GCA_003459425.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNJPHLNLP_7 (original name was: gnl|Prokka|NJPHLNLP_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RRE-containing	1	13,796

gnlProkkaNJPHLNLP_11 (original name was: gnl|Prokka|NJPHLNLP_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	arylpolyene	68,414	114,272	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 7.1	RRE-containing	1	13,796
Region 11.1	arylpolyene	68,414	114,272	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaNJPHLNLP_1 (original name was: gnl|Prokka|NJPHLNLP_1); gnlProkkaNJPHLNLP_2 (original name was: gnl|Prokka|NJPHLNLP_2); gnlProkkaNJPHLNLP_3 (original name was: gnl|Prokka|NJPHLNLP_3); gnlProkkaNJPHLNLP_4 (original name was: gnl|Prokka|NJPHLNLP_4); gnlProkkaNJPHLNLP_5 (original name was: gnl|Prokka|NJPHLNLP_5); gnlProkkaNJPHLNLP_6 (original name was: gnl|Prokka|NJPHLNLP_6); gnlProkkaNJPHLNLP_8 (original name was: gnl|Prokka|NJPHLNLP_8); gnlProkkaNJPHLNLP_9 (original name was: gnl|Prokka|NJPHLNLP_9); gnlProkkaNJPHLNLP_10 (original name was: gnl|Prokka|NJPHLNLP_10); gnlProkkaNJPHLNLP_12 (original name was: gnl|Prokka|NJPHLNLP_12); gnlProkkaNJPHLNLP_13 (original name was: gnl|Prokka|NJPHLNLP_13); gnlProkkaNJPHLNLP_14 (original name was: gnl|Prokka|NJPHLNLP_14); gnlProkkaNJPHLNLP_15 (original name was: gnl|Prokka|NJPHLNLP_15); gnlProkkaNJPHLNLP_16 (original name was: gnl|Prokka|NJPHLNLP_16); gnlProkkaNJPHLNLP_17 (original name was: gnl|Prokka|NJPHLNLP_17); gnlProkkaNJPHLNLP_18 (original name was: gnl|Prokka|NJPHLNLP_18); gnlProkkaNJPHLNLP_19 (original name was: gnl|Prokka|NJPHLNLP_19); gnlProkkaNJPHLNLP_20 (original name was: gnl|Prokka|NJPHLNLP_20); gnlProkkaNJPHLNLP_21 (original name was: gnl|Prokka|NJPHLNLP_21); gnlProkkaNJPHLNLP_22 (original name was: gnl|Prokka|NJPHLNLP_22); gnlProkkaNJPHLNLP_23 (original name was: gnl|Prokka|NJPHLNLP_23); gnlProkkaNJPHLNLP_24 (original name was: gnl|Prokka|NJPHLNLP_24); gnlProkkaNJPHLNLP_25 (original name was: gnl|Prokka|NJPHLNLP_25); gnlProkkaNJPHLNLP_26 (original name was: gnl|Prokka|NJPHLNLP_26); gnlProkkaNJPHLNLP_27 (original name was: gnl|Prokka|NJPHLNLP_27); gnlProkkaNJPHLNLP_28 (original name was: gnl|Prokka|NJPHLNLP_28); gnlProkkaNJPHLNLP_29 (original name was: gnl|Prokka|NJPHLNLP_29); gnlProkkaNJPHLNLP_30 (original name was: gnl|Prokka|NJPHLNLP_30); gnlProkkaNJPHLNLP_31 (original name was: gnl|Prokka|NJPHLNLP_31); gnlProkkaNJPHLNLP_32 (original name was: gnl|Prokka|NJPHLNLP_32); gnlProkkaNJPHLNLP_33 (original name was: gnl|Prokka|NJPHLNLP_33); gnlProkkaNJPHLNLP_34 (original name was: gnl|Prokka|NJPHLNLP_34); gnlProkkaNJPHLNLP_35 (original name was: gnl|Prokka|NJPHLNLP_35); gnlProkkaNJPHLNLP_36 (original name was: gnl|Prokka|NJPHLNLP_36); gnlProkkaNJPHLNLP_37 (original name was: gnl|Prokka|NJPHLNLP_37); gnlProkkaNJPHLNLP_38 (original name was: gnl|Prokka|NJPHLNLP_38); gnlProkkaNJPHLNLP_39 (original name was: gnl|Prokka|NJPHLNLP_39); gnlProkkaNJPHLNLP_40 (original name was: gnl|Prokka|NJPHLNLP_40); gnlProkkaNJPHLNLP_41 (original name was: gnl|Prokka|NJPHLNLP_41); gnlProkkaNJPHLNLP_42 (original