GCA_003463615.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEGHPGCKA_57 (original name was: gnl|Prokka|EGHPGCKA_57)

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	NRPS-like	19,292	62,303

Region	Type	From	To	Most similar known cluster	Similarity
Region 43.1	NRPS-like	19,292	62,303

No secondary metabolite regions were found in these records:: gnlProkkaEGHPGCKA_1 (original name was: gnl|Prokka|EGHPGCKA_1); gnlProkkaEGHPGCKA_2 (original name was: gnl|Prokka|EGHPGCKA_2); gnlProkkaEGHPGCKA_3 (original name was: gnl|Prokka|EGHPGCKA_3); gnlProkkaEGHPGCKA_4 (original name was: gnl|Prokka|EGHPGCKA_4); gnlProkkaEGHPGCKA_5 (original name was: gnl|Prokka|EGHPGCKA_5); gnlProkkaEGHPGCKA_6 (original name was: gnl|Prokka|EGHPGCKA_6); gnlProkkaEGHPGCKA_7 (original name was: gnl|Prokka|EGHPGCKA_7); gnlProkkaEGHPGCKA_8 (original name was: gnl|Prokka|EGHPGCKA_8); gnlProkkaEGHPGCKA_9 (original name was: gnl|Prokka|EGHPGCKA_9); gnlProkkaEGHPGCKA_10 (original name was: gnl|Prokka|EGHPGCKA_10); gnlProkkaEGHPGCKA_11 (original name was: gnl|Prokka|EGHPGCKA_11); gnlProkkaEGHPGCKA_12 (original name was: gnl|Prokka|EGHPGCKA_12); gnlProkkaEGHPGCKA_13 (original name was: gnl|Prokka|EGHPGCKA_13); gnlProkkaEGHPGCKA_14 (original name was: gnl|Prokka|EGHPGCKA_14); gnlProkkaEGHPGCKA_15 (original name was: gnl|Prokka|EGHPGCKA_15); gnlProkkaEGHPGCKA_16 (original name was: gnl|Prokka|EGHPGCKA_16); gnlProkkaEGHPGCKA_17 (original name was: gnl|Prokka|EGHPGCKA_17); gnlProkkaEGHPGCKA_18 (original name was: gnl|Prokka|EGHPGCKA_18); gnlProkkaEGHPGCKA_19 (original name was: gnl|Prokka|EGHPGCKA_19); gnlProkkaEGHPGCKA_20 (original name was: gnl|Prokka|EGHPGCKA_20); gnlProkkaEGHPGCKA_21 (original name was: gnl|Prokka|EGHPGCKA_21); gnlProkkaEGHPGCKA_22 (original name was: gnl|Prokka|EGHPGCKA_22); gnlProkkaEGHPGCKA_23 (original name was: gnl|Prokka|EGHPGCKA_23); gnlProkkaEGHPGCKA_24 (original name was: gnl|Prokka|EGHPGCKA_24); gnlProkkaEGHPGCKA_25 (original name was: gnl|Prokka|EGHPGCKA_25); gnlProkkaEGHPGCKA_26 (original name was: gnl|Prokka|EGHPGCKA_26); gnlProkkaEGHPGCKA_27 (original name was: gnl|Prokka|EGHPGCKA_27); gnlProkkaEGHPGCKA_28 (original name was: gnl|Prokka|EGHPGCKA_28); gnlProkkaEGHPGCKA_29 (original name was: gnl|Prokka|EGHPGCKA_29); gnlProkkaEGHPGCKA_30 (original name was: gnl|Prokka|EGHPGCKA_30); gnlProkkaEGHPGCKA_31 (original name was: gnl|Prokka|EGHPGCKA_31); gnlProkkaEGHPGCKA_32 (original name was: gnl|Prokka|EGHPGCKA_32); gnlProkkaEGHPGCKA_33 (original name was: gnl|Prokka|EGHPGCKA_33); gnlProkkaEGHPGCKA_34 (original name was: gnl|Prokka|EGHPGCKA_34); gnlProkkaEGHPGCKA_35 (original name was: gnl|Prokka|EGHPGCKA_35); gnlProkkaEGHPGCKA_36 (original name was: gnl|Prokka|EGHPGCKA_36); gnlProkkaEGHPGCKA_37 (original name was: gnl|Prokka|EGHPGCKA_37); gnlProkkaEGHPGCKA_38 (original name was: gnl|Prokka|EGHPGCKA_38); gnlProkkaEGHPGCKA_45 (original name was: gnl|Prokka|EGHPGCKA_45); gnlProkkaEGHPGCKA_54 (original name was: gnl|Prokka|EGHPGCKA_54); gnlProkkaEGHPGCKA_55 (original name was: gnl|Prokka|EGHPGCKA_55); gnlProkkaEGHPGCKA_56 (original name was: gnl|Prokka|EGHPGCKA_56)

Compact view

gnlProkkaEGHPGCKA_57 - Region 1 - NRPS-like

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Location: 19,292 - 62,303 nt. (total: 43,012 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 19291 - 62303:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg43_42

AMP-binding (14..381): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DFFTIGIIYK
Nearest Stachelhaus code(s):: Ile DFWNIGIIYK (56% 8Å match)
Stachelhaus code match:: 80% (moderate)