GCA_003061705.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNIPKADMG_3 (original name was: gnl|Prokka|NIPKADMG_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	1,340	11,525

gnlProkkaNIPKADMG_6 (original name was: gnl|Prokka|NIPKADMG_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	RiPP-like	1	6,702

gnlProkkaNIPKADMG_22 (original name was: gnl|Prokka|NIPKADMG_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	272,811	313,983

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	1,340	11,525
Region 6.1	RiPP-like	1	6,702
Region 22.1	T3PKS	272,811	313,983

No secondary metabolite regions were found in these records:: gnlProkkaNIPKADMG_1 (original name was: gnl|Prokka|NIPKADMG_1); gnlProkkaNIPKADMG_2 (original name was: gnl|Prokka|NIPKADMG_2); gnlProkkaNIPKADMG_4 (original name was: gnl|Prokka|NIPKADMG_4); gnlProkkaNIPKADMG_5 (original name was: gnl|Prokka|NIPKADMG_5); gnlProkkaNIPKADMG_7 (original name was: gnl|Prokka|NIPKADMG_7); gnlProkkaNIPKADMG_8 (original name was: gnl|Prokka|NIPKADMG_8); gnlProkkaNIPKADMG_9 (original name was: gnl|Prokka|NIPKADMG_9); gnlProkkaNIPKADMG_10 (original name was: gnl|Prokka|NIPKADMG_10); gnlProkkaNIPKADMG_11 (original name was: gnl|Prokka|NIPKADMG_11); gnlProkkaNIPKADMG_12 (original name was: gnl|Prokka|NIPKADMG_12); gnlProkkaNIPKADMG_13 (original name was: gnl|Prokka|NIPKADMG_13); gnlProkkaNIPKADMG_14 (original name was: gnl|Prokka|NIPKADMG_14); gnlProkkaNIPKADMG_15 (original name was: gnl|Prokka|NIPKADMG_15); gnlProkkaNIPKADMG_16 (original name was: gnl|Prokka|NIPKADMG_16); gnlProkkaNIPKADMG_17 (original name was: gnl|Prokka|NIPKADMG_17); gnlProkkaNIPKADMG_18 (original name was: gnl|Prokka|NIPKADMG_18); gnlProkkaNIPKADMG_19 (original name was: gnl|Prokka|NIPKADMG_19); gnlProkkaNIPKADMG_20 (original name was: gnl|Prokka|NIPKADMG_20); gnlProkkaNIPKADMG_21 (original name was: gnl|Prokka|NIPKADMG_21); gnlProkkaNIPKADMG_23 (original name was: gnl|Prokka|NIPKADMG_23); gnlProkkaNIPKADMG_24 (original name was: gnl|Prokka|NIPKADMG_24); gnlProkkaNIPKADMG_25 (original name was: gnl|Prokka|NIPKADMG_25); gnlProkkaNIPKADMG_30 (original name was: gnl|Prokka|NIPKADMG_30); gnlProkkaNIPKADMG_31 (original name was: gnl|Prokka|NIPKADMG_31); gnlProkkaNIPKADMG_33 (original name was: gnl|Prokka|NIPKADMG_33); gnlProkkaNIPKADMG_35 (original name was: gnl|Prokka|NIPKADMG_35); gnlProkkaNIPKADMG_40 (original name was: gnl|Prokka|NIPKADMG_40); gnlProkkaNIPKADMG_47 (original name was: gnl|Prokka|NIPKADMG_47); gnlProkkaNIPKADMG_48 (original name was: gnl|Prokka|NIPKADMG_48)

Compact view

gnlProkkaNIPKADMG_3 - Region 1 - RiPP-like

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Location: 1,340 - 11,525 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNIPKADMG_6 - Region 1 - RiPP-like

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Location: 1 - 6,702 nt. (total: 6,702 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNIPKADMG_22 - Region 1 - T3PKS

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Location: 272,811 - 313,983 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.