GCA_003346075.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAJJJDFNN_105 (original name was: gnl|Prokka|AJJJDFNN_105)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	cyclic-lactone-autoinducer	1	16,007

gnlProkkaAJJJDFNN_122 (original name was: gnl|Prokka|AJJJDFNN_122)

Region	Type	From	To	Most similar known cluster		Similarity
Region 63.1	T3PKS	1	29,131

gnlProkkaAJJJDFNN_133 (original name was: gnl|Prokka|AJJJDFNN_133)

Region	Type	From	To	Most similar known cluster		Similarity
Region 74.1	terpene	66,498	87,379

Region	Type	From	To	Similarity
Region 46.1	cyclic-lactone-autoinducer	1	16,007
Region 63.1	T3PKS	1	29,131
Region 74.1	terpene	66,498	87,379

Compact view

gnlProkkaAJJJDFNN_105 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 16,007 nt. (total: 16,007 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAJJJDFNN_122 - Region 1 - T3PKS

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Location: 1 - 29,131 nt. (total: 29,131 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAJJJDFNN_133 - Region 1 - terpene

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Location: 66,498 - 87,379 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.