Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_003712385.1	Lacticaseibacillus paracasei	FAM18119	SAMN04088865	2003	Switzerland	-	0	0	0	2	2.00
2	GCA_003346265.1	Lacticaseibacillus paracasei	KMB_616	SAMN09398948	2008	Slovakia	-	375	0	0	2	2.00
3	GCA_000309725.1	Lacticaseibacillus paracasei	UW1	SAMN02472003	-	USA: Wisconsin	-	460	0	0	2	2.00
4	GCA_003712865.1	Lacticaseibacillus paracasei	FAM18157	SAMN04088874	2003	Switzerland	-	462	0	0	2	2.00
5	GCA_016887805.1	Lacticaseibacillus paracasei	4186	SAMN17562095	2014-04-17	Italy	-	463	0	0	2	2.00
6	GCA_003712395.1	Lacticaseibacillus paracasei	FAM18113	SAMN04088864	2003	Switzerland	-	464	0	0	2	2.00
7	GCA_003712685.1	Lacticaseibacillus paracasei	FAM22278	SAMN04088883	-	Switzerland	-	478	0	0	2	2.00
8	GCA_009834405.1	Lacticaseibacillus paracasei	TD 062	SAMN12792675	2015-09-29	China:Tibeta	-	479	0	1	1	1.41
9	GCA_003712875.1	Lacticaseibacillus paracasei	FAM6165	SAMN04088892	-	Switzerland	-	482	0	0	2	2.00
10	GCA_041167765.1	Lacticaseibacillus paracasei	CHEE96	SAMN43028853	2024-07-12	South Korea	-	484	0	0	1	1.00
11	GCA_004368425.1	Lacticaseibacillus paracasei	INF 448	SAMN03290696	2000	Norway	-	485	0	0	2	2.00
12	GCA_003712745.1	Lacticaseibacillus paracasei	FAM6012	SAMN04088890	-	Switzerland	-	488	0	0	2	2.00
13	GCA_003346015.1	Lacticaseibacillus paracasei	KMB_623	SAMN09398955	2008	Slovakia	-	490	0	0	2	2.00
14	GCA_003712455.1	Lacticaseibacillus paracasei	FAM18132	SAMN04088871	2003	Switzerland	-	493	0	0	2	2.00
15	GCA_004368495.1	Lacticaseibacillus paracasei	INF 456	SAMN03290701	2000	Norway	-	495	0	0	2	2.00
16	GCA_004368475.1	Lacticaseibacillus paracasei	INF 10	SAMN03290702	2000	Norway	-	496	0	0	2	2.00
17	GCA_003712275.1	Lacticaseibacillus paracasei	FAM18105	SAMN04088861	2003	Switzerland	-	497	0	0	2	2.00
18	GCA_003712355.1	Lacticaseibacillus paracasei	FAM18101	SAMN04088860	2003	Switzerland	-	497	0	0	2	2.00
19	GCA_001191565.1	Lacticaseibacillus paracasei	CAUH35	SAMN03892742	2008-08	China: Xinjiang Uighur Autonomous Region	-	498	0	0	1	1.00
20	GCA_023470655.1	Lacticaseibacillus paracasei	MA3	SAMN27413142	2019-12-08	South Africa: Durban	-	499	0	0	2	2.00
21	GCA_025190775.1	Lacticaseibacillus paracasei	CIRM-BIA 1440	SAMN10365437	1980	France	-	499	0	0	2	2.00
22	GCA_018966985.1	Lacticaseibacillus paracasei	MA2	SAMN19670536	2019-12-08	South Africa: Durban	-	501	0	0	2	2.00
23	GCA_003712345.1	Lacticaseibacillus paracasei	FAM18121	SAMN04088866	2003	Switzerland	-	506	0	0	2	2.00
24	GCA_002442835.1	Lacticaseibacillus paracasei	FAM18149	SAMN05781319	-	Switzerland	-	507	0	0	1	1.00
25	GCA_003712485.1	Lacticaseibacillus paracasei	FAM18149	SAMN04088873	2003	Switzerland	-	507	0	0	2	2.00
26	GCA_003712505.1	Lacticaseibacillus paracasei	FAM18168	SAMN04088875	2003	Switzerland	-	507	0	0	2	2.00
