GCA_003458505.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHHFOALAE_1 (original name was: gnl|Prokka|HHFOALAE_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	40,424	81,590	coumermycin A1	Saccharide:Hybrid/tailoring saccharide+Other:Aminocoumarin	6%

gnlProkkaHHFOALAE_10 (original name was: gnl|Prokka|HHFOALAE_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	RiPP-like	3,877	15,973

gnlProkkaHHFOALAE_27 (original name was: gnl|Prokka|HHFOALAE_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	RiPP-like	41,392	55,568

No secondary metabolite regions were found in these records:: gnlProkkaHHFOALAE_2 (original name was: gnl|Prokka|HHFOALAE_2); gnlProkkaHHFOALAE_3 (original name was: gnl|Prokka|HHFOALAE_3); gnlProkkaHHFOALAE_4 (original name was: gnl|Prokka|HHFOALAE_4); gnlProkkaHHFOALAE_5 (original name was: gnl|Prokka|HHFOALAE_5); gnlProkkaHHFOALAE_6 (original name was: gnl|Prokka|HHFOALAE_6); gnlProkkaHHFOALAE_7 (original name was: gnl|Prokka|HHFOALAE_7); gnlProkkaHHFOALAE_8 (original name was: gnl|Prokka|HHFOALAE_8); gnlProkkaHHFOALAE_9 (original name was: gnl|Prokka|HHFOALAE_9); gnlProkkaHHFOALAE_11 (original name was: gnl|Prokka|HHFOALAE_11); gnlProkkaHHFOALAE_12 (original name was: gnl|Prokka|HHFOALAE_12); gnlProkkaHHFOALAE_13 (original name was: gnl|Prokka|HHFOALAE_13); gnlProkkaHHFOALAE_14 (original name was: gnl|Prokka|HHFOALAE_14); gnlProkkaHHFOALAE_15 (original name was: gnl|Prokka|HHFOALAE_15); gnlProkkaHHFOALAE_16 (original name was: gnl|Prokka|HHFOALAE_16); gnlProkkaHHFOALAE_17 (original name was: gnl|Prokka|HHFOALAE_17); gnlProkkaHHFOALAE_18 (original name was: gnl|Prokka|HHFOALAE_18); gnlProkkaHHFOALAE_19 (original name was: gnl|Prokka|HHFOALAE_19); gnlProkkaHHFOALAE_20 (original name was: gnl|Prokka|HHFOALAE_20); gnlProkkaHHFOALAE_21 (original name was: gnl|Prokka|HHFOALAE_21); gnlProkkaHHFOALAE_22 (original name was: gnl|Prokka|HHFOALAE_22); gnlProkkaHHFOALAE_23 (original name was: gnl|Prokka|HHFOALAE_23); gnlProkkaHHFOALAE_24 (original name was: gnl|Prokka|HHFOALAE_24); gnlProkkaHHFOALAE_26 (original name was: gnl|Prokka|HHFOALAE_26); gnlProkkaHHFOALAE_28 (original name was: gnl|Prokka|HHFOALAE_28); gnlProkkaHHFOALAE_29 (original name was: gnl|Prokka|HHFOALAE_29); gnlProkkaHHFOALAE_30 (original name was: gnl|Prokka|HHFOALAE_30); gnlProkkaHHFOALAE_31 (original name was: gnl|Prokka|HHFOALAE_31)

Compact view

gnlProkkaHHFOALAE_1 - Region 1 - T3PKS

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Location: 40,424 - 81,590 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaHHFOALAE_10 - Region 1 - RiPP-like

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Location: 3,877 - 15,973 nt. (total: 12,097 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHHFOALAE_27 - Region 1 - RiPP-like

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Location: 41,392 - 55,568 nt. (total: 14,177 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.