Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_003712665.1	Lacticaseibacillus paracasei	FAM22277	SAMN04088882	1996	Switzerland	-	0	0	0	2	2.00
2	GCA_009739485.1	Lacticaseibacillus paracasei subsp. paracasei	IBB3423	SAMN07167770	2013-09-29	Poland	-	562	0	0	1	1.00
3	GCA_003712795.1	Lacticaseibacillus paracasei	FAM4067	SAMN04088889	1995	Switzerland	-	564	0	0	2	2.00
4	GCA_024717335.1	Lacticaseibacillus paracasei	VHProbi M56	SAMN27162336	2021-01-25	China:Qingdao	Homo sapiens	565	0	0	1	1.00
5	GCA_040430295.1	Lacticaseibacillus paracasei	ATA-LTC-Lp041103	SAMN41784243	2003-11-04	Turkey: Krkkale, Hacbal	Animal	565	0	0	2	2.00
6	GCA_037966745.1	Lacticaseibacillus paracasei	ATA-LTC-Lp040802	SAMN40643417	2002-08-04	Turkey:Izmir	Homo sapiens	566	0	0	2	2.00
7	GCA_038025045.1	Lacticaseibacillus paracasei	ATA-LTC-Lp121000	SAMN40643419	2000-10-12	Turkey:Igdir	animal	567	0	0	2	2.00
8	GCA_002813615.1	Lacticaseibacillus paracasei subsp. paracasei	TMW 1.1434	SAMN05356834	-	Germany	-	569	0	0	1	1.00
9	GCA_003712225.1	Lacticaseibacillus paracasei	FAM10859	SAMN04088858	-	Switzerland	-	569	0	0	2	2.00
10	GCA_029906315.1	Lacticaseibacillus paracasei subsp. paracasei	MI29	SAMN34105739	2022-09-01	South Korea	Homo sapiens	569	0	0	1	1.00
11	GCA_000309765.1	Lacticaseibacillus paracasei	Lc-10	SAMN02472012	-	-	-	575	0	0	2	2.00
12	GCA_002914885.1	Lacticaseibacillus paracasei	BP07	SAMN07187783	2017	Italy	-	575	0	0	2	2.00
13	GCA_002901165.3	Lacticaseibacillus paracasei subsp. paracasei	NTU 101	SAMN07445234	2013-09-16	Taiwan:Taipei	Homo sapiens	576	0	0	1	1.00
14	GCA_025190495.1	Lacticaseibacillus paracasei	CIRM-BIA 288	SAMN10365452	2008	France	-	576	0	0	2	2.00
15	GCA_000474615.1	Lacticaseibacillus paracasei	5b	SAMN02470054	-	-	-	577	0	0	2	2.00
16	GCA_000410015.1	Lacticaseibacillus paracasei subsp. paracasei Lpp221	Lpp221	SAMN02469717	2008	-	Homo sapiens	579	0	0	2	2.00
17	GCA_000410435.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649	CNCM I-4649	SAMN02469704	2003	-	-	579	0	0	2	2.00
18	GCA_000958485.1	Lacticaseibacillus paracasei NRIC 1981	-	SAMD00000558	-	-	-	579	0	0	2	2.00
19	GCA_003712645.1	Lacticaseibacillus paracasei	FAM22276	SAMN04088881	1990	Switzerland	-	593	0	0	2	2.00
20	GCA_003712935.1	Lacticaseibacillus paracasei	FAM3248	SAMN04088887	1990	Switzerland	-	593	0	0	2	2.00
21	GCA_015476075.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0245	SAMN16657550	-	South Korea	-	594	0	0	1	1.00
22	GCA_031348425.1	Lacticaseibacillus paracasei	KCKM 0245	SAMN37235621	2016-07-08	South Korea	-	594	0	0	1	1.00
23	GCA_003712295.1	Lacticaseibacillus paracasei	FAM18099	SAMN04088859	2003	Switzerland	-	595	0	0	1	1.00
24	GCA_031461095.1	Lacticaseibacillus paracasei	KCKM 0992	SAMN37256209	2015	South Korea	-	595	0	0	1	1.00
