GCA_003467505.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFMBDIODF_30 (original name was: gnl|Prokka|FMBDIODF_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	phosphonate	235,166	273,800	polysaccharide B	Saccharide	16%

gnlProkkaFMBDIODF_32 (original name was: gnl|Prokka|FMBDIODF_32)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RRE-containing	82,751	103,104

No secondary metabolite regions were found in these records:: gnlProkkaFMBDIODF_1 (original name was: gnl|Prokka|FMBDIODF_1); gnlProkkaFMBDIODF_2 (original name was: gnl|Prokka|FMBDIODF_2); gnlProkkaFMBDIODF_3 (original name was: gnl|Prokka|FMBDIODF_3); gnlProkkaFMBDIODF_4 (original name was: gnl|Prokka|FMBDIODF_4); gnlProkkaFMBDIODF_5 (original name was: gnl|Prokka|FMBDIODF_5); gnlProkkaFMBDIODF_6 (original name was: gnl|Prokka|FMBDIODF_6); gnlProkkaFMBDIODF_7 (original name was: gnl|Prokka|FMBDIODF_7); gnlProkkaFMBDIODF_8 (original name was: gnl|Prokka|FMBDIODF_8); gnlProkkaFMBDIODF_9 (original name was: gnl|Prokka|FMBDIODF_9); gnlProkkaFMBDIODF_10 (original name was: gnl|Prokka|FMBDIODF_10); gnlProkkaFMBDIODF_11 (original name was: gnl|Prokka|FMBDIODF_11); gnlProkkaFMBDIODF_12 (original name was: gnl|Prokka|FMBDIODF_12); gnlProkkaFMBDIODF_13 (original name was: gnl|Prokka|FMBDIODF_13); gnlProkkaFMBDIODF_14 (original name was: gnl|Prokka|FMBDIODF_14); gnlProkkaFMBDIODF_15 (original name was: gnl|Prokka|FMBDIODF_15); gnlProkkaFMBDIODF_16 (original name was: gnl|Prokka|FMBDIODF_16); gnlProkkaFMBDIODF_17 (original name was: gnl|Prokka|FMBDIODF_17); gnlProkkaFMBDIODF_18 (original name was: gnl|Prokka|FMBDIODF_18); gnlProkkaFMBDIODF_19 (original name was: gnl|Prokka|FMBDIODF_19); gnlProkkaFMBDIODF_20 (original name was: gnl|Prokka|FMBDIODF_20); gnlProkkaFMBDIODF_21 (original name was: gnl|Prokka|FMBDIODF_21); gnlProkkaFMBDIODF_22 (original name was: gnl|Prokka|FMBDIODF_22); gnlProkkaFMBDIODF_23 (original name was: gnl|Prokka|FMBDIODF_23); gnlProkkaFMBDIODF_24 (original name was: gnl|Prokka|FMBDIODF_24); gnlProkkaFMBDIODF_25 (original name was: gnl|Prokka|FMBDIODF_25); gnlProkkaFMBDIODF_26 (original name was: gnl|Prokka|FMBDIODF_26); gnlProkkaFMBDIODF_27 (original name was: gnl|Prokka|FMBDIODF_27); gnlProkkaFMBDIODF_28 (original name was: gnl|Prokka|FMBDIODF_28); gnlProkkaFMBDIODF_31 (original name was: gnl|Prokka|FMBDIODF_31); gnlProkkaFMBDIODF_33 (original name was: gnl|Prokka|FMBDIODF_33); gnlProkkaFMBDIODF_34 (original name was: gnl|Prokka|FMBDIODF_34); gnlProkkaFMBDIODF_35 (original name was: gnl|Prokka|FMBDIODF_35)

Compact view

gnlProkkaFMBDIODF_30 - Region 1 - phosphonate

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Location: 235,166 - 273,800 nt. (total: 38,635 nt) Show pHMM detection rules used

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaFMBDIODF_32 - Region 1 - RRE-containing

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Location: 82,751 - 103,104 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.