Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_003467985.1	Bifidobacterium bifidum	AM42-15AC	SAMN09736543	2014-01-01	China: Shenzhen	Homo sapiens	0	4	0	0	4.00
2	GCA_003437945.1	Bifidobacterium bifidum	TF05-1	SAMN09736871	2013-08-01	China: Shenzhen	Homo sapiens	651	3	0	0	3.00
3	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	2013-08-01	China: Shenzhen	Homo sapiens	698	4	0	0	4.00
4	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	2013-08-01	China: Shenzhen	Homo sapiens	699	4	0	0	4.00
5	GCA_003436635.1	Bifidobacterium bifidum	TM02-17	SAMN09736965	2012-11-01	China: Shenzhen	Homo sapiens	754	4	0	0	4.00
6	GCA_003436655.1	Bifidobacterium bifidum	TM02-15	SAMN09736964	2012-11-01	China: Shenzhen	Homo sapiens	754	4	0	0	4.00
7	GCA_003473145.1	Bifidobacterium bifidum	AM12-9	SAMN09734792	2013-08-01	China: Shenzhen	Homo sapiens	791	4	0	0	4.00
8	GCA_003472345.1	Bifidobacterium bifidum	AM12-10	SAMN09734784	2013-08-01	China: Shenzhen	Homo sapiens	792	4	0	0	4.00
9	GCA_003465425.1	Bifidobacterium bifidum	AF11-25B	SAMN09734209	2013-10-01	China: Shenzhen	Homo sapiens	797	4	0	0	4.00
10	GCA_045635495.1	Bifidobacterium bifidum	CGMCC No.29545	SAMN44616490	2023-05-01	China:Hangzhou	Homo sapiens	975	2	0	0	2.00
11	GCA_003437345.1	Bifidobacterium bifidum	TF06-13	SAMN09736889	2013-08-01	China: Shenzhen	Homo sapiens	996	3	0	0	3.00
12	GCA_003437325.1	Bifidobacterium bifidum	TF06-14AC	SAMN09736890	2013-08-01	China: Shenzhen	Homo sapiens	997	3	0	0	3.00
13	GCA_019734315.1	Bifidobacterium bifidum	K05	SAMN14389522	2020-03-01	China	Homo sapiens	1029	3	0	0	3.00
14	GCA_003468415.1	Bifidobacterium bifidum	AM36-1AC	SAMN09736479	2013-12-01	China: Shenzhen	Homo sapiens	1033	2	0	0	2.00
15	GCA_003436135.1	Bifidobacterium bifidum	TM07-4AC	SAMN09737006	2014-02-01	China: Shenzhen	Homo sapiens	1036	4	0	0	4.00
16	GCA_003436575.1	Bifidobacterium bifidum	TM04-12	SAMN09736968	2013-08-01	China: Shenzhen	Homo sapiens	1044	3	0	0	3.00
17	GCA_003470615.1	Bifidobacterium bifidum	AM18-12AC	SAMN09734861	2013-10-01	China: Shenzhen	Homo sapiens	1058	3	0	0	3.00
18	GCA_003471555.1	Bifidobacterium bifidum	AM18-11	SAMN09734860	2013-09-01	China: Shenzhen	Homo sapiens	1058	3	0	0	3.00
19	GCA_003471595.1	Bifidobacterium bifidum	AM18-1	SAMN09734857	2013-09-01	China: Shenzhen	Homo sapiens	1058	2	0	0	2.00
20	GCA_003470585.1	Bifidobacterium bifidum	AM18-29	SAMN09734868	2013-09-01	China: Shenzhen	Homo sapiens	1059	2	0	0	2.00
21	GCA_045290295.1	Bifidobacterium bifidum	lw02	SAMN39525295	2017-10-12	China	Homo sapiens	1060	4	0	0	4.00
22	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	2016-04-25	USA	Homo sapiens	1065	2	0	0	2.00
23	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	-	-	Homo sapiens	1071	2	0	0	2.00
24	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	-	SAMD00061040	-	-	-	1071	2	0	0	2.00
25	GCA_003437175.1	Bifidobacterium bifidum	TF07-22	SAMN09736904	2013-08-01	China: Shenzhen	Homo sapiens	1071	4	0	0	4.00
26	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	2020-07-20	-	-	1071	2	0	0	2.00
