GCA_003531795.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJPJGAGMO_5 (original name was: gnl|Prokka|JPJGAGMO_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RRE-containing	26,453	44,074

gnlProkkaJPJGAGMO_7 (original name was: gnl|Prokka|JPJGAGMO_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RRE-containing	73,474	93,827

Region	Type	From	To	Most similar known cluster	Similarity
Region 5.1	RRE-containing	26,453	44,074
Region 7.1	RRE-containing	73,474	93,827

No secondary metabolite regions were found in these records:: gnlProkkaJPJGAGMO_1 (original name was: gnl|Prokka|JPJGAGMO_1); gnlProkkaJPJGAGMO_2 (original name was: gnl|Prokka|JPJGAGMO_2); gnlProkkaJPJGAGMO_3 (original name was: gnl|Prokka|JPJGAGMO_3); gnlProkkaJPJGAGMO_4 (original name was: gnl|Prokka|JPJGAGMO_4); gnlProkkaJPJGAGMO_6 (original name was: gnl|Prokka|JPJGAGMO_6); gnlProkkaJPJGAGMO_8 (original name was: gnl|Prokka|JPJGAGMO_8); gnlProkkaJPJGAGMO_9 (original name was: gnl|Prokka|JPJGAGMO_9); gnlProkkaJPJGAGMO_10 (original name was: gnl|Prokka|JPJGAGMO_10); gnlProkkaJPJGAGMO_11 (original name was: gnl|Prokka|JPJGAGMO_11); gnlProkkaJPJGAGMO_12 (original name was: gnl|Prokka|JPJGAGMO_12); gnlProkkaJPJGAGMO_13 (original name was: gnl|Prokka|JPJGAGMO_13); gnlProkkaJPJGAGMO_14 (original name was: gnl|Prokka|JPJGAGMO_14); gnlProkkaJPJGAGMO_15 (original name was: gnl|Prokka|JPJGAGMO_15); gnlProkkaJPJGAGMO_16 (original name was: gnl|Prokka|JPJGAGMO_16); gnlProkkaJPJGAGMO_17 (original name was: gnl|Prokka|JPJGAGMO_17); gnlProkkaJPJGAGMO_18 (original name was: gnl|Prokka|JPJGAGMO_18); gnlProkkaJPJGAGMO_19 (original name was: gnl|Prokka|JPJGAGMO_19); gnlProkkaJPJGAGMO_20 (original name was: gnl|Prokka|JPJGAGMO_20); gnlProkkaJPJGAGMO_21 (original name was: gnl|Prokka|JPJGAGMO_21); gnlProkkaJPJGAGMO_22 (original name was: gnl|Prokka|JPJGAGMO_22); gnlProkkaJPJGAGMO_23 (original name was: gnl|Prokka|JPJGAGMO_23); gnlProkkaJPJGAGMO_24 (original name was: gnl|Prokka|JPJGAGMO_24); gnlProkkaJPJGAGMO_25 (original name was: gnl|Prokka|JPJGAGMO_25); gnlProkkaJPJGAGMO_26 (original name was: gnl|Prokka|JPJGAGMO_26); gnlProkkaJPJGAGMO_27 (original name was: gnl|Prokka|JPJGAGMO_27); gnlProkkaJPJGAGMO_28 (original name was: gnl|Prokka|JPJGAGMO_28); gnlProkkaJPJGAGMO_29 (original name was: gnl|Prokka|JPJGAGMO_29); gnlProkkaJPJGAGMO_30 (original name was: gnl|Prokka|JPJGAGMO_30); gnlProkkaJPJGAGMO_31 (original name was: gnl|Prokka|JPJGAGMO_31); gnlProkkaJPJGAGMO_32 (original name was: gnl|Prokka|JPJGAGMO_32); gnlProkkaJPJGAGMO_33 (original name was: gnl|Prokka|JPJGAGMO_33); gnlProkkaJPJGAGMO_34 (original name was: gnl|Prokka|JPJGAGMO_34); gnlProkkaJPJGAGMO_35 (original name was: gnl|Prokka|JPJGAGMO_35); gnlProkkaJPJGAGMO_36 (original name was: gnl|Prokka|JPJGAGMO_36); gnlProkkaJPJGAGMO_37 (original name was: gnl|Prokka|JPJGAGMO_37); gnlProkkaJPJGAGMO_38 (original name was: gnl|Prokka|JPJGAGMO_38); gnlProkkaJPJGAGMO_39 (original name was: gnl|Prokka|JPJGAGMO_39); gnlProkkaJPJGAGMO_40 (original name was: gnl|Prokka|JPJGAGMO_40); gnlProkkaJPJGAGMO_41 (original name was: gnl|Prokka|JPJGAGMO_41); gnlProkkaJPJGAGMO_42 (original name was: gnl|Prokka|JPJGAGMO_42); gnlProkkaJPJGAGMO_43 (original name was: gnl|Prokka|JPJGAGMO_43); gnlProkkaJPJGAGMO_44 (original name was: gnl|Prokka|JPJGAGMO_44); gnlProkkaJPJGAGMO_45 (original name was: gnl|Prokka|JPJGAGMO_45); gnlProkkaJPJGAGMO_46 (original name was: gnl|Prokka|JPJGAGMO_46); gnlProkkaJPJGAGMO_47 (original name was: gnl|Prokka|JPJGAGMO_47); gnlProkkaJPJGAGMO_48 (original name was: gnl|Prokka|JPJGAGMO_48); gnlProkkaJPJGAGMO_49 (original name was: gnl|Prokka|JPJGAGMO_49); gnlProkkaJPJGAGMO_50 (original name was: gnl|Prokka|JPJGAGMO_50); gnlProkkaJPJGAGMO_51 (original name was: gnl|Prokka|JPJGAGMO_51); gnlProkkaJPJGAGMO_52 (original name was: gnl|Prokka|JPJGAGMO_52); gnlProkkaJPJGAGMO_53 (original name was: gnl|Prokka|JPJGAGMO_53); gnlProkkaJPJGAGMO_54 (original name was: gnl|Prokka|JPJGAGMO_54); gnlProkkaJPJGAGMO_55 (original name was: gnl|Prokka|JPJGAGMO_55); gnlProkkaJPJGAGMO_56 (original name was: gnl|Prokka|JPJGAGMO_56); gnlProkkaJPJGAGMO_57 (original name was: gnl|Prokka|JPJGAGMO_57); gnlProkkaJPJGAGMO_58 (original name was: gnl|Prokka|JPJGAGMO_58); gnlProkkaJPJGAGMO_59 (original name was: gnl|Prokka|JPJGAGMO_59); gnlProkkaJPJGAGMO_60 (original name was: gnl|Prokka|JPJGAGMO_60)

Compact view

gnlProkkaJPJGAGMO_5 - Region 1 - RRE-containing

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Location: 26,453 - 44,074 nt. (total: 17,622 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJPJGAGMO_7 - Region 1 - RRE-containing

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Location: 73,474 - 93,827 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.