Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_003370295.1	Bifidobacterium breve	91-1	SAMN07189838	2012	Canada: Toronto	Homo sapiens	0	0	0	0	0.00
2	GCA_027215075.1	Bifidobacterium breve	SDS-1440-OWr	SAMN32244236	2019-07-05	Canada: Vancouver	Homo sapiens	1118	3	0	0	3.00
3	GCA_027215185.1	Bifidobacterium breve	SDS-1439-RL	SAMN32244255	2019-06-21	Canada: Vancouver	Homo sapiens	1118	3	0	0	3.00
4	GCA_027215315.1	Bifidobacterium breve	SDS-1441-OWr	SAMN32244253	2019-09-20	Canada: Vancouver	Homo sapiens	1118	3	0	0	3.00
5	GCA_030216725.1	Bifidobacterium breve	UMB6681	SAMN34996552	2015-01	USA: Maywood, IL	Homo sapiens	1123	2	0	0	2.00
6	GCA_027214675.1	Bifidobacterium breve	SDS-834-OWp	SAMN32244262	2019-02-27	Canada: Vancouver	Homo sapiens	1128	2	0	0	2.00
7	GCA_027214825.1	Bifidobacterium breve	SDS-835-OWp	SAMN32244234	2019-04-06	Canada: Vancouver	Homo sapiens	1128	2	0	0	2.00
8	GCA_027215005.1	Bifidobacterium breve	SDS-832-OWp	SAMN32244252	2019-02-20	Canada: Vancouver	Homo sapiens	1128	2	0	0	2.00
9	GCA_027215095.1	Bifidobacterium breve	SDS-744-OW	SAMN32244245	2019-10-15	Canada: Vancouver	Homo sapiens	1133	1	0	0	1.00
10	GCA_027212595.1	Bifidobacterium breve	SDS-744-W	SAMN32244246	2019-10-15	Canada: Vancouver	Homo sapiens	1135	1	0	0	1.00
11	GCA_028201995.1	Bifidobacterium breve	1001287st1_G6_1001287H_170206	SAMN31321422	2017-02-06	USA	Homo sapiens	1136	4	0	0	4.00
12	GCA_030414125.1	Bifidobacterium breve	Bif11	SAMN08966057	2015	India:Chandigarh	Homo sapiens	1137	3	0	0	3.00
13	GCA_027214485.1	Bifidobacterium breve	SDS-746-OW	SAMN32244264	2019-10-28	Canada: Vancouver	Homo sapiens	1138	3	0	0	3.00
14	GCA_027214565.1	Bifidobacterium breve	SDS-746-W	SAMN32244265	2019-10-28	Canada: Vancouver	Homo sapiens	1138	3	0	0	3.00
15	GCA_027215265.1	Bifidobacterium breve	SDS-1702-OWr1	SAMN32244257	2019-09-24	Canada: Vancouver	Homo sapiens	1142	2	0	0	2.00
16	GCA_027215305.1	Bifidobacterium breve	SDS-1703-OWr1	SAMN32244240	2019-12-11	Canada: Vancouver	Homo sapiens	1142	2	0	0	2.00
17	GCA_027215525.1	Bifidobacterium breve	SDS-1701-OWr1	SAMN32244244	2019-09-13	Canada: Vancouver	Homo sapiens	1142	2	0	0	2.00
18	GCA_014779815.1	Bifidobacterium breve	142	SAMN12139126	2013	India	Homo sapiens	1144	2	0	0	2.00
19	GCA_003370105.1	Bifidobacterium breve	N6D12	SAMN07189843	2007	Kenya: Nairobi	Homo sapiens	1146	1	0	0	1.00
20	GCA_002838445.1	Bifidobacterium breve	DRBB27	SAMN06827975	2014-10-01	Netherlands	Homo sapiens	1150	1	0	0	1.00
21	GCA_002838705.1	Bifidobacterium breve	DRBB29	SAMN07160978	2014-10-01	Netherlands	Homo sapiens	1150	1	0	0	1.00
22	GCA_002871815.1	Bifidobacterium breve	UMB0089	SAMN07511392	2015	USA: Maywood, IL	Homo sapiens	1152	3	0	0	3.00
23	GCA_002861455.1	Bifidobacterium breve	UMB0915	SAMN08193648	2015	USA: Maywood, IL	Homo sapiens	1153	3	0	0	3.00
