Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_002796705.1	Streptococcus thermophilus	St-2	SAMN08049010	2010	Spain:Asturias	-	0	1	25	32	40.62
2	GCA_002796635.1	Streptococcus thermophilus	St-9	SAMN08049013	2010	Spain:Asturias	-	298	1	23	31	38.61
3	GCA_019450135.1	Streptococcus thermophilus	Douc24	SAMN19836733	2020-11-09	Ireland	-	302	5	24	33	41.11
4	GCA_019450055.1	Streptococcus thermophilus	Roque89	SAMN19836731	2020-11-09	Ireland	-	323	1	23	32	39.42
5	GCA_042649985.1	Streptococcus thermophilus	CCUG 21957	SAMN43282004	2021	-	-	455	0	29	34	44.69
6	GCA_015190465.1	Streptococcus thermophilus	TK-P3A	SAMN13106279	2019-02-26	China:Zhejiang province	-	456	0	28	28	39.60
7	GCA_004354505.1	Streptococcus thermophilus	ATCC 19258	SAMN08493372	2017	Denmark	-	460	0	29	34	44.69
8	GCA_900474985.1	Streptococcus thermophilus	NCTC12958	SAMEA3594354	1900/2007	-	-	461	0	29	30	41.73
9	GCA_020736685.1	Streptococcus thermophilus LMD-9	FDAARGOS_1574	SAMN22091671	-	USA: Silver Spring	-	462	0	29	30	41.73
10	GCA_002796625.1	Streptococcus thermophilus	St-5	SAMN08049011	2010	Spain:Asturias	-	475	1	28	33	43.29
11	GCA_000521265.1	Streptococcus thermophilus M17PTZA496	M17PTZA496	SAMN02437282	1996-02-15	Italy: Valle d'Aosta	-	476	1	30	29	41.74
12	GCA_002796655.1	Streptococcus thermophilus	St-6	SAMN08049012	2010	Spain:Asturias	-	476	1	28	33	43.29
13	GCA_019449965.1	Streptococcus thermophilus	Racle124	SAMN19136544	2020-11-09	Ireland	-	476	0	28	33	43.28
14	GCA_027854415.1	Streptococcus thermophilus	4242	SAMN32632016	2020-07	Turkey	-	560	1	30	31	43.15
15	GCA_027944095.1	Streptococcus thermophilus	TSGB 4254	SAMN32339324	2020-07	Turkey	-	565	1	24	27	36.14
16	GCA_011801285.1	Streptococcus thermophilus	ST64987	SAMN12743474	2012-11	Netherlands	-	723	0	19	28	33.84
17	GCA_002796645.1	Streptococcus thermophilus	St-10	SAMN08049014	2010	Spain:Asturias	-	727	0	25	33	41.40
18	GCA_000572095.1	Streptococcus thermophilus TH1477	TH1477	SAMN02442661	2012-11-14	Italy: Veneto	-	732	0	23	29	37.01
19	GCA_020076005.1	Streptococcus thermophilus	DS03_14	SAMN15078662	2018-03-12	USA:MD	Homo sapiens	741	0	25	33	41.40
20	GCA_020076175.1	Streptococcus thermophilus	CF12_14	SAMN15078601	2018-03-12	USA:MD	Homo sapiens	741	0	25	32	40.61
21	GCA_009856565.1	Streptococcus thermophilus	EU01	SAMN13618337	2018-04-18	China: tianjin	Homo sapiens	742	0	25	28	37.54
22	GCA_036867615.1	Streptococcus thermophilus	St 18.1	SAMN39095004	2021-04-01	Spain: Asturias	-	745	0	23	33	40.22
23	GCA_036867635.1	Streptococcus thermophilus	St 8.1	SAMN39095002	2021-04-01	Spain: Asturias	-	745	0	23	32	39.41
24	GCA_020404245.1	Streptococcus thermophilus	ST13	SAMN21924265	2020-08-06	USA: Oregon	-	747	0	25	33	41.40
