GCA_003023825.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHJKNJPEF_3 (original name was: gnl|Prokka|HJKNJPEF_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	terpene	29,880	50,761

gnlProkkaHJKNJPEF_11 (original name was: gnl|Prokka|HJKNJPEF_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	1	30,911

gnlProkkaHJKNJPEF_22 (original name was: gnl|Prokka|HJKNJPEF_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	cyclic-lactone-autoinducer	220,290	240,995

gnlProkkaHJKNJPEF_25 (original name was: gnl|Prokka|HJKNJPEF_25)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	102,424	114,574

Region	Type	From	To	Similarity
Region 3.1	terpene	29,880	50,761
Region 11.1	T3PKS	1	30,911
Region 22.1	cyclic-lactone-autoinducer	220,290	240,995
Region 23.1	RiPP-like	102,424	114,574

No secondary metabolite regions were found in these records:: gnlProkkaHJKNJPEF_1 (original name was: gnl|Prokka|HJKNJPEF_1); gnlProkkaHJKNJPEF_2 (original name was: gnl|Prokka|HJKNJPEF_2); gnlProkkaHJKNJPEF_4 (original name was: gnl|Prokka|HJKNJPEF_4); gnlProkkaHJKNJPEF_5 (original name was: gnl|Prokka|HJKNJPEF_5); gnlProkkaHJKNJPEF_6 (original name was: gnl|Prokka|HJKNJPEF_6); gnlProkkaHJKNJPEF_7 (original name was: gnl|Prokka|HJKNJPEF_7); gnlProkkaHJKNJPEF_8 (original name was: gnl|Prokka|HJKNJPEF_8); gnlProkkaHJKNJPEF_9 (original name was: gnl|Prokka|HJKNJPEF_9); gnlProkkaHJKNJPEF_10 (original name was: gnl|Prokka|HJKNJPEF_10); gnlProkkaHJKNJPEF_12 (original name was: gnl|Prokka|HJKNJPEF_12); gnlProkkaHJKNJPEF_13 (original name was: gnl|Prokka|HJKNJPEF_13); gnlProkkaHJKNJPEF_14 (original name was: gnl|Prokka|HJKNJPEF_14); gnlProkkaHJKNJPEF_15 (original name was: gnl|Prokka|HJKNJPEF_15); gnlProkkaHJKNJPEF_16 (original name was: gnl|Prokka|HJKNJPEF_16); gnlProkkaHJKNJPEF_17 (original name was: gnl|Prokka|HJKNJPEF_17); gnlProkkaHJKNJPEF_18 (original name was: gnl|Prokka|HJKNJPEF_18); gnlProkkaHJKNJPEF_19 (original name was: gnl|Prokka|HJKNJPEF_19); gnlProkkaHJKNJPEF_20 (original name was: gnl|Prokka|HJKNJPEF_20); gnlProkkaHJKNJPEF_21 (original name was: gnl|Prokka|HJKNJPEF_21); gnlProkkaHJKNJPEF_26 (original name was: gnl|Prokka|HJKNJPEF_26); gnlProkkaHJKNJPEF_27 (original name was: gnl|Prokka|HJKNJPEF_27); gnlProkkaHJKNJPEF_28 (original name was: gnl|Prokka|HJKNJPEF_28); gnlProkkaHJKNJPEF_29 (original name was: gnl|Prokka|HJKNJPEF_29); gnlProkkaHJKNJPEF_30 (original name was: gnl|Prokka|HJKNJPEF_30); gnlProkkaHJKNJPEF_31 (original name was: gnl|Prokka|HJKNJPEF_31)

Compact view

gnlProkkaHJKNJPEF_3 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 29,880 - 50,761 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHJKNJPEF_11 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 1 - 30,911 nt. (total: 30,911 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHJKNJPEF_22 - Region 1 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 220,290 - 240,995 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHJKNJPEF_25 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 102,424 - 114,574 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.