24	GCA_902167895.1	Bifidobacterium breve	-	SAMEA5771494	-	-	-	1156	2	0	0	2.00
25	GCA_040151035.1	Bifidobacterium breve	LH-CAM-38	SAMN40597875	2021	Cameroon	Homo sapiens	1168	1	0	0	1.00
26	GCA_030441965.1	Bifidobacterium breve	DSM 32583	SAMN34073939	-	Spain	Homo sapiens	1170	2	0	0	2.00
27	GCA_029723395.1	Bifidobacterium breve	LH_1047	SAMN24838609	2017	United Kingdom	Homo sapiens	1179	6	0	0	6.00
28	GCA_029723755.1	Bifidobacterium breve	LH_1004	SAMN24838601	2017	United Kingdom	Homo sapiens	1179	6	0	0	6.00
29	GCA_002838325.1	Bifidobacterium breve	NRBB09	SAMN06827067	2014-10-01	Netherlands	Homo sapiens	1182	1	0	0	1.00
30	GCA_040150815.1	Bifidobacterium breve	LH-CAM-63	SAMN40597883	2021	Cameroon	Homo sapiens	1189	1	0	0	1.00
31	GCA_000568895.1	Bifidobacterium breve 2L	2L	SAMN02951890	-	Italy: Parma	Homo sapiens	1193	2	0	0	2.00
32	GCA_000568955.2	Bifidobacterium breve 12L	12L	SAMN03081478	-	-	-	1193	2	0	0	2.00
33	GCA_003370195.1	Bifidobacterium breve	30-1	SAMN07189837	2012	Canada: Toronto	Homo sapiens	1196	1	0	0	1.00
34	GCA_040150935.1	Bifidobacterium breve	LH-CAM-52	SAMN40597879	2021	Cameroon	Homo sapiens	1197	2	0	0	2.00
35	GCA_001263915.1	Bifidobacterium breve MCC 1128	MCC 1128	SAMN03978799	-	Japan	Homo sapiens	1199	1	0	0	1.00
36	GCA_003813065.1	Bifidobacterium breve	FDAARGOS_561	SAMN10163185	1963	-	Homo sapiens	1200	1	0	0	1.00
37	GCA_033567675.1	Bifidobacterium breve	BS2-PB3	SAMN38080309	2022-01-01	Indonesia	Homo sapiens	1200	1	0	0	1.00
38	GCA_040834035.1	Bifidobacterium breve	BS2-PS2	SAMN42044626	2022-02-15	Indonesia: Tangerang	Homo sapiens	1200	1	0	0	1.00
39	GCA_000158015.1	Bifidobacterium breve DSM 20213 = JCM 1192	DSM 20213	SAMN00008778	-	-	Homo sapiens	1201	2	0	0	2.00
40	GCA_001025175.1	Bifidobacterium breve DSM 20213 = JCM 1192	-	SAMD00061041	-	-	-	1201	1	0	0	1.00
41	GCA_002838245.1	Bifidobacterium breve	NRBB01	SAMN06827008	2014-10-01	Netherlands	Homo sapiens	1201	1	0	0	1.00
42	GCA_002838305.1	Bifidobacterium breve	NRBB11	SAMN06827081	2014-10-01	Netherlands	Homo sapiens	1201	1	0	0	1.00
43	GCA_003095095.1	Bifidobacterium breve	DS15_17	SAMN06464121	2016-09-14	USA:MD	Homo sapiens	1201	1	0	0	1.00
44	GCA_008868405.1	Bifidobacterium breve	BIO6018	SAMN12856546	-	-	Homo sapiens	1201	1	0	0	1.00
45	GCA_030876985.1	Bifidobacterium breve	B6	SAMN34082179	-	-	Homo sapiens	1201	1	0	0	1.00
46	GCA_040834025.1	Bifidobacterium breve	BS2-PS1	SAMN42044505	2022-02-02	Indonesia: Tangerang	Homo sapiens	1201	1	0	0	1.00
47	GCA_900637145.1	Bifidobacterium breve	NCTC11815	SAMEA4076721	1900/1985	-	Human (Infant)	1201	1	0	0	1.00
48	GCA_000741125.1	Bifidobacterium breve	LMG 13208	SAMN02673429	-	-	Homo sapiens	1202	1	0	0	1.00
49	GCA_001189355.1	Bifidobacterium breve	BBRI4	SAMN03777307	2013-11-26	Italy: Trento	Homo sapiens	1203	3	0	0	3.00