27	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	2008-03-17	India: Unique Biotech Limited, Hyderabad	Homo sapiens	1071	2	0	0	2.00
28	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	2011-11	China: Neimenggu	Homo sapiens	1071	2	0	0	2.00
29	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	-	-	1071	2	0	0	2.00
30	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	-	-	1073	2	0	0	2.00
31	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	-	-	Homo sapiens	1074	2	0	0	2.00
32	GCA_011029205.1	Bifidobacterium bifidum	VA07-1AN	SAMN14087237	2015-08	Thailand: Khon Kean	Homo sapiens	1075	4	0	0	4.00
33	GCA_003437785.1	Bifidobacterium bifidum	TF05-39	SAMN09736884	2013-08-01	China: Shenzhen	Homo sapiens	1076	4	0	0	4.00
34	GCA_003466485.1	Bifidobacterium bifidum	TM05-15	SAMN09736979	2013-08-01	China: Shenzhen	Homo sapiens	1076	4	0	0	4.00
35	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	1977	Russia: Moscow	Homo sapiens	1077	1	0	0	1.00
36	GCA_003390735.1	Bifidobacterium bifidum	S6	SAMN07484235	2017-04-04	South Korea: Bundang	Homo sapiens	1077	2	0	0	2.00
37	GCA_028202055.1	Bifidobacterium bifidum	D31st1_E7_D31t1_170403	SAMN31321363	2017-04-03	USA	Homo sapiens	1078	2	0	0	2.00
38	GCA_028202075.1	Bifidobacterium bifidum	D31st1_A3_D31t1_170403	SAMN31321361	2017-04-03	USA	Homo sapiens	1078	2	0	0	2.00
39	GCA_028202095.1	Bifidobacterium bifidum	D31st1_B4_D31t1_170403	SAMN31321362	2017-04-03	USA	Homo sapiens	1078	2	0	0	2.00
40	GCA_028201935.1	Bifidobacterium bifidum	1025st1_E4_1025SCRN_200924	SAMN31321351	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
41	GCA_028202225.1	Bifidobacterium bifidum	1025st1_F12_1025SCRN_200924	SAMN31321352	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
42	GCA_028202255.1	Bifidobacterium bifidum	1025st1_B5_1025SCRN_200924	SAMN31321348	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
43	GCA_028202265.1	Bifidobacterium bifidum	1025st1_D2_1025SCRN_200924	SAMN31321350	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
44	GCA_028202305.1	Bifidobacterium bifidum	1025st1_A12_1025SCRN_200924	SAMN31321347	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
45	GCA_039913395.1	Bifidobacterium bifidum	1025st1_C5_1025SCRN_200924	SAMN31321349	2020-09-24	USA	Homo sapiens	1079	2	0	0	2.00
46	GCA_003474045.1	Bifidobacterium bifidum	AF45-10	SAMN09734712	2014-04-01	China: Shenzhen	Homo sapiens	1080	2	0	0	2.00
47	GCA_040094955.1	Bifidobacterium bifidum	CLA-AA-H198	SAMN40631356	2020-07-20	Germany:Aachen	Homo sapiens	1080	2	0	0	2.00
48	GCA_000265095.1	Bifidobacterium bifidum BGN4	BGN4	SAMN02603486	-	South Korea	Homo sapiens	1081	2	0	0	2.00
49	GCA_002076105.1	Bifidobacterium bifidum	1887B	SAMN06621707	-	Italy	Homo sapiens	1081	2	0	0	2.00
50	GCA_016838705.1	Bifidobacterium bifidum	HN002	SAMN17735950	2017-06-08	South Korea: Jeongup	Homo sapiens	1081	2	0	0	2.00
51	GCA_028203495.1	Bifidobacterium bifidum	RTP21484st2_A9_RTP21484_190118	SAMN31321414	2019-01-18	USA	Homo sapiens	1081	2	0	0	2.00