25	GCA_020404305.1	Streptococcus thermophilus	ST1	SAMN21924261	2020-08-06	USA: Oregon	-	747	0	25	33	41.40
26	GCA_020404325.1	Streptococcus thermophilus	ST11	SAMN21924264	2020-08-06	USA: Oregon	-	747	0	25	33	41.40
27	GCA_025186385.1	Streptococcus thermophilus	CIRM-BIA 1864	SAMN10365668	1962	Italy	-	748	0	27	32	41.87
28	GCA_025187605.1	Streptococcus thermophilus	CIRM-BIA 1360	SAMN10365629	1962	Italy	-	748	0	27	32	41.87
29	GCA_029523265.1	Streptococcus thermophilus	MGA45-4	SAMN26185813	2009	China:Hohhot	-	748	0	26	33	42.01
30	GCA_039783405.1	Streptococcus thermophilus	ST19	SAMN16933243	1995	Ireland	-	748	0	19	29	34.67
31	GCA_039783635.1	Streptococcus thermophilus	CNRZ1575	SAMN16933248	1995	Ireland	-	748	0	27	28	38.90
32	GCA_018966905.1	Streptococcus thermophilus	159	SAMN19670538	2004-09-16	Russia: Caucasus	-	749	0	27	33	42.64
33	GCA_019450065.1	Streptococcus thermophilus	FDL19	SAMN19836727	2020-11-09	Ireland	-	749	0	28	33	43.28
34	GCA_025187615.1	Streptococcus thermophilus	CIRM-BIA 2103	SAMN10365628	1987	Italy	-	749	0	27	32	41.87
35	GCA_034044695.1	Streptococcus thermophilus	KF8	SAMN38411847	2022-09-10	Russia: Moscow	-	749	0	27	33	42.64
36	GCA_036867665.1	Streptococcus thermophilus	St 9.1	SAMN39095003	2021-04-01	Spain: Asturias	-	749	0	25	33	41.40
37	GCA_019449815.1	Streptococcus thermophilus	Brie16	SAMN19116371	2020-11-09	Ireland	-	750	0	27	33	42.64
38	GCA_019449835.1	Streptococcus thermophilus	Moz86	SAMN19116394	2020-11-09	Ireland	-	750	0	28	33	43.28
39	GCA_019449875.1	Streptococcus thermophilus	Rico66	SAMN19136588	2020-11-09	Ireland	-	750	0	28	33	43.28
40	GCA_025962735.1	Streptococcus thermophilus	UCCSt89	SAMN29795576	2017	Ireland	-	750	0	25	33	41.40
41	GCA_000521285.1	Streptococcus thermophilus TH1435	TH1435	SAMN02401100	2011-04-01	Italy: Friuli Venezia Giulia	-	751	0	28	29	40.31
42	GCA_000698885.1	Streptococcus thermophilus ASCC 1275	ASCC 1275	SAMN02770279	-	Australia: Werribee, Victoria	-	751	0	25	29	38.29
43	GCA_001306395.1	Streptococcus thermophilus	C106	SAMN03801559	2010-07-29	Ireland: Cork Farmers Market	-	751	0	25	33	41.40
44	GCA_001855705.1	Streptococcus thermophilus	ND07	SAMN05357478	2005	China:Tianjun County, Qinhai Province	-	751	0	25	29	38.29
45	GCA_002843115.1	Streptococcus thermophilus	DGCC 7710	SAMN08130366	-	-	-	751	0	25	29	38.29
46	GCA_003130445.1	Streptococcus thermophilus	05-34	SAMN09112352	2010	China: Tibet	-	751	0	25	33	41.40
47	GCA_013307185.1	Streptococcus thermophilus	CS5	SAMN08295147	2013	China	-	751	0	25	29	38.29
48	GCA_013307285.1	Streptococcus thermophilus	CS18	SAMN09635157	2014	China	-	751	0	25	29	38.29
49	GCA_019449955.1	Streptococcus thermophilus	Nect13	SAMN19136543	2020-11-09	Ireland	-	751	0	25	33	41.40
50	GCA_020075925.1	Streptococcus thermophilus	DS14_14	SAMN06464115	2016-07-27	USA:MD	Homo sapiens	751	0	25	33	41.40