27	GCA_014155825.1	Lacticaseibacillus paracasei	DPC 7150	SAMN12280511	2016-01-01	Ireland: Fermoy	-	507	0	0	2	2.00
28	GCA_018967025.1	Lacticaseibacillus paracasei	ABK	SAMN19670535	2019-12-20	Russia: Moscow	-	507	0	0	2	2.00
29	GCA_023470645.1	Lacticaseibacillus paracasei	KF1	SAMN27413141	2019-12-20	Russia: Moscow	-	507	0	0	2	2.00
30	GCA_039631265.1	Lacticaseibacillus paracasei	B14	SAMN41249971	2023-04-25	Slovakia	-	507	0	0	2	2.00
31	GCA_003712525.1	Lacticaseibacillus paracasei	FAM18133	SAMN04088872	2003	Switzerland	-	508	0	0	2	2.00
32	GCA_028878235.1	Lacticaseibacillus paracasei	M268	SAMN23708198	2012-01-30	Italy	-	508	0	0	2	2.00
33	GCA_000410155.1	Lacticaseibacillus paracasei subsp. paracasei Lpp22	Lpp22	SAMN02469708	1987	-	-	513	0	0	2	2.00
34	GCA_030361135.1	Lacticaseibacillus paracasei	TOM.264	SAMN35776884	2022-04	Russia: North Ossetia	-	529	0	0	2	2.00
35	GCA_030361345.1	Lacticaseibacillus paracasei	TOM.88	SAMN35776877	2022-04	Russia: Dagestan	-	530	0	0	2	2.00
36	GCA_003712725.1	Lacticaseibacillus paracasei	FAM22280	SAMN04088885	-	Switzerland	-	533	0	0	2	2.00
37	GCA_000410395.1	Lacticaseibacillus paracasei subsp. paracasei Lpp41	Lpp41	SAMN02469724	1995	-	-	547	0	0	2	2.00
38	GCA_000582665.1	Lacticaseibacillus paracasei N1115	N1115	SAMN03081525	-	China: Inner Mongolia	-	552	0	1	1	1.41
39	GCA_039566245.1	Lacticaseibacillus paracasei	Z11	SAMN41162775	2022-10-11	Slovakia	-	562	0	0	2	2.00
40	GCA_039566565.1	Lacticaseibacillus paracasei	G185	SAMN41162749	2007	Slovakia	-	563	0	0	2	2.00
41	GCA_039566655.1	Lacticaseibacillus paracasei	G183	SAMN41162748	2007	Slovakia	-	563	0	0	2	2.00
42	GCA_003712925.1	Lacticaseibacillus paracasei	FAM18126	SAMN04088869	2003	Switzerland	-	570	0	0	2	2.00
43	GCA_034555135.1	Lacticaseibacillus paracasei	BF3	SAMN38857134	2021	Spain:Galicia	Brachionus plicatilis	584	0	0	2	2.00
44	GCA_000410255.1	Lacticaseibacillus paracasei subsp. paracasei Lpp7	Lpp7	SAMN02469713	1982	-	-	586	0	1	3	3.16
45	GCA_000026485.1	Lacticaseibacillus paracasei	BL23	SAMEA2272724	-	-	-	592	0	0	1	1.00
46	GCA_001514415.1	Lacticaseibacillus paracasei	KL1	SAMN04378089	2006-03	China:Jilin	-	592	0	0	1	1.00
47	GCA_965138865.1	Lacticaseibacillus paracasei	CIP109805	SAMEA117660480	-	-	-	592	0	0	2	2.00
48	GCA_023656965.1	Lacticaseibacillus paracasei	ATCC 27092	SAMN11309554	1970	Japan: Kanzaki	Homo sapiens	593	0	0	2	2.00
49	GCA_000410035.1	Lacticaseibacillus paracasei subsp. paracasei Lpp49	Lpp49	SAMN02469726	1996	-	-	594	0	0	2	2.00
50	GCA_002849575.1	Lacticaseibacillus paracasei	DUP 13076	SAMN08239980	2013	USA	-	594	0	0	2	2.00
51	GCA_003712425.1	Lacticaseibacillus paracasei	FAM18124	SAMN04088868	2003	Switzerland	-	594	0	0	2	2.00