52	GCA_028368265.1	Bifidobacterium bifidum	RTP21484st2_G9_RTP21484_190118	SAMN31321246	2019-01-18	USA	Homo sapiens	1081	2	0	0	2.00
53	GCA_001405355.1	Bifidobacterium bifidum	2789STDY5608877	SAMEA3545285	2013	United Kingdom	Homo sapiens	1082	2	0	0	2.00
54	GCA_009078055.1	Bifidobacterium bifidum	BIOML-A11	SAMN11944601	2015-12-09	USA:Boston	Homo sapiens	1082	2	0	0	2.00
55	GCA_009078115.1	Bifidobacterium bifidum	BIOML-A10	SAMN11944600	2015-12-09	USA:Boston	Homo sapiens	1082	2	0	0	2.00
56	GCA_009159095.1	Bifidobacterium bifidum	BIOML-A21	SAMN11944611	2015-12-09	USA:Boston	Homo sapiens	1082	2	0	0	2.00
57	GCA_009159495.1	Bifidobacterium bifidum	BIOML-A24	SAMN11944614	2015-12-09	USA:Boston	Homo sapiens	1082	2	1	0	2.24
58	GCA_009159505.1	Bifidobacterium bifidum	BIOML-A20	SAMN11944610	2015-12-09	USA:Boston	Homo sapiens	1082	2	0	0	2.00
59	GCA_009159555.1	Bifidobacterium bifidum	BIOML-A19	SAMN11944609	2015-12-09	USA:Boston	Homo sapiens	1082	3	1	0	3.16
60	GCA_009160825.1	Bifidobacterium bifidum	BIOML-A25	SAMN11944615	2015-12-09	USA:Boston	Homo sapiens	1082	3	0	0	3.00
61	GCA_009160885.1	Bifidobacterium bifidum	BIOML-A14	SAMN11944604	2015-12-09	USA:Boston	Homo sapiens	1082	2	0	0	2.00
62	GCA_009160905.1	Bifidobacterium bifidum	BIOML-A12	SAMN11944602	2015-12-09	USA:Boston	Homo sapiens	1082	2	0	0	2.00
63	GCA_009160915.1	Bifidobacterium bifidum	BIOML-A15	SAMN11944605	2015-12-09	USA:Boston	Homo sapiens	1082	2	0	0	2.00
64	GCA_009160945.1	Bifidobacterium bifidum	BIOML-A13	SAMN11944603	2015-12-09	USA:Boston	Homo sapiens	1083	2	0	0	2.00
65	GCA_028201965.1	Bifidobacterium bifidum	2226st1_E4_2226SCRN_200925	SAMN31321353	2020-09-25	USA	Homo sapiens	1083	2	0	0	2.00
66	GCA_025506295.1	Bifidobacterium bifidum	20	SAMN12565454	2019-04-01	United Kingdom	Homo sapiens	1084	2	0	0	2.00
67	GCA_027215325.1	Bifidobacterium bifidum	SDS-1425-OWp	SAMN32244237	2019-07-10	Canada: Vancouver	Homo sapiens	1084	2	0	0	2.00
68	GCA_027215545.1	Bifidobacterium bifidum	SDS-1424-OWp	SAMN32244263	2019-06-28	Canada: Vancouver	Homo sapiens	1084	2	0	0	2.00
69	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	2020-02-17	USA	Homo sapiens	1084	2	0	0	2.00
70	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	2020-02-17	USA	Homo sapiens	1084	2	0	0	2.00
71	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	2020-02-17	USA	Homo sapiens	1084	2	0	0	2.00
72	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	2016-11-14	USA	Homo sapiens	1084	2	0	0	2.00
73	GCA_028202165.1	Bifidobacterium bifidum	1001283st1_F3_1001283B150210_160208	SAMN31321344	2016-02-08	USA	Homo sapiens	1084	2	0	0	2.00
74	GCA_028202215.1	Bifidobacterium bifidum	1001283st1_F5_1001283B150209_150212	SAMN31321345	2015-02-12	USA	Homo sapiens	1084	2	0	0	2.00
75	GCA_028202335.1	Bifidobacterium bifidum	1001283st1_A1_1001285H_161024	SAMN31321336	2016-10-24	USA	Homo sapiens	1084	3	0	0	3.00
76	GCA_028202355.1	Bifidobacterium bifidum	1001283st1_E8_1001285I_161205	SAMN31321342	2016-12-05	USA	Homo sapiens	1084	3	0	0	3.00
