GCA_003472965.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNLJEAMBP_3 (original name was: gnl|Prokka|NLJEAMBP_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	arylpolyene	94,938	142,543	flexirubin	Other	48%

gnlProkkaNLJEAMBP_19 (original name was: gnl|Prokka|NLJEAMBP_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RRE-containing	67,578	78,003

No secondary metabolite regions were found in these records:: gnlProkkaNLJEAMBP_1 (original name was: gnl|Prokka|NLJEAMBP_1); gnlProkkaNLJEAMBP_2 (original name was: gnl|Prokka|NLJEAMBP_2); gnlProkkaNLJEAMBP_4 (original name was: gnl|Prokka|NLJEAMBP_4); gnlProkkaNLJEAMBP_5 (original name was: gnl|Prokka|NLJEAMBP_5); gnlProkkaNLJEAMBP_6 (original name was: gnl|Prokka|NLJEAMBP_6); gnlProkkaNLJEAMBP_7 (original name was: gnl|Prokka|NLJEAMBP_7); gnlProkkaNLJEAMBP_8 (original name was: gnl|Prokka|NLJEAMBP_8); gnlProkkaNLJEAMBP_9 (original name was: gnl|Prokka|NLJEAMBP_9); gnlProkkaNLJEAMBP_10 (original name was: gnl|Prokka|NLJEAMBP_10); gnlProkkaNLJEAMBP_11 (original name was: gnl|Prokka|NLJEAMBP_11); gnlProkkaNLJEAMBP_12 (original name was: gnl|Prokka|NLJEAMBP_12); gnlProkkaNLJEAMBP_13 (original name was: gnl|Prokka|NLJEAMBP_13); gnlProkkaNLJEAMBP_14 (original name was: gnl|Prokka|NLJEAMBP_14); gnlProkkaNLJEAMBP_15 (original name was: gnl|Prokka|NLJEAMBP_15); gnlProkkaNLJEAMBP_16 (original name was: gnl|Prokka|NLJEAMBP_16); gnlProkkaNLJEAMBP_17 (original name was: gnl|Prokka|NLJEAMBP_17); gnlProkkaNLJEAMBP_18 (original name was: gnl|Prokka|NLJEAMBP_18); gnlProkkaNLJEAMBP_20 (original name was: gnl|Prokka|NLJEAMBP_20); gnlProkkaNLJEAMBP_21 (original name was: gnl|Prokka|NLJEAMBP_21); gnlProkkaNLJEAMBP_22 (original name was: gnl|Prokka|NLJEAMBP_22); gnlProkkaNLJEAMBP_23 (original name was: gnl|Prokka|NLJEAMBP_23); gnlProkkaNLJEAMBP_24 (original name was: gnl|Prokka|NLJEAMBP_24); gnlProkkaNLJEAMBP_25 (original name was: gnl|Prokka|NLJEAMBP_25); gnlProkkaNLJEAMBP_26 (original name was: gnl|Prokka|NLJEAMBP_26); gnlProkkaNLJEAMBP_27 (original name was: gnl|Prokka|NLJEAMBP_27); gnlProkkaNLJEAMBP_28 (original name was: gnl|Prokka|NLJEAMBP_28); gnlProkkaNLJEAMBP_29 (original name was: gnl|Prokka|NLJEAMBP_29); gnlProkkaNLJEAMBP_30 (original name was: gnl|Prokka|NLJEAMBP_30); gnlProkkaNLJEAMBP_31 (original name was: gnl|Prokka|NLJEAMBP_31); gnlProkkaNLJEAMBP_32 (original name was: gnl|Prokka|NLJEAMBP_32); gnlProkkaNLJEAMBP_33 (original name was: gnl|Prokka|NLJEAMBP_33); gnlProkkaNLJEAMBP_34 (original name was: gnl|Prokka|NLJEAMBP_34); gnlProkkaNLJEAMBP_35 (original name was: gnl|Prokka|NLJEAMBP_35); gnlProkkaNLJEAMBP_36 (original name was: gnl|Prokka|NLJEAMBP_36); gnlProkkaNLJEAMBP_37 (original name was: gnl|Prokka|NLJEAMBP_37); gnlProkkaNLJEAMBP_38 (original name was: gnl|Prokka|NLJEAMBP_38); gnlProkkaNLJEAMBP_39 (original name was: gnl|Prokka|NLJEAMBP_39); gnlProkkaNLJEAMBP_40 (original name was: gnl|Prokka|NLJEAMBP_40); gnlProkkaNLJEAMBP_41 (original name was: gnl|Prokka|NLJEAMBP_41); gnlProkkaNLJEAMBP_42 (original name was: gnl|Prokka|NLJEAMBP_42); gnlProkkaNLJEAMBP_43 (original name was: gnl|Prokka|NLJEAMBP_43); gnlProkkaNLJEAMBP_44 (original name was: gnl|Prokka|NLJEAMBP_44); gnlProkkaNLJEAMBP_45 (original name was: gnl|Prokka|NLJEAMBP_45); gnlProkkaNLJEAMBP_46 (original name was: gnl|Prokka|NLJEAMBP_46); gnlProkkaNLJEAMBP_47 (original name was: gnl|Prokka|NLJEAMBP_47); gnlProkkaNLJEAMBP_48 (original name was: gnl|Prokka|NLJEAMBP_48); gnlProkkaNLJEAMBP_49 (original name was: gnl|Prokka|NLJEAMBP_49); gnlProkkaNLJEAMBP_50 (original name was: gnl|Prokka|NLJEAMBP_50); gnlProkkaNLJEAMBP_51 (original name was: gnl|Prokka|NLJEAMBP_51); gnlProkkaNLJEAMBP_52 (original name was: gnl|Prokka|NLJEAMBP_52); gnlProkkaNLJEAMBP_53 (original name was: gnl|Prokka|NLJEAMBP_53); gnlProkkaNLJEAMBP_54 (original name was: gnl|Prokka|NLJEAMBP_54); gnlProkkaNLJEAMBP_55 (original name was: gnl|Prokka|NLJEAMBP_55); gnlProkkaNLJEAMBP_56 (original name was: gnl|Prokka|NLJEAMBP_56); gnlProkkaNLJEAMBP_57 (original name was: gnl|Prokka|NLJEAMBP_57); gnlProkkaNLJEAMBP_58 (original name was: gnl|Prokka|NLJEAMBP_58); gnlProkkaNLJEAMBP_59 (original name was: gnl|Prokka|NLJEAMBP_59); gnlProkkaNLJEAMBP_60 (original name was: gnl|Prokka|NLJEAMBP_60); gnlProkkaNLJEAMBP_61 (original name was: gnl|Prokka|NLJEAMBP_61); gnlProkkaNLJEAMBP_62 (original name was: gnl|Prokka|NLJEAMBP_62); gnlProkkaNLJEAMBP_63 (original name was: gnl|Prokka|NLJEAMBP_63); gnlProkkaNLJEAMBP_64 (original name was: gnl|Prokka|NLJEAMBP_64); gnlProkkaNLJEAMBP_65 (original name was: gnl|Prokka|NLJEAMBP_65); gnlProkkaNLJEAMBP_66 (original name was: gnl|Prokka|NLJEAMBP_66); gnlProkkaNLJEAMBP_67 (original name was: gnl|Prokka|NLJEAMBP_67); gnlProkkaNLJEAMBP_68 (original name was: gnl|Prokka|NLJEAMBP_68); gnlProkkaNLJEAMBP_69 (original name was: gnl|Prokka|NLJEAMBP_69); gnlProkkaNLJEAMBP_70 (original name was: gnl|Prokka|NLJEAMBP_70); gnlProkkaNLJEAMBP_71 (original name was: gnl|Prokka|NLJEAMBP_71); gnlProkkaNLJEAMBP_72 (original name was: gnl|Prokka|NLJEAMBP_72); gnlProkkaNLJEAMBP_73 (original name was: gnl|Prokka|NLJEAMBP_73); gnlProkkaNLJEAMBP_78 (original name was: gnl|Prokka|NLJEAMBP_78); gnlProkkaNLJEAMBP_87 (original name was: gnl|Prokka|NLJEAMBP_87)

Compact view

gnlProkkaNLJEAMBP_3 - Region 1 - arylpolyene

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Location: 94,938 - 142,543 nt. (total: 47,606 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg3_83

AMP-binding (46..308): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaNLJEAMBP_19 - Region 1 - RRE-containing

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Location: 67,578 - 78,003 nt. (total: 10,426 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.