Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_003712535.1	Lacticaseibacillus paracasei	FAM18175	SAMN04088877	2003	Switzerland	-	0	0	0	2	2.00
2	GCA_002027405.1	Lacticaseibacillus paracasei	W16	SAMN06479973	2012-03	China: Nanchang	-	252	0	0	2	2.00
3	GCA_003712325.1	Lacticaseibacillus paracasei	FAM18123	SAMN04088867	2003	Switzerland	-	403	0	0	2	2.00
4	GCA_000409935.1	Lacticaseibacillus paracasei subsp. paracasei Lpp120	Lpp120	SAMN02469723	2003	-	-	415	0	0	2	2.00
5	GCA_035021805.1	Lacticaseibacillus paracasei	SRX10	SAMN38318108	2019	Greece: Attiki	-	422	0	0	2	2.00
6	GCA_030361125.1	Lacticaseibacillus paracasei	TOM.15.25	SAMN35776887	2021-11	Russia: Primorsky Krai	-	423	0	0	2	2.00
7	GCA_003712585.1	Lacticaseibacillus paracasei	FAM18172	SAMN04088876	2003	Switzerland	-	425	0	0	2	2.00
8	GCA_010363715.1	Lacticaseibacillus paracasei	D10-4	SAMN13943411	2018-01-10	USA	Homo sapiens	427	0	0	2	2.00
9	GCA_028321965.1	Lacticaseibacillus paracasei	1001216st1_C7_1001216I_160404	SAMN31322631	2016-04-04	USA	Homo sapiens	427	0	0	2	2.00
10	GCA_028322025.1	Lacticaseibacillus paracasei	1001216st1_H7_1001713B170131_170501	SAMN31322633	2017-05-01	USA	Homo sapiens	427	0	0	2	2.00
11	GCA_028322845.1	Lacticaseibacillus paracasei	1001216st1_D9_D55t1_190419	SAMN31322632	2019-04-19	USA	Homo sapiens	427	0	0	2	2.00
12	GCA_028322955.1	Lacticaseibacillus paracasei	1001216st1_B6_D55t1_190419	SAMN31322630	2019-04-19	USA	Homo sapiens	427	0	0	2	2.00
13	GCA_040093155.1	Lacticaseibacillus paracasei	CLA-AA-H40	SAMN40631522	2019-07-25	Germany:Aachen	Homo sapiens	427	0	0	2	2.00
14	GCA_024125225.1	Lacticaseibacillus paracasei	NB2B-AER-MRS-02	SAMN28102056	2016-04	-	Homo sapiens	428	0	0	1	1.00
15	GCA_003712705.1	Lacticaseibacillus paracasei	FAM22279	SAMN04088884	-	Switzerland	-	432	0	0	2	2.00
16	GCA_039631115.1	Lacticaseibacillus paracasei	L17	SAMN41249976	2023-05-30	Slovakia	-	432	0	0	2	2.00
17	GCA_039631235.1	Lacticaseibacillus paracasei	L18	SAMN41249977	2023-05-30	Slovakia	-	432	0	0	2	2.00
18	GCA_039631055.1	Lacticaseibacillus paracasei	B19	SAMN41249973	2023-04-25	Slovakia	-	440	0	0	2	2.00
19	GCA_039631165.1	Lacticaseibacillus paracasei	B25	SAMN41249975	2023-04-25	Slovakia	-	440	0	0	2	2.00
20	GCA_039631215.1	Lacticaseibacillus paracasei	B20	SAMN41249974	2023-04-25	Slovakia	-	440	0	0	2	2.00
21	GCA_039631065.1	Lacticaseibacillus paracasei	B18	SAMN41249972	2023-04-25	Slovakia	-	442	0	0	2	2.00
22	GCA_039566755.1	Lacticaseibacillus paracasei	Z34	SAMN41162779	2022-10-11	Slovakia	-	450	0	0	2	2.00
23	GCA_003712425.1	Lacticaseibacillus paracasei	FAM18124	SAMN04088868	2003	Switzerland	-	460	0	0	2	2.00
24	GCA_003712445.1	Lacticaseibacillus paracasei	FAM18129	SAMN04088870	2003	Switzerland	-	460	0	0	2	2.00
25	GCA_003177075.1	Lacticaseibacillus paracasei	EG9	SAMN09239981	2012	Japan: Ibaraki	-	463	0	0	1	1.00