51	GCA_023006585.1	Streptococcus thermophilus	ST16	SAMN24807002	2019	Canada:Ottawa	-	751	0	25	32	40.61
52	GCA_023893675.1	Streptococcus thermophilus	16t	SAMN29094259	1982	Georgia: Tbilisi	-	751	0	27	33	42.64
53	GCA_029866985.1	Streptococcus thermophilus	DGCC7710	SAMN32348018	2015-10-09	USA:Georgia	-	751	0	25	29	38.29
54	GCA_036867595.1	Streptococcus thermophilus	St 21.1	SAMN39095005	2021-04-01	Spain: Asturias	-	751	0	25	33	41.40
55	GCA_045159845.1	Streptococcus thermophilus	4134	SAMN16933232	1996	Ireland	-	751	0	25	29	38.29
56	GCA_001008015.1	Streptococcus thermophilus	MN-BM-A02	SAMN03325854	2008	China: Dali region, Yunnan	-	752	0	25	29	38.29
57	GCA_001663795.1	Streptococcus thermophilus	KLDS SM	SAMN05226830	-	China: Inner Mongolia	-	752	0	25	29	38.29
58	GCA_030846755.1	Streptococcus thermophilus	CICC 20372	SAMN36973155	2006-03-31	China: Inner Mongolia	-	752	0	25	29	38.29
59	GCA_000253395.1	Streptococcus thermophilus JIM 8232	JIM 8232	SAMEA2272807	-	-	-	753	0	25	31	39.82
60	GCA_019449935.1	Streptococcus thermophilus	Scam27	SAMN19136546	2020-11-09	Ireland	-	753	0	24	33	40.80
61	GCA_019450035.1	Streptococcus thermophilus	Moz77	SAMN19136542	2020-11-09	Ireland	-	753	0	23	33	40.22
62	GCA_019450115.1	Streptococcus thermophilus	FDL17	SAMN19836728	2020-11-09	Ireland	-	753	0	24	33	40.80
63	GCA_023207975.1	Streptococcus thermophilus	CS6	SAMN14524728	2013-10-10	China	-	753	0	25	29	38.29
64	GCA_027557675.1	Streptococcus thermophilus	EG007	SAMN17736326	2018-03-21	South Korea: Seoul	-	753	0	28	27	38.90
65	GCA_900492165.1	Streptococcus thermophilus	N4L	SAMEA4729876	-	-	-	753	0	23	29	37.01
66	GCA_027944055.1	Streptococcus thermophilus	TSGB 4241	SAMN32339320	2020-07	Turkey	-	754	0	21	33	39.12
67	GCA_002914925.1	Streptococcus thermophilus	BT01	SAMN07187786	2017	Italy	-	755	0	35	32	47.42
68	GCA_019449995.1	Streptococcus thermophilus	Strac42	SAMN19136545	2020-11-09	Ireland	-	755	0	29	33	43.93
69	GCA_019450095.1	Streptococcus thermophilus	Moz76	SAMN19836723	2020-11-09	Ireland	-	755	0	35	33	48.10
70	GCA_020075965.1	Streptococcus thermophilus	DS61_14	SAMN15078830	2019-03-12	USA:MD	Homo sapiens	755	0	35	33	48.10
71	GCA_020076045.1	Streptococcus thermophilus	CF5_14	SAMN15078648	2018-03-12	USA:MD	Homo sapiens	755	0	35	32	47.42
72	GCA_020076065.1	Streptococcus thermophilus	CF8_14	SAMN15078656	2018-03-12	USA:MD	Homo sapiens	755	0	35	33	48.10
73	GCA_020076115.1	Streptococcus thermophilus	CF4_14	SAMN15078639	2018-03-12	USA:MD	Homo sapiens	755	0	35	32	47.42
74	GCA_020076145.1	Streptococcus thermophilus	DS45_14	SAMN15078736	2019-03-12	USA:MD	Homo sapiens	755	0	35	33	48.10
75	GCA_020404275.1	Streptococcus thermophilus	ST10	SAMN21924263	2020-08-09	USA: Oregon	-	755	0	29	33	43.93