50	GCA_003370155.1	Bifidobacterium breve	12-4	SAMN07189840	2005	Canada	Homo sapiens	1203	1	0	0	1.00
51	GCA_002838345.1	Bifidobacterium breve	NRBB57	SAMN06827912	2014-10-01	Netherlands	Homo sapiens	1204	2	0	0	2.00
52	GCA_002838485.1	Bifidobacterium breve	215W447a	SAMN06829004	2014-10-01	Ireland	Homo sapiens	1204	1	0	0	1.00
53	GCA_902651995.1	Bifidobacterium breve	-	SAMEA6160251	-	-	-	1204	2	0	0	2.00
54	GCA_001281425.1	Bifidobacterium breve	BR3	SAMN03271681	2001-08-13	Korea	Homo sapiens	1205	3	0	0	3.00
55	GCA_002076055.1	Bifidobacterium breve	1891B	SAMN06621711	-	Italy	Homo sapiens	1205	4	0	0	4.00
56	GCA_002838545.1	Bifidobacterium breve	082W48	SAMN06828932	2014-10-01	Ireland	Homo sapiens	1205	1	0	0	1.00
57	GCA_002838585.1	Bifidobacterium breve	CNCM I-4321	SAMN06827913	2014-10-01	Netherlands	Homo sapiens	1205	4	0	0	4.00
58	GCA_002838725.1	Bifidobacterium breve	DRBB30	SAMN07160979	2014-10-01	Netherlands	Homo sapiens	1205	4	0	0	4.00
59	GCA_016648955.1	Bifidobacterium breve	PRL2020	SAMN16287677	2018	Italy	Homo sapiens	1205	4	0	0	4.00
60	GCA_016648985.1	Bifidobacterium breve	M1D	SAMN16287678	2019	Italy	Homo sapiens	1205	4	0	0	4.00
61	GCA_049205255.1	Bifidobacterium breve	IATA084	SAMN45053963	2022	Spain:Valencia	Homo sapiens	1205	1	0	0	1.00
62	GCA_902167575.1	Bifidobacterium breve	-	SAMEA5770182	-	-	-	1205	3	0	0	3.00
63	GCA_000220135.1	Bifidobacterium breve UCC2003	UCC2003	SAMN02604112	-	-	-	1206	1	0	0	1.00
64	GCA_000569035.1	Bifidobacterium breve NCFB 2258	NCFB 2258	SAMN03081481	-	-	-	1206	1	0	0	1.00
65	GCA_002838285.1	Bifidobacterium breve	NRBB04	SAMN06827050	2014-10-01	Netherlands	Homo sapiens	1206	1	0	0	1.00
66	GCA_002838425.1	Bifidobacterium breve	NRBB56	SAMN06827911	2014-10-01	Netherlands	Homo sapiens	1206	1	0	0	1.00
67	GCA_003370175.1	Bifidobacterium breve	322-1	SAMN07189839	2012	Canada: Toronto	Homo sapiens	1206	2	0	0	2.00
68	GCA_009429085.1	Bifidobacterium breve	IDCC4401	SAMN13091495	2019-10	South Korea: Hwaseong	Homo sapiens	1206	1	0	0	1.00
69	GCA_024665435.1	Bifidobacterium breve	BIF195	SAMN29862206	-	-	Homo sapiens	1206	1	0	0	1.00
70	GCA_024760465.1	Bifidobacterium breve	1101A	SAMN14967674	2012	Brazil: Belo Horizonte	Homo sapiens	1206	2	0	0	2.00
71	GCA_028201765.1	Bifidobacterium breve	1001274st1_G4_1001274B_151102	SAMN31321419	2015-11-02	USA	Homo sapiens	1206	2	0	0	2.00
72	GCA_028201775.1	Bifidobacterium breve	J1101312st1_E4_J1101312_190322	SAMN31321433	2019-03-22	USA	Homo sapiens	1206	1	0	0	1.00
73	GCA_028203415.1	Bifidobacterium breve	J1101312st1_H6_J1101312_190322	SAMN31321434	2019-03-22	USA	Homo sapiens	1206	1	0	0	1.00
74	GCA_902505445.1	Bifidobacterium breve	-	SAMEA4838173	2014-08-08	United Kingdom	-	1206	1	0	0	1.00
75	GCA_902505485.1	Bifidobacterium breve	-	SAMEA4838172	2014-08-08	United Kingdom	-	1206	1	0	0	1.00
