GCA_003458645.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIGHDCBEA_1 (original name was: gnl|Prokka|IGHDCBEA_1)

Region	Type	From	To
Region 1.1	T3PKS	65,041	106,207
Region 1.2	RiPP-like	278,793	289,065
Region 1.3	RiPP-like	363,321	382,106

gnlProkkaIGHDCBEA_12 (original name was: gnl|Prokka|IGHDCBEA_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	125,299	137,395	quinolidomicin A	Polyketide	3%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T3PKS	65,041	106,207
Region 1.2	RiPP-like	278,793	289,065
Region 1.3	RiPP-like	363,321	382,106
Region 12.1	RiPP-like	125,299	137,395	quinolidomicin A	Polyketide	3%

No secondary metabolite regions were found in these records:: gnlProkkaIGHDCBEA_2 (original name was: gnl|Prokka|IGHDCBEA_2); gnlProkkaIGHDCBEA_3 (original name was: gnl|Prokka|IGHDCBEA_3); gnlProkkaIGHDCBEA_4 (original name was: gnl|Prokka|IGHDCBEA_4); gnlProkkaIGHDCBEA_5 (original name was: gnl|Prokka|IGHDCBEA_5); gnlProkkaIGHDCBEA_6 (original name was: gnl|Prokka|IGHDCBEA_6); gnlProkkaIGHDCBEA_7 (original name was: gnl|Prokka|IGHDCBEA_7); gnlProkkaIGHDCBEA_8 (original name was: gnl|Prokka|IGHDCBEA_8); gnlProkkaIGHDCBEA_9 (original name was: gnl|Prokka|IGHDCBEA_9); gnlProkkaIGHDCBEA_10 (original name was: gnl|Prokka|IGHDCBEA_10); gnlProkkaIGHDCBEA_11 (original name was: gnl|Prokka|IGHDCBEA_11); gnlProkkaIGHDCBEA_13 (original name was: gnl|Prokka|IGHDCBEA_13); gnlProkkaIGHDCBEA_14 (original name was: gnl|Prokka|IGHDCBEA_14); gnlProkkaIGHDCBEA_15 (original name was: gnl|Prokka|IGHDCBEA_15); gnlProkkaIGHDCBEA_16 (original name was: gnl|Prokka|IGHDCBEA_16); gnlProkkaIGHDCBEA_17 (original name was: gnl|Prokka|IGHDCBEA_17); gnlProkkaIGHDCBEA_18 (original name was: gnl|Prokka|IGHDCBEA_18); gnlProkkaIGHDCBEA_19 (original name was: gnl|Prokka|IGHDCBEA_19); gnlProkkaIGHDCBEA_20 (original name was: gnl|Prokka|IGHDCBEA_20); gnlProkkaIGHDCBEA_21 (original name was: gnl|Prokka|IGHDCBEA_21); gnlProkkaIGHDCBEA_22 (original name was: gnl|Prokka|IGHDCBEA_22); gnlProkkaIGHDCBEA_23 (original name was: gnl|Prokka|IGHDCBEA_23); gnlProkkaIGHDCBEA_24 (original name was: gnl|Prokka|IGHDCBEA_24); gnlProkkaIGHDCBEA_25 (original name was: gnl|Prokka|IGHDCBEA_25); gnlProkkaIGHDCBEA_26 (original name was: gnl|Prokka|IGHDCBEA_26); gnlProkkaIGHDCBEA_27 (original name was: gnl|Prokka|IGHDCBEA_27); gnlProkkaIGHDCBEA_28 (original name was: gnl|Prokka|IGHDCBEA_28); gnlProkkaIGHDCBEA_29 (original name was: gnl|Prokka|IGHDCBEA_29); gnlProkkaIGHDCBEA_30 (original name was: gnl|Prokka|IGHDCBEA_30); gnlProkkaIGHDCBEA_31 (original name was: gnl|Prokka|IGHDCBEA_31); gnlProkkaIGHDCBEA_32 (original name was: gnl|Prokka|IGHDCBEA_32); gnlProkkaIGHDCBEA_33 (original name was: gnl|Prokka|IGHDCBEA_33); gnlProkkaIGHDCBEA_34 (original name was: gnl|Prokka|IGHDCBEA_34); gnlProkkaIGHDCBEA_35 (original name was: gnl|Prokka|IGHDCBEA_35); gnlProkkaIGHDCBEA_36 (original name was: gnl|Prokka|IGHDCBEA_36); gnlProkkaIGHDCBEA_37 (original name was: gnl|Prokka|IGHDCBEA_37); gnlProkkaIGHDCBEA_38 (original name was: gnl|Prokka|IGHDCBEA_38); gnlProkkaIGHDCBEA_39 (original name was: gnl|Prokka|IGHDCBEA_39); gnlProkkaIGHDCBEA_45 (original name was: gnl|Prokka|IGHDCBEA_45); gnlProkkaIGHDCBEA_48 (original name was: gnl|Prokka|IGHDCBEA_48); gnlProkkaIGHDCBEA_49 (original name was: gnl|Prokka|IGHDCBEA_49); gnlProkkaIGHDCBEA_50 (original name was: gnl|Prokka|IGHDCBEA_50); gnlProkkaIGHDCBEA_51 (original name was: gnl|Prokka|IGHDCBEA_51)

Compact view

gnlProkkaIGHDCBEA_1 - Region 1 - T3PKS

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Location: 65,041 - 106,207 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIGHDCBEA_1 - Region 2 - RiPP-like

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Location: 278,793 - 289,065 nt. (total: 10,273 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIGHDCBEA_1 - Region 3 - RiPP-like

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Location: 363,321 - 382,106 nt. (total: 18,786 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIGHDCBEA_12 - Region 1 - RiPP-like

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Location: 125,299 - 137,395 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1