52	GCA_003712445.1	Lacticaseibacillus paracasei	FAM18129	SAMN04088870	2003	Switzerland	-	594	0	0	2	2.00
53	GCA_030061895.1	Lacticaseibacillus paracasei	GM-080	SAMN27485237	2019-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	594	0	0	1	1.00
54	GCA_016887835.1	Lacticaseibacillus paracasei	2333	SAMN17562094	2011-09-29	Italy	-	595	0	0	2	2.00
55	GCA_000194765.1	Lacticaseibacillus paracasei	BD-II	SAMN02603876	-	China	-	596	0	0	1	1.00
56	GCA_000194785.1	Lacticaseibacillus paracasei	LC2W	SAMN02603877	-	China: Inner Mongolia	-	596	0	0	1	1.00
57	GCA_003545945.1	Lacticaseibacillus paracasei	TJB4	SAMN09604022	2014-09-01	Tajikistan	-	596	0	0	2	2.00
58	GCA_011031945.1	Lacticaseibacillus paracasei	VA02-1AN	SAMN14087235	2015-08	Thailand: Khon Kean	Homo sapiens	596	0	0	2	2.00
59	GCA_024665815.1	Lacticaseibacillus paracasei subsp. paracasei	01	SAMN29862210	-	-	Homo sapiens	596	0	0	1	1.00
60	GCA_025190575.1	Lacticaseibacillus paracasei	CIRM-BIA 770	SAMN10365448	1971	Japan	-	596	0	0	2	2.00
61	GCA_025660485.1	Lacticaseibacillus paracasei	PB5	SAMN31096048	2022-08-25	Canada: Ontario	-	596	0	0	2	2.00
62	GCA_028320445.1	Lacticaseibacillus paracasei	1001095st2_H2_1025SCRN_200924	SAMN31322629	2020-09-24	USA	Homo sapiens	596	0	0	2	2.00
63	GCA_028321445.1	Lacticaseibacillus paracasei	1001095st2_D7_1025SCRN_200924	SAMN31322627	2020-09-24	USA	Homo sapiens	596	0	0	2	2.00
64	GCA_039650495.1	Lacticaseibacillus paracasei	DDS12	SAMN41053268	2023-11-20	India: Tamil Nadu	-	596	0	0	1	1.00
65	GCA_042657205.1	Lacticaseibacillus paracasei	L45	SAMN43851867	-	Thailand: Bangkok	Human (Breastfed infant)	596	0	0	1	1.00
66	GCA_000409955.1	Lacticaseibacillus paracasei subsp. paracasei Lpp223	Lpp223	SAMN02469706	2008	-	Homo sapiens	597	0	0	2	2.00
67	GCA_000410415.1	Lacticaseibacillus paracasei subsp. paracasei Lpp37	Lpp37	SAMN02469718	1994	-	Homo sapiens	597	0	0	2	2.00
68	GCA_003957435.1	Lacticaseibacillus paracasei subsp. tolerans	AO356	SAMN08200884	2016-10-13	South Korea: Seoul	-	597	0	0	1	1.00
69	GCA_007292115.1	Lacticaseibacillus paracasei	CBA3611	SAMN11890849	2018-11	South Korea: Gwangju	Homo sapiens	597	0	0	1	1.00
70	GCA_022478075.1	Lacticaseibacillus paracasei	VHProbi F22	SAMN23765140	2019-11-18	China:Inner Mongolia Autonomous Region	-	597	0	0	1	1.00
71	GCA_022614635.1	Lacticaseibacillus paracasei	GMNL-855	SAMN22548462	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	597	0	0	1	1.00
72	GCA_024999945.1	Lacticaseibacillus paracasei	88	SAMN10365669	2003	-	-	597	0	0	2	2.00
73	GCA_025190635.1	Lacticaseibacillus paracasei	CIRM-BIA 1444	SAMN10365444	2001	France	-	597	0	0	2	2.00
74	GCA_025190705.1	Lacticaseibacillus paracasei	CIRM-BIA 2130	SAMN10365441	1995	France	-	597	0	0	2	2.00
75	GCA_025631055.1	Lacticaseibacillus paracasei	PB6	SAMN31096049	2022-08-25	Canada: Ontario	-	597	0	0	2	2.00
