GCA_003468475.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLPEOICLM_32 (original name was: gnl|Prokka|LPEOICLM_32)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	ranthipeptide	17,801	39,572

No secondary metabolite regions were found in these records:: gnlProkkaLPEOICLM_1 (original name was: gnl|Prokka|LPEOICLM_1); gnlProkkaLPEOICLM_2 (original name was: gnl|Prokka|LPEOICLM_2); gnlProkkaLPEOICLM_3 (original name was: gnl|Prokka|LPEOICLM_3); gnlProkkaLPEOICLM_4 (original name was: gnl|Prokka|LPEOICLM_4); gnlProkkaLPEOICLM_5 (original name was: gnl|Prokka|LPEOICLM_5); gnlProkkaLPEOICLM_6 (original name was: gnl|Prokka|LPEOICLM_6); gnlProkkaLPEOICLM_7 (original name was: gnl|Prokka|LPEOICLM_7); gnlProkkaLPEOICLM_8 (original name was: gnl|Prokka|LPEOICLM_8); gnlProkkaLPEOICLM_9 (original name was: gnl|Prokka|LPEOICLM_9); gnlProkkaLPEOICLM_10 (original name was: gnl|Prokka|LPEOICLM_10); gnlProkkaLPEOICLM_11 (original name was: gnl|Prokka|LPEOICLM_11); gnlProkkaLPEOICLM_12 (original name was: gnl|Prokka|LPEOICLM_12); gnlProkkaLPEOICLM_13 (original name was: gnl|Prokka|LPEOICLM_13); gnlProkkaLPEOICLM_14 (original name was: gnl|Prokka|LPEOICLM_14); gnlProkkaLPEOICLM_15 (original name was: gnl|Prokka|LPEOICLM_15); gnlProkkaLPEOICLM_16 (original name was: gnl|Prokka|LPEOICLM_16); gnlProkkaLPEOICLM_17 (original name was: gnl|Prokka|LPEOICLM_17); gnlProkkaLPEOICLM_18 (original name was: gnl|Prokka|LPEOICLM_18); gnlProkkaLPEOICLM_19 (original name was: gnl|Prokka|LPEOICLM_19); gnlProkkaLPEOICLM_20 (original name was: gnl|Prokka|LPEOICLM_20); gnlProkkaLPEOICLM_21 (original name was: gnl|Prokka|LPEOICLM_21); gnlProkkaLPEOICLM_22 (original name was: gnl|Prokka|LPEOICLM_22); gnlProkkaLPEOICLM_23 (original name was: gnl|Prokka|LPEOICLM_23); gnlProkkaLPEOICLM_24 (original name was: gnl|Prokka|LPEOICLM_24); gnlProkkaLPEOICLM_25 (original name was: gnl|Prokka|LPEOICLM_25); gnlProkkaLPEOICLM_26 (original name was: gnl|Prokka|LPEOICLM_26); gnlProkkaLPEOICLM_27 (original name was: gnl|Prokka|LPEOICLM_27); gnlProkkaLPEOICLM_29 (original name was: gnl|Prokka|LPEOICLM_29); gnlProkkaLPEOICLM_30 (original name was: gnl|Prokka|LPEOICLM_30); gnlProkkaLPEOICLM_31 (original name was: gnl|Prokka|LPEOICLM_31); gnlProkkaLPEOICLM_33 (original name was: gnl|Prokka|LPEOICLM_33); gnlProkkaLPEOICLM_34 (original name was: gnl|Prokka|LPEOICLM_34)

Compact view

gnlProkkaLPEOICLM_32 - Region 1 - ranthipeptide

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Location: 17,801 - 39,572 nt. (total: 21,772 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

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