GCA_003053035.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCAHEBJCF_1 (original name was: gnl|Prokka|CAHEBJCF_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	76,437	97,318

gnlProkkaCAHEBJCF_3 (original name was: gnl|Prokka|CAHEBJCF_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	1	11,239

gnlProkkaCAHEBJCF_14 (original name was: gnl|Prokka|CAHEBJCF_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	cyclic-lactone-autoinducer	321,645	342,350

gnlProkkaCAHEBJCF_25 (original name was: gnl|Prokka|CAHEBJCF_25)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	296,304	337,473

Region	Type	From	To	Similarity
Region 1.1	terpene	76,437	97,318
Region 3.1	RiPP-like	1	11,239
Region 11.1	cyclic-lactone-autoinducer	321,645	342,350
Region 22.1	T3PKS	296,304	337,473

No secondary metabolite regions were found in these records:: gnlProkkaCAHEBJCF_2 (original name was: gnl|Prokka|CAHEBJCF_2); gnlProkkaCAHEBJCF_4 (original name was: gnl|Prokka|CAHEBJCF_4); gnlProkkaCAHEBJCF_5 (original name was: gnl|Prokka|CAHEBJCF_5); gnlProkkaCAHEBJCF_6 (original name was: gnl|Prokka|CAHEBJCF_6); gnlProkkaCAHEBJCF_8 (original name was: gnl|Prokka|CAHEBJCF_8); gnlProkkaCAHEBJCF_11 (original name was: gnl|Prokka|CAHEBJCF_11); gnlProkkaCAHEBJCF_12 (original name was: gnl|Prokka|CAHEBJCF_12); gnlProkkaCAHEBJCF_13 (original name was: gnl|Prokka|CAHEBJCF_13); gnlProkkaCAHEBJCF_15 (original name was: gnl|Prokka|CAHEBJCF_15); gnlProkkaCAHEBJCF_16 (original name was: gnl|Prokka|CAHEBJCF_16); gnlProkkaCAHEBJCF_17 (original name was: gnl|Prokka|CAHEBJCF_17); gnlProkkaCAHEBJCF_18 (original name was: gnl|Prokka|CAHEBJCF_18); gnlProkkaCAHEBJCF_19 (original name was: gnl|Prokka|CAHEBJCF_19); gnlProkkaCAHEBJCF_20 (original name was: gnl|Prokka|CAHEBJCF_20); gnlProkkaCAHEBJCF_21 (original name was: gnl|Prokka|CAHEBJCF_21); gnlProkkaCAHEBJCF_22 (original name was: gnl|Prokka|CAHEBJCF_22); gnlProkkaCAHEBJCF_23 (original name was: gnl|Prokka|CAHEBJCF_23); gnlProkkaCAHEBJCF_24 (original name was: gnl|Prokka|CAHEBJCF_24); gnlProkkaCAHEBJCF_26 (original name was: gnl|Prokka|CAHEBJCF_26); gnlProkkaCAHEBJCF_27 (original name was: gnl|Prokka|CAHEBJCF_27); gnlProkkaCAHEBJCF_28 (original name was: gnl|Prokka|CAHEBJCF_28); gnlProkkaCAHEBJCF_29 (original name was: gnl|Prokka|CAHEBJCF_29); gnlProkkaCAHEBJCF_30 (original name was: gnl|Prokka|CAHEBJCF_30); gnlProkkaCAHEBJCF_32 (original name was: gnl|Prokka|CAHEBJCF_32); gnlProkkaCAHEBJCF_36 (original name was: gnl|Prokka|CAHEBJCF_36); gnlProkkaCAHEBJCF_38 (original name was: gnl|Prokka|CAHEBJCF_38); gnlProkkaCAHEBJCF_42 (original name was: gnl|Prokka|CAHEBJCF_42); gnlProkkaCAHEBJCF_46 (original name was: gnl|Prokka|CAHEBJCF_46); gnlProkkaCAHEBJCF_49 (original name was: gnl|Prokka|CAHEBJCF_49); gnlProkkaCAHEBJCF_50 (original name was: gnl|Prokka|CAHEBJCF_50)

Compact view

gnlProkkaCAHEBJCF_1 - Region 1 - terpene

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Location: 76,437 - 97,318 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCAHEBJCF_3 - Region 1 - RiPP-like

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Location: 1 - 11,239 nt. (total: 11,239 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCAHEBJCF_14 - Region 1 - cyclic-lactone-autoinducer

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Location: 321,645 - 342,350 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCAHEBJCF_25 - Region 1 - T3PKS

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Location: 296,304 - 337,473 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.