gnl|Prokka|INGGAAHG_22); gnlProkkaINGGAAHG_24 (original name was: gnl|Prokka|INGGAAHG_24); gnlProkkaINGGAAHG_25 (original name was: gnl|Prokka|INGGAAHG_25); gnlProkkaINGGAAHG_26 (original name was: gnl|Prokka|INGGAAHG_26); gnlProkkaINGGAAHG_27 (original name was: gnl|Prokka|INGGAAHG_27); gnlProkkaINGGAAHG_28 (original name was: gnl|Prokka|INGGAAHG_28); gnlProkkaINGGAAHG_29 (original name was: gnl|Prokka|INGGAAHG_29); gnlProkkaINGGAAHG_30 (original name was: gnl|Prokka|INGGAAHG_30); gnlProkkaINGGAAHG_31 (original name was: gnl|Prokka|INGGAAHG_31); gnlProkkaINGGAAHG_32 (original name was: gnl|Prokka|INGGAAHG_32); gnlProkkaINGGAAHG_33 (original name was: gnl|Prokka|INGGAAHG_33); gnlProkkaINGGAAHG_34 (original name was: gnl|Prokka|INGGAAHG_34); gnlProkkaINGGAAHG_35 (original name was: gnl|Prokka|INGGAAHG_35); gnlProkkaINGGAAHG_36 (original name was: gnl|Prokka|INGGAAHG_36); gnlProkkaINGGAAHG_37 (original name was: gnl|Prokka|INGGAAHG_37); gnlProkkaINGGAAHG_38 (original name was: gnl|Prokka|INGGAAHG_38); gnlProkkaINGGAAHG_39 (original name was: gnl|Prokka|INGGAAHG_39); gnlProkkaINGGAAHG_40 (original name was: gnl|Prokka|INGGAAHG_40); gnlProkkaINGGAAHG_41 (original name was: gnl|Prokka|INGGAAHG_41); gnlProkkaINGGAAHG_42 (original name was: gnl|Prokka|INGGAAHG_42); gnlProkkaINGGAAHG_43 (original name was: gnl|Prokka|INGGAAHG_43); gnlProkkaINGGAAHG_44 (original name was: gnl|Prokka|INGGAAHG_44); gnlProkkaINGGAAHG_45 (original name was: gnl|Prokka|INGGAAHG_45); gnlProkkaINGGAAHG_46 (original name was: gnl|Prokka|INGGAAHG_46); gnlProkkaINGGAAHG_47 (original name was: gnl|Prokka|INGGAAHG_47); gnlProkkaINGGAAHG_48 (original name was: gnl|Prokka|INGGAAHG_48); gnlProkkaINGGAAHG_49 (original name was: gnl|Prokka|INGGAAHG_49); gnlProkkaINGGAAHG_50 (original name was: gnl|Prokka|INGGAAHG_50); gnlProkkaINGGAAHG_51 (original name was: gnl|Prokka|INGGAAHG_51); gnlProkkaINGGAAHG_52 (original name was: gnl|Prokka|INGGAAHG_52); gnlProkkaINGGAAHG_53 (original name was: gnl|Prokka|INGGAAHG_53); gnlProkkaINGGAAHG_54 (original name was: gnl|Prokka|INGGAAHG_54); gnlProkkaINGGAAHG_55 (original name was: gnl|Prokka|INGGAAHG_55); gnlProkkaINGGAAHG_56 (original name was: gnl|Prokka|INGGAAHG_56); gnlProkkaINGGAAHG_57 (original name was: gnl|Prokka|INGGAAHG_57); gnlProkkaINGGAAHG_58 (original name was: gnl|Prokka|INGGAAHG_58); gnlProkkaINGGAAHG_59 (original name was: gnl|Prokka|INGGAAHG_59); gnlProkkaINGGAAHG_60 (original name was: gnl|Prokka|INGGAAHG_60); gnlProkkaINGGAAHG_61 (original name was: gnl|Prokka|INGGAAHG_61); gnlProkkaINGGAAHG_62 (original name was: gnl|Prokka|INGGAAHG_62); gnlProkkaINGGAAHG_63 (original name was: gnl|Prokka|INGGAAHG_63); gnlProkkaINGGAAHG_64 (original name was: gnl|Prokka|INGGAAHG_64); gnlProkkaINGGAAHG_65 (original name was: gnl|Prokka|INGGAAHG_65); gnlProkkaINGGAAHG_66 (original name was: gnl|Prokka|INGGAAHG_66); gnlProkkaINGGAAHG_67 (original name was: gnl|Prokka|INGGAAHG_67); gnlProkkaINGGAAHG_68 (original name was: gnl|Prokka|INGGAAHG_68); gnlProkkaINGGAAHG_69 (original name was: gnl|Prokka|INGGAAHG_69)

Compact view

gnlProkkaINGGAAHG_5 - Region 1 - RiPP-like

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Location: 101,601 - 110,648 nt. (total: 9,048 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaINGGAAHG_14 - Region 1 - T3PKS

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Location: 237,266 - 265,708 nt. (total: 28,443 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaINGGAAHG_17 - Region 1 - terpene

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Location: 29,731 - 50,612 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaINGGAAHG_23 - Region 1 - cyclic-lactone-autoinducer

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Location: 218,006 - 234,000 nt. (total: 15,995 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.