GCA_003061645.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNGLFCNJC_2 (original name was: gnl|Prokka|NGLFCNJC_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	1,340	11,525

gnlProkkaNGLFCNJC_5 (original name was: gnl|Prokka|NGLFCNJC_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	1	6,702

gnlProkkaNGLFCNJC_11 (original name was: gnl|Prokka|NGLFCNJC_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	35,369	76,541

Region	Type	From	To	Similarity
Region 2.1	RiPP-like	1,340	11,525
Region 5.1	RiPP-like	1	6,702
Region 11.1	T3PKS	35,369	76,541

No secondary metabolite regions were found in these records:: gnlProkkaNGLFCNJC_1 (original name was: gnl|Prokka|NGLFCNJC_1); gnlProkkaNGLFCNJC_3 (original name was: gnl|Prokka|NGLFCNJC_3); gnlProkkaNGLFCNJC_4 (original name was: gnl|Prokka|NGLFCNJC_4); gnlProkkaNGLFCNJC_6 (original name was: gnl|Prokka|NGLFCNJC_6); gnlProkkaNGLFCNJC_7 (original name was: gnl|Prokka|NGLFCNJC_7); gnlProkkaNGLFCNJC_8 (original name was: gnl|Prokka|NGLFCNJC_8); gnlProkkaNGLFCNJC_9 (original name was: gnl|Prokka|NGLFCNJC_9); gnlProkkaNGLFCNJC_10 (original name was: gnl|Prokka|NGLFCNJC_10); gnlProkkaNGLFCNJC_12 (original name was: gnl|Prokka|NGLFCNJC_12); gnlProkkaNGLFCNJC_13 (original name was: gnl|Prokka|NGLFCNJC_13); gnlProkkaNGLFCNJC_14 (original name was: gnl|Prokka|NGLFCNJC_14); gnlProkkaNGLFCNJC_15 (original name was: gnl|Prokka|NGLFCNJC_15); gnlProkkaNGLFCNJC_16 (original name was: gnl|Prokka|NGLFCNJC_16); gnlProkkaNGLFCNJC_17 (original name was: gnl|Prokka|NGLFCNJC_17); gnlProkkaNGLFCNJC_18 (original name was: gnl|Prokka|NGLFCNJC_18); gnlProkkaNGLFCNJC_19 (original name was: gnl|Prokka|NGLFCNJC_19); gnlProkkaNGLFCNJC_20 (original name was: gnl|Prokka|NGLFCNJC_20); gnlProkkaNGLFCNJC_21 (original name was: gnl|Prokka|NGLFCNJC_21); gnlProkkaNGLFCNJC_22 (original name was: gnl|Prokka|NGLFCNJC_22); gnlProkkaNGLFCNJC_23 (original name was: gnl|Prokka|NGLFCNJC_23); gnlProkkaNGLFCNJC_24 (original name was: gnl|Prokka|NGLFCNJC_24); gnlProkkaNGLFCNJC_25 (original name was: gnl|Prokka|NGLFCNJC_25); gnlProkkaNGLFCNJC_26 (original name was: gnl|Prokka|NGLFCNJC_26); gnlProkkaNGLFCNJC_27 (original name was: gnl|Prokka|NGLFCNJC_27); gnlProkkaNGLFCNJC_30 (original name was: gnl|Prokka|NGLFCNJC_30); gnlProkkaNGLFCNJC_33 (original name was: gnl|Prokka|NGLFCNJC_33); gnlProkkaNGLFCNJC_35 (original name was: gnl|Prokka|NGLFCNJC_35); gnlProkkaNGLFCNJC_43 (original name was: gnl|Prokka|NGLFCNJC_43); gnlProkkaNGLFCNJC_54 (original name was: gnl|Prokka|NGLFCNJC_54); gnlProkkaNGLFCNJC_56 (original name was: gnl|Prokka|NGLFCNJC_56); gnlProkkaNGLFCNJC_57 (original name was: gnl|Prokka|NGLFCNJC_57)

Compact view

gnlProkkaNGLFCNJC_2 - Region 1 - RiPP-like

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Location: 1,340 - 11,525 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGLFCNJC_5 - Region 1 - RiPP-like

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Location: 1 - 6,702 nt. (total: 6,702 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGLFCNJC_11 - Region 1 - T3PKS

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Location: 35,369 - 76,541 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.