26	GCA_016887835.1	Lacticaseibacillus paracasei	2333	SAMN17562094	2011-09-29	Italy	-	464	0	0	2	2.00
27	GCA_003346025.1	Lacticaseibacillus paracasei	KMB_622	SAMN09398954	2008	Slovakia	-	469	0	0	2	2.00
28	GCA_003712265.1	Lacticaseibacillus paracasei	FAM18110	SAMN04088863	2003	Switzerland	-	470	0	0	2	2.00
29	GCA_023375875.1	Lacticaseibacillus paracasei	SP5	SAMN25227086	2018	Greece: Orestiada	-	473	0	0	2	2.00
30	GCA_047946965.1	Lacticaseibacillus paracasei	XM-38	SAMN30660290	2017-06-01	China:Inner Mongolia	-	479	0	0	1	1.00
31	GCA_000309705.1	Lacticaseibacillus paracasei	UCD174	SAMN02472002	-	USA: California	-	480	0	0	2	2.00
32	GCA_001514415.1	Lacticaseibacillus paracasei	KL1	SAMN04378089	2006-03	China:Jilin	-	480	0	0	1	1.00
33	GCA_003712625.1	Lacticaseibacillus paracasei	FAM19404	SAMN04088880	1990	Switzerland	-	502	0	0	2	2.00
34	GCA_000409855.1	Lacticaseibacillus paracasei subsp. paracasei Lpp122	Lpp122	SAMN02469705	2003	-	-	508	0	0	2	2.00
35	GCA_004167215.1	Lacticaseibacillus paracasei	co_0103	SAMN10239551	2015-01	USA: Cambridge	Homo sapiens	509	1	2	2	3.00
36	GCA_009679435.1	Lacticaseibacillus paracasei	BIOML-A3	SAMN11946116	2015-12-09	USA:Boston	Homo sapiens	509	0	0	2	2.00
37	GCA_009679495.1	Lacticaseibacillus paracasei	BIOML-A2	SAMN11946115	2015-12-09	USA:Boston	Homo sapiens	509	1	2	2	3.00
38	GCA_009679505.1	Lacticaseibacillus paracasei	BIOML-A1	SAMN11946114	2015-12-09	USA:Boston	Homo sapiens	509	0	0	2	2.00
39	GCA_019641395.1	Lacticaseibacillus paracasei	LB113R	SAMN20672827	2018	Denmark	-	509	0	0	2	2.00
40	GCA_026967095.1	Lacticaseibacillus paracasei	Lpc_yogurt_C5	SAMN32062184	2021-07-27	USA:Chicago	-	509	0	0	2	2.00
41	GCA_026967175.1	Lacticaseibacillus paracasei	Lpc_yogurt_C3	SAMN32062182	2021-07-27	USA:Chicago	-	509	0	0	3	3.00
42	GCA_026967235.1	Lacticaseibacillus paracasei	Lpc_yogurt_C1	SAMN32062180	2021-07-27	USA:Chicago	-	509	0	0	2	2.00
43	GCA_028322925.1	Lacticaseibacillus paracasei	1001217st1_H10_1001216I_160404	SAMN31322636	2016-04-04	USA	Homo sapiens	509	0	0	2	2.00
44	GCA_009679455.1	Lacticaseibacillus paracasei	BIOML-A4	SAMN11946117	2015-12-09	USA:Boston	Homo sapiens	514	0	0	2	2.00
45	GCA_039838545.1	Lacticaseibacillus paracasei	1001217st1_G4_1001217B_191108	SAMN31322635	2019-11-08	USA	Homo sapiens	516	0	0	2	2.00
46	GCA_002120125.1	Lacticaseibacillus paracasei	HZ-1	SAMN05954276	2012-06	China: Tianjin	-	519	0	0	2	2.00
47	GCA_000014525.1	Lacticaseibacillus paracasei ATCC 334	ATCC 334	SAMN02598528	-	-	-	521	0	0	1	1.00
48	GCA_039838525.1	Lacticaseibacillus paracasei	1001217st1_A4_1001217B_191108	SAMN31322634	2019-11-08	USA	Homo sapiens	522	0	0	2	2.00
49	GCA_028878255.1	Lacticaseibacillus paracasei	I2	SAMN23708201	2012-01-30	Italy	-	528	0	0	2	2.00
