GCA_003053045.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJMNMPKGN_3 (original name was: gnl|Prokka|JMNMPKGN_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	terpene	76,192	97,073

gnlProkkaJMNMPKGN_12 (original name was: gnl|Prokka|JMNMPKGN_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	102,587	114,737
Region 11.2	cyclic-lactone-autoinducer	518,281	538,986

gnlProkkaJMNMPKGN_38 (original name was: gnl|Prokka|JMNMPKGN_38)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	T3PKS	81,615	122,784

Region	Type	From	To	Similarity
Region 2.1	terpene	76,192	97,073
Region 11.1	RiPP-like	102,587	114,737
Region 11.2	cyclic-lactone-autoinducer	518,281	538,986
Region 32.1	T3PKS	81,615	122,784

No secondary metabolite regions were found in these records:: gnlProkkaJMNMPKGN_1 (original name was: gnl|Prokka|JMNMPKGN_1); gnlProkkaJMNMPKGN_4 (original name was: gnl|Prokka|JMNMPKGN_4); gnlProkkaJMNMPKGN_5 (original name was: gnl|Prokka|JMNMPKGN_5); gnlProkkaJMNMPKGN_6 (original name was: gnl|Prokka|JMNMPKGN_6); gnlProkkaJMNMPKGN_7 (original name was: gnl|Prokka|JMNMPKGN_7); gnlProkkaJMNMPKGN_8 (original name was: gnl|Prokka|JMNMPKGN_8); gnlProkkaJMNMPKGN_9 (original name was: gnl|Prokka|JMNMPKGN_9); gnlProkkaJMNMPKGN_10 (original name was: gnl|Prokka|JMNMPKGN_10); gnlProkkaJMNMPKGN_11 (original name was: gnl|Prokka|JMNMPKGN_11); gnlProkkaJMNMPKGN_13 (original name was: gnl|Prokka|JMNMPKGN_13); gnlProkkaJMNMPKGN_14 (original name was: gnl|Prokka|JMNMPKGN_14); gnlProkkaJMNMPKGN_15 (original name was: gnl|Prokka|JMNMPKGN_15); gnlProkkaJMNMPKGN_16 (original name was: gnl|Prokka|JMNMPKGN_16); gnlProkkaJMNMPKGN_17 (original name was: gnl|Prokka|JMNMPKGN_17); gnlProkkaJMNMPKGN_18 (original name was: gnl|Prokka|JMNMPKGN_18); gnlProkkaJMNMPKGN_19 (original name was: gnl|Prokka|JMNMPKGN_19); gnlProkkaJMNMPKGN_20 (original name was: gnl|Prokka|JMNMPKGN_20); gnlProkkaJMNMPKGN_21 (original name was: gnl|Prokka|JMNMPKGN_21); gnlProkkaJMNMPKGN_22 (original name was: gnl|Prokka|JMNMPKGN_22); gnlProkkaJMNMPKGN_23 (original name was: gnl|Prokka|JMNMPKGN_23); gnlProkkaJMNMPKGN_24 (original name was: gnl|Prokka|JMNMPKGN_24); gnlProkkaJMNMPKGN_25 (original name was: gnl|Prokka|JMNMPKGN_25); gnlProkkaJMNMPKGN_26 (original name was: gnl|Prokka|JMNMPKGN_26); gnlProkkaJMNMPKGN_29 (original name was: gnl|Prokka|JMNMPKGN_29); gnlProkkaJMNMPKGN_30 (original name was: gnl|Prokka|JMNMPKGN_30); gnlProkkaJMNMPKGN_31 (original name was: gnl|Prokka|JMNMPKGN_31); gnlProkkaJMNMPKGN_32 (original name was: gnl|Prokka|JMNMPKGN_32); gnlProkkaJMNMPKGN_34 (original name was: gnl|Prokka|JMNMPKGN_34); gnlProkkaJMNMPKGN_35 (original name was: gnl|Prokka|JMNMPKGN_35)

Compact view

gnlProkkaJMNMPKGN_3 - Region 1 - terpene

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Location: 76,192 - 97,073 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJMNMPKGN_12 - Region 1 - RiPP-like

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Location: 102,587 - 114,737 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJMNMPKGN_12 - Region 2 - cyclic-lactone-autoinducer

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Location: 518,281 - 538,986 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJMNMPKGN_38 - Region 1 - T3PKS

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Location: 81,615 - 122,784 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.