GCA_003457695.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFNBGPOIG_11 (original name was: gnl|Prokka|FNBGPOIG_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	LAP	7,034	34,477

gnlProkkaFNBGPOIG_23 (original name was: gnl|Prokka|FNBGPOIG_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	102,341	114,437	quinolidomicin A	Polyketide	3%

gnlProkkaFNBGPOIG_34 (original name was: gnl|Prokka|FNBGPOIG_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RiPP-like	71,982	82,278

gnlProkkaFNBGPOIG_45 (original name was: gnl|Prokka|FNBGPOIG_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	T3PKS	63,704	104,870

gnlProkkaFNBGPOIG_56 (original name was: gnl|Prokka|FNBGPOIG_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	RiPP-like	1,995	20,837

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	LAP	7,034	34,477
Region 23.1	RiPP-like	102,341	114,437	quinolidomicin A	Polyketide	3%
Region 34.1	RiPP-like	71,982	82,278
Region 39.1	T3PKS	63,704	104,870
Region 43.1	RiPP-like	1,995	20,837

No secondary metabolite regions were found in these records:: gnlProkkaFNBGPOIG_1 (original name was: gnl|Prokka|FNBGPOIG_1); gnlProkkaFNBGPOIG_2 (original name was: gnl|Prokka|FNBGPOIG_2); gnlProkkaFNBGPOIG_3 (original name was: gnl|Prokka|FNBGPOIG_3); gnlProkkaFNBGPOIG_4 (original name was: gnl|Prokka|FNBGPOIG_4); gnlProkkaFNBGPOIG_5 (original name was: gnl|Prokka|FNBGPOIG_5); gnlProkkaFNBGPOIG_6 (original name was: gnl|Prokka|FNBGPOIG_6); gnlProkkaFNBGPOIG_7 (original name was: gnl|Prokka|FNBGPOIG_7); gnlProkkaFNBGPOIG_8 (original name was: gnl|Prokka|FNBGPOIG_8); gnlProkkaFNBGPOIG_9 (original name was: gnl|Prokka|FNBGPOIG_9); gnlProkkaFNBGPOIG_10 (original name was: gnl|Prokka|FNBGPOIG_10); gnlProkkaFNBGPOIG_12 (original name was: gnl|Prokka|FNBGPOIG_12); gnlProkkaFNBGPOIG_13 (original name was: gnl|Prokka|FNBGPOIG_13); gnlProkkaFNBGPOIG_14 (original name was: gnl|Prokka|FNBGPOIG_14); gnlProkkaFNBGPOIG_15 (original name was: gnl|Prokka|FNBGPOIG_15); gnlProkkaFNBGPOIG_16 (original name was: gnl|Prokka|FNBGPOIG_16); gnlProkkaFNBGPOIG_17 (original name was: gnl|Prokka|FNBGPOIG_17); gnlProkkaFNBGPOIG_18 (original name was: gnl|Prokka|FNBGPOIG_18); gnlProkkaFNBGPOIG_19 (original name was: gnl|Prokka|FNBGPOIG_19); gnlProkkaFNBGPOIG_20 (original name was: gnl|Prokka|FNBGPOIG_20); gnlProkkaFNBGPOIG_21 (original name was: gnl|Prokka|FNBGPOIG_21); gnlProkkaFNBGPOIG_22 (original name was: gnl|Prokka|FNBGPOIG_22); gnlProkkaFNBGPOIG_24 (original name was: gnl|Prokka|FNBGPOIG_24); gnlProkkaFNBGPOIG_25 (original name was: gnl|Prokka|FNBGPOIG_25); gnlProkkaFNBGPOIG_26 (original name was: gnl|Prokka|FNBGPOIG_26); gnlProkkaFNBGPOIG_27 (original name was: gnl|Prokka|FNBGPOIG_27); gnlProkkaFNBGPOIG_28 (original name was: gnl|Prokka|FNBGPOIG_28); gnlProkkaFNBGPOIG_29 (original name was: gnl|Prokka|FNBGPOIG_29); gnlProkkaFNBGPOIG_30 (original name was: gnl|Prokka|FNBGPOIG_30); gnlProkkaFNBGPOIG_31 (original name was: gnl|Prokka|FNBGPOIG_31); gnlProkkaFNBGPOIG_32 (original name was: gnl|Prokka|FNBGPOIG_32); gnlProkkaFNBGPOIG_33 (original name was: gnl|Prokka|FNBGPOIG_33); gnlProkkaFNBGPOIG_35 (original name was: gnl|Prokka|FNBGPOIG_35); gnlProkkaFNBGPOIG_36 (original name was: gnl|Prokka|FNBGPOIG_36); gnlProkkaFNBGPOIG_37 (original name was: gnl|Prokka|FNBGPOIG_37); gnlProkkaFNBGPOIG_38 (original name was: gnl|Prokka|FNBGPOIG_38); gnlProkkaFNBGPOIG_53 (original name was: gnl|Prokka|FNBGPOIG_53); gnlProkkaFNBGPOIG_54 (original name was: gnl|Prokka|FNBGPOIG_54); gnlProkkaFNBGPOIG_55 (original name was: gnl|Prokka|FNBGPOIG_55)

Compact view

gnlProkkaFNBGPOIG_11 - Region 1 - LAP

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Location: 7,034 - 34,477 nt. (total: 27,444 nt) Show pHMM detection rules used

Region on contig edge.

LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03604)) or TIGR03882 or TIGR03603 or TIGR03602) and not cyanobactin_synth)

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core biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFNBGPOIG_23 - Region 1 - RiPP-like

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Location: 102,341 - 114,437 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaFNBGPOIG_34 - Region 1 - RiPP-like

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Location: 71,982 - 82,278 nt. (total: 10,297 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFNBGPOIG_45 - Region 1 - T3PKS

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Location: 63,704 - 104,870 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

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resistance

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NRPS/PKS domains

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFNBGPOIG_56 - Region 1 - RiPP-like

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Location: 1,995 - 20,837 nt. (total: 18,843 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.