77	GCA_028202365.1	Bifidobacterium bifidum	1001283st1_B11_1001285I_161205	SAMN31321337	2016-12-05	USA	Homo sapiens	1084	3	0	0	3.00
78	GCA_028202575.1	Bifidobacterium bifidum	1001283st1_E8_1001283B150210_160208	SAMN31321341	2016-02-08	USA	Homo sapiens	1084	2	0	0	2.00
79	GCA_028202605.1	Bifidobacterium bifidum	1001283st1_D6_1001283B150209_150212	SAMN31321340	2015-02-12	USA	Homo sapiens	1084	2	0	0	2.00
80	GCA_028202725.1	Bifidobacterium bifidum	1001283st1_C8_1001283B150304_161114	SAMN31321339	2016-11-14	USA	Homo sapiens	1084	2	0	0	2.00
81	GCA_028203615.1	Bifidobacterium bifidum	A12_h1001283B150217_200217	SAMN31321372	2020-02-17	USA	Homo sapiens	1084	2	0	0	2.00
82	GCA_028203705.1	Bifidobacterium bifidum	G10_h1001283B150217_200217	SAMN31321380	2020-02-17	USA	Homo sapiens	1084	2	0	0	2.00
83	GCA_028203745.1	Bifidobacterium bifidum	G8_h1001283B150217_200217	SAMN31321379	2020-02-17	USA	Homo sapiens	1084	2	0	0	2.00
84	GCA_028203775.1	Bifidobacterium bifidum	F11_h1001283B150217_200217	SAMN31321378	2020-02-17	USA	Homo sapiens	1084	2	0	0	2.00
85	GCA_028203795.1	Bifidobacterium bifidum	C4_h1001283B150217_200217	SAMN31321375	2020-02-17	USA	Homo sapiens	1084	2	0	0	2.00
86	GCA_028203875.1	Bifidobacterium bifidum	H3_h1001283B150217_200217	SAMN31321371	2020-02-17	USA	Homo sapiens	1084	2	0	0	2.00
87	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	2020-08-14	USA	Homo sapiens	1084	2	0	0	2.00
88	GCA_039913355.1	Bifidobacterium bifidum	2226st1_G9_2226SCRN_200925	SAMN31321354	2020-09-25	USA	Homo sapiens	1084	2	0	0	2.00
89	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	2017-09-25	USA	Homo sapiens	1085	2	0	0	2.00
90	GCA_028202155.1	Bifidobacterium bifidum	1001283st1_G4_1001283B150217_161031	SAMN31321346	2016-10-31	USA	Homo sapiens	1085	2	0	0	2.00
91	GCA_028202295.1	Bifidobacterium bifidum	1001283st1_C1_1001283B150225_161107	SAMN31321338	2016-11-07	USA	Homo sapiens	1085	2	0	0	2.00
92	GCA_028202555.1	Bifidobacterium bifidum	B6_h1001283B150217_200217	SAMN31321373	2020-02-17	USA	Homo sapiens	1085	2	0	0	2.00
93	GCA_028203815.1	Bifidobacterium bifidum	F5_h1001283B150217_200217	SAMN31321376	2020-02-17	USA	Homo sapiens	1085	2	0	0	2.00
94	GCA_028203895.1	Bifidobacterium bifidum	H2_h1001283B150217_200217	SAMN31321370	2020-02-17	USA	Homo sapiens	1085	2	0	0	2.00
95	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	2020-08-14	USA	Homo sapiens	1085	2	0	0	2.00
96	GCA_039913365.1	Bifidobacterium bifidum	C1_h1001283B150217_200217	SAMN31321374	2020-02-17	USA	Homo sapiens	1085	3	0	1	3.16
97	GCA_028202395.1	Bifidobacterium bifidum	J1101312st1_E10_J1101312_190322	SAMN31321382	2019-03-22	USA	Homo sapiens	1086	2	0	0	2.00
98	GCA_028203735.1	Bifidobacterium bifidum	F6_h1001283B150217_200217	SAMN31321377	2020-02-17	USA	Homo sapiens	1086	2	0	0	2.00
99	GCA_001546225.1	Bifidobacterium bifidum	MJR8628B	SAMN03842220	-	-	Homo sapiens	1087	2	0	0	2.00
100	GCA_028202185.1	Bifidobacterium bifidum	BSD2780061688st1_D1_BSD2780061688b_171218	SAMN31321359	2017-12-18	USA	Homo sapiens	1087	3	0	0	3.00