76	GCA_024665315.1	Streptococcus thermophilus	TH-4	SAMN29862205	-	-	Homo sapiens	755	0	35	28	44.82
77	GCA_020076365.1	Streptococcus thermophilus	DS51_14	SAMN15078775	2019-03-12	USA:MD	Homo sapiens	756	0	27	33	42.64
78	GCA_020404265.1	Streptococcus thermophilus	ST4	SAMN21924262	2020-08-09	USA: Oregon	-	756	0	29	33	43.93
79	GCA_025187325.1	Streptococcus thermophilus	CIRM-BIA 1046	SAMN10365644	1971	Japan	-	756	0	26	33	42.01
80	GCA_903890795.1	Streptococcus thermophilus	-	SAMEA6957273	1971	Japan	-	756	0	26	29	38.95
81	GCA_000014485.1	Streptococcus thermophilus LMD-9	LMD-9	SAMN02598313	-	-	-	757	0	35	29	45.45
82	GCA_020075945.1	Streptococcus thermophilus	DS30_14	SAMN15078680	2019-03-12	USA:MD	Homo sapiens	757	0	35	33	48.10
83	GCA_025948295.1	Streptococcus thermophilus	CNRZ385	SAMN16933252	1993	Ireland	-	757	0	26	29	38.95
84	GCA_026805425.1	Streptococcus thermophilus	ST30-8	SAMN30276017	-	-	-	757	0	23	33	40.22
85	GCA_027944035.1	Streptococcus thermophilus	TSGB 4242	SAMN32339321	2020-07	Turkey	-	757	0	22	32	38.83
86	GCA_039784555.1	Streptococcus thermophilus	4021	SAMN16933228	1995	Ireland	-	757	0	27	29	39.62
87	GCA_040098105.1	Streptococcus thermophilus	CLA-JM-H39	SAMN40631525	2020-04-28	Germany:Aachen	Homo sapiens	757	0	29	33	43.93
88	GCA_040822555.1	Streptococcus thermophilus	ATA-LTC-Ld120812	SAMN41784240	2012-08-12	Turkey: Istanbul, Sisli	Homo sapiens	757	0	29	33	43.93
89	GCA_040822615.1	Streptococcus thermophilus	ATA-LTC St140700	SAMN41784236	2000-07-14	Turkey: Izmir, Kemalpasa	-	757	0	29	33	43.93
90	GCA_000521325.1	Streptococcus thermophilus MTH17CL396	MTH17CL396	SAMN02437281	1996-02-15	Italy: Valle d'Aosta	-	758	0	22	28	35.61
91	GCA_000971665.1	Streptococcus thermophilus	SMQ-301	SAMN02850632	1996-06	-	-	758	0	27	29	39.62
92	GCA_010500735.1	Streptococcus thermophilus	MV-FAST4	SAMN14001869	2019	Italy	-	758	0	22	33	39.66
93	GCA_019450015.1	Streptococcus thermophilus	Moz74	SAMN19136541	2020-11-09	Ireland	-	758	0	22	33	39.66
94	GCA_020076105.1	Streptococcus thermophilus	DS76_14	SAMN15078890	2019-03-12	USA:MD	Homo sapiens	758	0	35	32	47.42
95	GCA_019449735.1	Streptococcus thermophilus	Moz111	SAMN19116355	2020-11-09	Ireland	-	760	0	30	33	44.60
96	GCA_025187525.1	Streptococcus thermophilus	CIRM-BIA 1362	SAMN10365633	1993	France	-	760	0	25	33	41.40
97	GCA_039784265.1	Streptococcus thermophilus	1A	SAMN16933227	1996	Ireland	-	760	0	27	29	39.62
98	GCA_047947205.1	Streptococcus thermophilus	STMM1	SAMN34598787	2022	Italy	-	761	0	19	28	33.84
99	GCA_047947225.1	Streptococcus thermophilus	STMM3	SAMN34598939	2022	Italy	-	761	0	28	28	39.60
100	GCA_004114735.1	Streptococcus thermophilus	IDCC2201	SAMN10782595	2018-11	South Korea: Hwaseong	-	762	0	27	29	39.62