50	GCA_032466015.1	Lacticaseibacillus paracasei	LMG 19719	SAMN37405140	1999	Denmark	-	528	0	0	1	1.00
51	GCA_018286435.1	Lacticaseibacillus paracasei subsp. tolerans	2A	SAMN18869149	2014-03-31	USA	-	530	0	0	1	1.00
52	GCA_039566645.1	Lacticaseibacillus paracasei	A191	SAMN41162755	2007	Slovakia	-	530	0	0	2	2.00
53	GCA_025211235.1	Lacticaseibacillus paracasei	1017	SAMN10365678	2014	Ethiopia	-	535	0	0	2	2.00
54	GCA_001436385.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	DSM 5622	SAMN02369433	1989	-	-	536	0	0	2	2.00
55	GCA_007989125.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00166241	-	-	-	536	0	0	2	2.00
56	GCA_015693945.1	Lacticaseibacillus paracasei subsp. tolerans	ZY-1	SAMN16861159	2017-06	China	-	536	0	0	1	1.00
57	GCA_039566245.1	Lacticaseibacillus paracasei	Z11	SAMN41162775	2022-10-11	Slovakia	-	536	0	0	2	2.00
58	GCA_000159495.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	ATCC 25302	SAMN00001470	-	-	Homo sapiens	537	0	0	2	2.00
59	GCA_000829035.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00010723	-	-	-	537	0	0	1	1.00
60	GCA_003712925.1	Lacticaseibacillus paracasei	FAM18126	SAMN04088869	2003	Switzerland	-	537	0	0	2	2.00
61	GCA_004354655.1	Lacticaseibacillus paracasei subsp. paracasei	ATCC 25302	SAMN08555498	2017	Denmark	-	537	0	0	2	2.00
62	GCA_013867595.1	Lacticaseibacillus paracasei	s-16	SAMN15579850	2020-07-20	-	-	537	0	0	2	2.00
63	GCA_039566565.1	Lacticaseibacillus paracasei	G185	SAMN41162749	2007	Slovakia	-	537	0	0	2	2.00
64	GCA_039566655.1	Lacticaseibacillus paracasei	G183	SAMN41162748	2007	Slovakia	-	537	0	0	2	2.00
65	GCA_000582665.1	Lacticaseibacillus paracasei N1115	N1115	SAMN03081525	-	China: Inner Mongolia	-	540	0	1	1	1.41
66	GCA_039838565.1	Lacticaseibacillus paracasei	1001217st1_H5_1001217B_191108	SAMN31322637	2019-11-08	USA	Homo sapiens	543	0	0	2	2.00
67	GCA_003712835.1	Lacticaseibacillus paracasei	FAM8407	SAMN04088897	-	Switzerland	-	549	0	0	2	2.00
68	GCA_040267725.1	Lacticaseibacillus paracasei	TCI727	SAMN41829189	2020-05-01	Taiwan:Taipei	-	551	0	0	1	1.00
69	GCA_000410375.1	Lacticaseibacillus paracasei subsp. paracasei Lpp71	Lpp71	SAMN02469712	1999	-	-	559	0	0	1	1.00
70	GCA_000410315.1	Lacticaseibacillus paracasei subsp. paracasei Lpp14	Lpp14	SAMN02469711	1989	-	-	570	0	0	2	2.00
71	GCA_003712605.1	Lacticaseibacillus paracasei	FAM19353	SAMN04088879	1990	Switzerland	-	572	0	0	2	2.00
72	GCA_020540265.1	Lacticaseibacillus paracasei	MSK.19.8	SAMN22165146	-	USA:New York	Homo sapiens	572	0	0	2	2.00
73	GCA_000410255.1	Lacticaseibacillus paracasei subsp. paracasei Lpp7	Lpp7	SAMN02469713	1982	-	-	573	0	1	3	3.16
74	GCA_003712905.1	Lacticaseibacillus paracasei	FAM3228	SAMN04088886	-	Switzerland	-	573	0	0	1	1.00
75	GCA_039615445.1	Lacticaseibacillus paracasei	NKM 5.4	SAMN41068727	2016-02	Viet Nam: Khanh Hoa	-	573	0	0	2	2.00