76	GCA_000213865.1	Bifidobacterium breve ACS-071-V-Sch8b	ACS-071-V-Sch8b	SAMN00100758	-	-	Homo sapiens	1207	2	0	0	2.00
77	GCA_028203455.1	Bifidobacterium breve	1001254st1_D4_1001254J_160919	SAMN31321418	2016-09-19	USA	Homo sapiens	1207	3	0	0	3.00
78	GCA_028203465.1	Bifidobacterium breve	1001254st1_B10_1001254J_160919	SAMN31321417	2016-09-19	USA	Homo sapiens	1207	3	0	0	3.00
79	GCA_000569075.1	Bifidobacterium breve S27	S27	SAMN03081483	-	-	-	1208	1	0	0	1.00
80	GCA_002838385.1	Bifidobacterium breve	NRBB52	SAMN06827097	2014-10-01	Netherlands	Homo sapiens	1208	1	0	0	1.00
81	GCA_002914865.1	Bifidobacterium breve	BB02	SAMN07187787	2017	Italy	-	1208	2	0	0	2.00
82	GCA_003370265.1	Bifidobacterium breve	W56	SAMN07189842	2005	Canada: Winnipeg	Homo sapiens	1208	1	0	0	1.00
83	GCA_028201915.1	Bifidobacterium breve	1001274st1_H8_1001274B_151102	SAMN31321420	2015-11-02	USA	Homo sapiens	1208	2	0	0	2.00
84	GCA_030219005.1	Bifidobacterium breve	UMB0002	SAMN34996433	-	USA: Maywood, IL	Homo sapiens	1208	2	1	1	2.45
85	GCA_000569055.1	Bifidobacterium breve 689b	689b	SAMN03081482	-	-	-	1209	1	0	0	1.00
86	GCA_001263935.1	Bifidobacterium breve MCC 1605	MCC 1605	SAMN03978805	-	Japan	Homo sapiens	1209	2	0	0	2.00
87	GCA_002076075.1	Bifidobacterium breve	1889B	SAMN06621709	-	Italy	Homo sapiens	1209	1	0	0	1.00
88	GCA_003370125.1	Bifidobacterium breve	W20-13	SAMN07189841	2005	Canada: Winnipeg	Homo sapiens	1209	1	0	0	1.00
89	GCA_028201785.1	Bifidobacterium breve	BSD2780061687st1_F3_BSD3448080968_160620	SAMN31321427	2016-06-20	USA	Homo sapiens	1209	2	0	0	2.00
90	GCA_028201855.1	Bifidobacterium breve	BSD2780061687st1_C6_BSD3448080968_160620	SAMN31321426	2016-06-20	USA	Homo sapiens	1209	2	0	0	2.00
91	GCA_000247755.2	Bifidobacterium breve CECT 7263	CECT 7263	SAMN02471362	2007-09	Spain	Homo sapiens	1210	4	0	0	4.00
92	GCA_001263855.1	Bifidobacterium breve MCC 1114	MCC 1114	SAMN03978798	-	Japan	Homo sapiens	1210	1	0	0	1.00
93	GCA_001990225.1	Bifidobacterium breve	LMC520	SAMN06240351	1900-01-01	-	-	1210	2	0	0	2.00
94	GCA_002027265.1	Bifidobacterium breve	CECT7263	SAMN06473336	-	Spain	Homo sapiens	1210	4	0	0	4.00
95	GCA_002838505.1	Bifidobacterium breve	DRBB28	SAMN06827976	2014-10-01	Netherlands	Homo sapiens	1210	3	0	0	3.00
96	GCA_028203585.1	Bifidobacterium breve	2217st1_B10_2217SCRN_200827	SAMN31321423	2020-08-27	USA	Homo sapiens	1210	1	0	0	1.00
97	GCA_036872545.1	Bifidobacterium breve	TCI761	SAMN39949153	2020-05-14	Taiwan	Homo sapiens	1210	2	0	0	2.00
98	GCA_039912975.1	Bifidobacterium breve	2217st1_C9_2217SCRN_200827	SAMN31321424	2020-08-27	USA	Homo sapiens	1210	1	0	0	1.00
99	GCA_049204755.1	Bifidobacterium breve	IATA153	SAMN45053990	2022	Spain:Valencia	Homo sapiens	1210	5	0	0	5.00
100	GCA_000568875.1	Bifidobacterium breve 31L	31L	SAMN02951889	-	Italy: Parma	Homo sapiens	1211	3	0	0	3.00