GCA_003324115.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIKPFODNH_12 (original name was: gnl|Prokka|IKPFODNH_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	cyclic-lactone-autoinducer	77,512	99,244

gnlProkkaIKPFODNH_51 (original name was: gnl|Prokka|IKPFODNH_51)

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	ranthipeptide	68,016	89,681

gnlProkkaIKPFODNH_56 (original name was: gnl|Prokka|IKPFODNH_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 48.1	lassopeptide	1	1,661

Region	Type	From	To	Similarity
Region 4.1	cyclic-lactone-autoinducer	77,512	99,244
Region 43.1	ranthipeptide	68,016	89,681
Region 48.1	lassopeptide	1	1,661

No secondary metabolite regions were found in these records:: gnlProkkaIKPFODNH_5 (original name was: gnl|Prokka|IKPFODNH_5); gnlProkkaIKPFODNH_8 (original name was: gnl|Prokka|IKPFODNH_8); gnlProkkaIKPFODNH_10 (original name was: gnl|Prokka|IKPFODNH_10); gnlProkkaIKPFODNH_13 (original name was: gnl|Prokka|IKPFODNH_13); gnlProkkaIKPFODNH_14 (original name was: gnl|Prokka|IKPFODNH_14); gnlProkkaIKPFODNH_15 (original name was: gnl|Prokka|IKPFODNH_15); gnlProkkaIKPFODNH_16 (original name was: gnl|Prokka|IKPFODNH_16); gnlProkkaIKPFODNH_17 (original name was: gnl|Prokka|IKPFODNH_17); gnlProkkaIKPFODNH_18 (original name was: gnl|Prokka|IKPFODNH_18); gnlProkkaIKPFODNH_19 (original name was: gnl|Prokka|IKPFODNH_19); gnlProkkaIKPFODNH_20 (original name was: gnl|Prokka|IKPFODNH_20); gnlProkkaIKPFODNH_21 (original name was: gnl|Prokka|IKPFODNH_21); gnlProkkaIKPFODNH_22 (original name was: gnl|Prokka|IKPFODNH_22); gnlProkkaIKPFODNH_23 (original name was: gnl|Prokka|IKPFODNH_23); gnlProkkaIKPFODNH_24 (original name was: gnl|Prokka|IKPFODNH_24); gnlProkkaIKPFODNH_25 (original name was: gnl|Prokka|IKPFODNH_25); gnlProkkaIKPFODNH_26 (original name was: gnl|Prokka|IKPFODNH_26); gnlProkkaIKPFODNH_27 (original name was: gnl|Prokka|IKPFODNH_27); gnlProkkaIKPFODNH_28 (original name was: gnl|Prokka|IKPFODNH_28); gnlProkkaIKPFODNH_29 (original name was: gnl|Prokka|IKPFODNH_29); gnlProkkaIKPFODNH_30 (original name was: gnl|Prokka|IKPFODNH_30); gnlProkkaIKPFODNH_31 (original name was: gnl|Prokka|IKPFODNH_31); gnlProkkaIKPFODNH_32 (original name was: gnl|Prokka|IKPFODNH_32); gnlProkkaIKPFODNH_33 (original name was: gnl|Prokka|IKPFODNH_33); gnlProkkaIKPFODNH_34 (original name was: gnl|Prokka|IKPFODNH_34); gnlProkkaIKPFODNH_35 (original name was: gnl|Prokka|IKPFODNH_35); gnlProkkaIKPFODNH_36 (original name was: gnl|Prokka|IKPFODNH_36); gnlProkkaIKPFODNH_37 (original name was: gnl|Prokka|IKPFODNH_37); gnlProkkaIKPFODNH_38 (original name was: gnl|Prokka|IKPFODNH_38); gnlProkkaIKPFODNH_39 (original name was: gnl|Prokka|IKPFODNH_39); gnlProkkaIKPFODNH_40 (original name was: gnl|Prokka|IKPFODNH_40); gnlProkkaIKPFODNH_41 (original name was: gnl|Prokka|IKPFODNH_41); gnlProkkaIKPFODNH_42 (original name was: gnl|Prokka|IKPFODNH_42); gnlProkkaIKPFODNH_43 (original name was: gnl|Prokka|IKPFODNH_43); gnlProkkaIKPFODNH_44 (original name was: gnl|Prokka|IKPFODNH_44); gnlProkkaIKPFODNH_45 (original name was: gnl|Prokka|IKPFODNH_45); gnlProkkaIKPFODNH_46 (original name was: gnl|Prokka|IKPFODNH_46); gnlProkkaIKPFODNH_47 (original name was: gnl|Prokka|IKPFODNH_47); gnlProkkaIKPFODNH_48 (original name was: gnl|Prokka|IKPFODNH_48); gnlProkkaIKPFODNH_49 (original name was: gnl|Prokka|IKPFODNH_49); gnlProkkaIKPFODNH_50 (original name was: gnl|Prokka|IKPFODNH_50); gnlProkkaIKPFODNH_52 (original name was: gnl|Prokka|IKPFODNH_52); gnlProkkaIKPFODNH_53 (original name was: gnl|Prokka|IKPFODNH_53); gnlProkkaIKPFODNH_54 (original name was: gnl|Prokka|IKPFODNH_54); gnlProkkaIKPFODNH_55 (original name was: gnl|Prokka|IKPFODNH_55); gnlProkkaIKPFODNH_57 (original name was: gnl|Prokka|IKPFODNH_57); gnlProkkaIKPFODNH_58 (original name was: gnl|Prokka|IKPFODNH_58); gnlProkkaIKPFODNH_59 (original name was: gnl|Prokka|IKPFODNH_59); gnlProkkaIKPFODNH_60 (original name was: gnl|Prokka|IKPFODNH_60); gnlProkkaIKPFODNH_61 (original name was: gnl|Prokka|IKPFODNH_61); gnlProkkaIKPFODNH_62 (original name was: gnl|Prokka|IKPFODNH_62); gnlProkkaIKPFODNH_63 (original name was: gnl|Prokka|IKPFODNH_63); gnlProkkaIKPFODNH_64 (original name was: gnl|Prokka|IKPFODNH_64); gnlProkkaIKPFODNH_65 (original name was: gnl|Prokka|IKPFODNH_65); gnlProkkaIKPFODNH_66 (original name was: gnl|Prokka|IKPFODNH_66); gnlProkkaIKPFODNH_67 (original name was: gnl|Prokka|IKPFODNH_67); gnlProkkaIKPFODNH_68 (original name was: gnl|Prokka|IKPFODNH_68); gnlProkkaIKPFODNH_70 (original name was: gnl|Prokka|IKPFODNH_70); gnlProkkaIKPFODNH_76 (original name was: gnl|Prokka|IKPFODNH_76); gnlProkkaIKPFODNH_79 (original name was: gnl|Prokka|IKPFODNH_79); gnlProkkaIKPFODNH_83 (original name was: gnl|Prokka|IKPFODNH_83)

Compact view

gnlProkkaIKPFODNH_12 - Region 1 - cyclic-lactone-autoinducer

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Location: 77,512 - 99,244 nt. (total: 21,733 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIKPFODNH_51 - Region 1 - ranthipeptide

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Location: 68,016 - 89,681 nt. (total: 21,666 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIKPFODNH_56 - Region 1 - lassopeptide

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Location: 1 - 1,661 nt. (total: 1,661 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.