76	GCA_030361225.1	Lacticaseibacillus paracasei	TOM.262	SAMN35776883	2022-04	Russia: North Ossetia	-	574	0	0	2	2.00
77	GCA_002027415.1	Lacticaseibacillus paracasei	W14	SAMN06480069	2012-03	China: Nanchang	-	576	0	0	2	2.00
78	GCA_008868525.1	Lacticaseibacillus paracasei	BIO5452	SAMN12856540	-	-	-	578	0	0	2	2.00
79	GCA_025190765.1	Lacticaseibacillus paracasei	CIRM-BIA 1511	SAMN10365436	1987	Spain	-	578	0	0	2	2.00
80	GCA_008369945.1	Lacticaseibacillus paracasei	DTA93	SAMN12661681	2016-10-22	Brazil	Homo sapiens	580	0	0	2	2.00
81	GCA_025190825.1	Lacticaseibacillus paracasei	CIRM-BIA 2105	SAMN10365434	1993	Japan	-	581	0	0	2	2.00
82	GCA_001540885.1	Lacticaseibacillus paracasei	Lc1542	SAMN03702539	2012	France	bovine	584	0	0	2	2.00
83	GCA_002257625.1	Lacticaseibacillus paracasei	TK1501	SAMN05921089	2015	China:Inner Mongolia	-	584	0	0	1	1.00
84	GCA_004141835.1	Lacticaseibacillus paracasei	SRCM103299	SAMN10849469	2018	South Korea	-	588	0	0	1	1.00
85	GCA_002904305.1	Lacticaseibacillus paracasei	CCC B1205	SAMN03813856	-	USA	-	591	0	0	2	2.00
86	GCA_009931715.1	Lacticaseibacillus paracasei	CACC 566	SAMN13871807	2018-10	South Korea:Jeongeup-si	Canine	592	0	0	1	1.00
87	GCA_012955485.1	Lacticaseibacillus paracasei	347-16	SAMN13259076	2016	Russia: Kislovodsk	Homo sapiens	592	0	0	1	1.00
88	GCA_024637915.1	Lacticaseibacillus paracasei	VHProbi F11	SAMN27160580	2021-01-25	China:Qingdao	Homo sapiens	592	0	0	1	1.00
89	GCA_028322945.1	Lacticaseibacillus paracasei	1001295st1_G5_1001295H_181012	SAMN31322639	2018-10-12	USA	Homo sapiens	592	0	0	2	2.00
90	GCA_029906365.1	Lacticaseibacillus paracasei subsp. paracasei	MI3	SAMN34106059	2022-09-01	South Korea	Homo sapiens	592	0	0	1	1.00
91	GCA_037283365.1	Lacticaseibacillus paracasei	NRC_P5	SAMN32629232	2020-03	Egypt:Qalyubia	buffalo	592	0	0	2	2.00
92	GCA_037283435.1	Lacticaseibacillus paracasei	NRC_P6	SAMN32629233	2020-03	Egypt:Giza	buffalo	592	0	0	2	2.00
93	GCA_037283545.1	Lacticaseibacillus paracasei	NRC_P3	SAMN32629230	2020-03	Egypt:Sohag	cow	592	0	0	2	2.00
94	GCA_000409835.1	Lacticaseibacillus paracasei subsp. tolerans Lpl7	Lpl7	SAMN02469714	-	-	-	593	0	0	2	2.00
95	GCA_003712245.1	Lacticaseibacillus paracasei	FAM18108	SAMN04088862	2003	Switzerland	-	593	0	0	2	2.00
96	GCA_028878105.1	Lacticaseibacillus paracasei	TMW 1.300	SAMN23708206	2012-01-30	Italy	-	593	0	0	2	2.00
97	GCA_041117985.1	Lacticaseibacillus paracasei	MYA5	SAMN42930119	2022-10-21	South Korea: Gwangju	-	593	0	0	1	1.00
98	GCA_000410455.1	Lacticaseibacillus paracasei subsp. paracasei Lpp43	Lpp43	SAMN02469725	1995	-	-	594	0	0	2	2.00
99	GCA_015476175.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0747	SAMN16668663	-	South Korea	-	594	0	0	1	1.00
100	GCA_015476195.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0761	SAMN16668817	-	South Korea	-	594	0	0	1	1.00