name was: gnl|Prokka|NJPHLNLP_42); gnlProkkaNJPHLNLP_43 (original name was: gnl|Prokka|NJPHLNLP_43); gnlProkkaNJPHLNLP_44 (original name was: gnl|Prokka|NJPHLNLP_44); gnlProkkaNJPHLNLP_45 (original name was: gnl|Prokka|NJPHLNLP_45); gnlProkkaNJPHLNLP_46 (original name was: gnl|Prokka|NJPHLNLP_46); gnlProkkaNJPHLNLP_47 (original name was: gnl|Prokka|NJPHLNLP_47); gnlProkkaNJPHLNLP_48 (original name was: gnl|Prokka|NJPHLNLP_48); gnlProkkaNJPHLNLP_49 (original name was: gnl|Prokka|NJPHLNLP_49); gnlProkkaNJPHLNLP_50 (original name was: gnl|Prokka|NJPHLNLP_50); gnlProkkaNJPHLNLP_51 (original name was: gnl|Prokka|NJPHLNLP_51); gnlProkkaNJPHLNLP_52 (original name was: gnl|Prokka|NJPHLNLP_52); gnlProkkaNJPHLNLP_53 (original name was: gnl|Prokka|NJPHLNLP_53); gnlProkkaNJPHLNLP_54 (original name was: gnl|Prokka|NJPHLNLP_54); gnlProkkaNJPHLNLP_55 (original name was: gnl|Prokka|NJPHLNLP_55); gnlProkkaNJPHLNLP_56 (original name was: gnl|Prokka|NJPHLNLP_56); gnlProkkaNJPHLNLP_57 (original name was: gnl|Prokka|NJPHLNLP_57); gnlProkkaNJPHLNLP_58 (original name was: gnl|Prokka|NJPHLNLP_58); gnlProkkaNJPHLNLP_59 (original name was: gnl|Prokka|NJPHLNLP_59); gnlProkkaNJPHLNLP_60 (original name was: gnl|Prokka|NJPHLNLP_60); gnlProkkaNJPHLNLP_61 (original name was: gnl|Prokka|NJPHLNLP_61); gnlProkkaNJPHLNLP_62 (original name was: gnl|Prokka|NJPHLNLP_62); gnlProkkaNJPHLNLP_63 (original name was: gnl|Prokka|NJPHLNLP_63); gnlProkkaNJPHLNLP_64 (original name was: gnl|Prokka|NJPHLNLP_64); gnlProkkaNJPHLNLP_65 (original name was: gnl|Prokka|NJPHLNLP_65); gnlProkkaNJPHLNLP_66 (original name was: gnl|Prokka|NJPHLNLP_66); gnlProkkaNJPHLNLP_67 (original name was: gnl|Prokka|NJPHLNLP_67); gnlProkkaNJPHLNLP_68 (original name was: gnl|Prokka|NJPHLNLP_68); gnlProkkaNJPHLNLP_69 (original name was: gnl|Prokka|NJPHLNLP_69); gnlProkkaNJPHLNLP_70 (original name was: gnl|Prokka|NJPHLNLP_70); gnlProkkaNJPHLNLP_71 (original name was: gnl|Prokka|NJPHLNLP_71); gnlProkkaNJPHLNLP_72 (original name was: gnl|Prokka|NJPHLNLP_72); gnlProkkaNJPHLNLP_73 (original name was: gnl|Prokka|NJPHLNLP_73); gnlProkkaNJPHLNLP_74 (original name was: gnl|Prokka|NJPHLNLP_74); gnlProkkaNJPHLNLP_75 (original name was: gnl|Prokka|NJPHLNLP_75); gnlProkkaNJPHLNLP_76 (original name was: gnl|Prokka|NJPHLNLP_76); gnlProkkaNJPHLNLP_77 (original name was: gnl|Prokka|NJPHLNLP_77); gnlProkkaNJPHLNLP_78 (original name was: gnl|Prokka|NJPHLNLP_78); gnlProkkaNJPHLNLP_79 (original name was: gnl|Prokka|NJPHLNLP_79); gnlProkkaNJPHLNLP_80 (original name was: gnl|Prokka|NJPHLNLP_80); gnlProkkaNJPHLNLP_89 (original name was: gnl|Prokka|NJPHLNLP_89)

Compact view

gnlProkkaNJPHLNLP_7 - Region 1 - RRE-containing

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Location: 1 - 13,796 nt. (total: 13,796 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNJPHLNLP_11 - Region 1 - arylpolyene

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Location: 68,414 - 114,272 nt. (total: 45,859 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg11_71

AMP-binding (46..335): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)