76	GCA_028878155.1	Lacticaseibacillus paracasei	DIALYac	SAMN23708207	2012-01-30	Italy	-	597	0	0	2	2.00
77	GCA_032290425.1	Lacticaseibacillus paracasei	ASM82903v1	SAMN37553482	2022-10-13	China	Homo sapiens	597	0	0	2	2.00
78	GCA_033447265.1	Lacticaseibacillus paracasei	MCC 0258	SAMN38085101	2012-02	India: Maharashtra	-	597	0	0	2	2.00
79	GCA_041734755.1	Lacticaseibacillus paracasei	YGRT25	SAMN43028910	2024-07-12	South Korea	-	597	0	0	1	1.00
80	GCA_000409855.1	Lacticaseibacillus paracasei subsp. paracasei Lpp122	Lpp122	SAMN02469705	2003	-	-	599	0	0	2	2.00
81	GCA_012241605.1	Lacticaseibacillus paracasei	DTA81	SAMN14517101	2016-10-22	Brazil	Homo sapiens	599	0	0	1	1.00
82	GCA_000409895.1	Lacticaseibacillus paracasei subsp. paracasei Lpp226	Lpp226	SAMN02469716	2009	-	-	601	0	0	2	2.00
83	GCA_000409995.1	Lacticaseibacillus paracasei subsp. paracasei Lpp228	Lpp228	SAMN02469720	2008	-	Homo sapiens	601	0	0	2	2.00
84	GCA_003712755.1	Lacticaseibacillus paracasei	FAM3257	SAMN04088888	1990	Switzerland	-	602	0	0	2	2.00
85	GCA_003712825.1	Lacticaseibacillus paracasei	FAM8374	SAMN04088896	-	Switzerland	-	602	0	0	2	2.00
86	GCA_005864195.1	Lacticaseibacillus paracasei	FAM 3257	SAMN11653942	1990	Switzerland	-	602	0	0	2	2.00
87	GCA_000410295.1	Lacticaseibacillus paracasei subsp. paracasei Lpp189	Lpp189	SAMN02469702	2005	-	-	603	0	0	2	2.00
88	GCA_039838605.1	Lacticaseibacillus paracasei	1001095st2_F6_1025SCRN_200924	SAMN31322628	2020-09-24	USA	Homo sapiens	603	0	0	2	2.00
89	GCA_025190485.1	Lacticaseibacillus paracasei	CIRM-BIA 1869	SAMN10365453	2015	France	-	604	0	0	2	2.00
90	GCA_000318035.1	Lacticaseibacillus paracasei	W56	SAMEA2271945	-	-	-	605	0	0	1	1.00
91	GCA_008016825.1	Lacticaseibacillus paracasei	SA5	SAMN11812296	2017	Spain	wild boar	613	0	0	2	2.00
92	GCA_032466015.1	Lacticaseibacillus paracasei	LMG 19719	SAMN37405140	1999	Denmark	-	614	0	0	1	1.00
93	GCA_039566705.1	Lacticaseibacillus paracasei	G187	SAMN41162751	2007	Slovakia	-	617	0	0	2	2.00
94	GCA_028878255.1	Lacticaseibacillus paracasei	I2	SAMN23708201	2012-01-30	Italy	-	618	0	0	2	2.00
95	GCA_039566755.1	Lacticaseibacillus paracasei	Z34	SAMN41162779	2022-10-11	Slovakia	-	618	0	0	2	2.00
96	GCA_000829035.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00010723	-	-	-	620	0	0	1	1.00
97	GCA_001436385.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	DSM 5622	SAMN02369433	1989	-	-	620	0	0	2	2.00
98	GCA_001469115.1	Lacticaseibacillus paracasei	DPC6800	SAMN03840869	2013-02-25	Ireland	-	620	0	0	1	1.00
99	GCA_003177075.1	Lacticaseibacillus paracasei	EG9	SAMN09239981	2012	Japan: Ibaraki	-	620	0	0	1	1.00
100	GCA_004354655.1	Lacticaseibacillus paracasei subsp. paracasei	ATCC 25302	SAMN08555498	2017	Denmark	-	620	0	0	2	2.00