25	GCA_022131015.1	Lacticaseibacillus paracasei	CJNU 1877	SAMN21399231	2020-02-25	South Korea	-	606	0	0	2	2.00
26	GCA_018257175.1	Lacticaseibacillus paracasei	Dm-2019-60	SAMN17146146	2019	USA: Ithaca, NY	Drosophila melanogaster	608	0	0	2	2.00
27	GCA_039615445.1	Lacticaseibacillus paracasei	NKM 5.4	SAMN41068727	2016-02	Viet Nam: Khanh Hoa	-	616	0	0	2	2.00
28	GCA_000309605.1	Lacticaseibacillus paracasei	32G	SAMN02472010	-	USA: Wisconsin	-	630	0	0	2	2.00
29	GCA_039871405.1	Lacticaseibacillus paracasei	OSY-31	SAMN41462736	2022	USA	-	633	0	0	2	2.00
30	GCA_036762785.1	Lacticaseibacillus paracasei	1571-2_IL3211	SAMN37904772	-	-	animal	635	0	0	2	2.00
31	GCA_022614605.1	Lacticaseibacillus paracasei	GMNL-653	SAMN22548460	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	636	0	0	1	1.00
32	GCA_036762765.1	Lacticaseibacillus paracasei	1567_IL3212	SAMN37904769	-	-	animal	636	0	0	2	2.00
33	GCA_025190685.1	Lacticaseibacillus paracasei	CIRM-BIA 1445	SAMN10365442	1996	France	-	638	0	0	2	2.00
34	GCA_022588775.1	Lacticaseibacillus paracasei	BCRC-16100	SAMN22548461	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	639	0	0	1	1.00
35	GCA_025190545.1	Lacticaseibacillus paracasei	CIRM-BIA 2129	SAMN10365447	1993	-	-	639	0	0	2	2.00
36	GCA_034555155.1	Lacticaseibacillus paracasei	RT4	SAMN38857191	2021	Spain:Galicia	Brachionus plicatilis	639	0	0	2	2.00
37	GCA_000410175.1	Lacticaseibacillus paracasei subsp. paracasei Lpp225	Lpp225	SAMN02469715	2009	-	-	641	0	0	2	2.00
38	GCA_025137495.1	Lacticaseibacillus paracasei	L1	SAMN20355457	2015-10-10	China:Jinzhou	-	641	0	0	1	1.00
39	GCA_047785155.1	Lacticaseibacillus paracasei	SRCM212209	SAMN46082883	2020-10	South Korea:Sunchang	-	641	0	0	1	1.00
40	GCA_000409815.1	Lacticaseibacillus paracasei subsp. paracasei Lpp230	Lpp230	SAMN02469722	-	-	Homo sapiens	642	0	0	2	2.00
41	GCA_000410135.1	Lacticaseibacillus paracasei subsp. paracasei Lpp17	Lpp17	SAMN02469707	1987	-	-	642	0	0	2	2.00
42	GCA_003199005.1	Lacticaseibacillus paracasei	Lpc10	SAMN09283999	2014	Argentina: Provincia de Rio Negro	-	642	0	0	1	1.00
43	GCA_024329455.1	Lacticaseibacillus paracasei	Kef-w14	SAMN18720967	2020-10-16	Singapore	-	642	0	0	2	2.00
44	GCA_025946725.1	Lacticaseibacillus paracasei subsp. tolerans	FX-6	SAMN31308951	2014-10-03	China: Guangzhou	-	642	0	0	1	1.00
45	GCA_025946745.1	Lacticaseibacillus paracasei subsp. tolerans	FX-6-1	SAMN31308977	2014-10-15	China: Guangzhou	-	642	0	0	1	1.00
46	GCA_028878315.1	Lacticaseibacillus paracasei	DSM 4905	SAMN23708196	2012-01-30	Italy	Homo sapiens	642	0	0	2	2.00
47	GCA_030215365.1	Lacticaseibacillus paracasei	UMB7433B	SAMN34998777	-	USA: Maywood, IL	Homo sapiens	642	0	0	2	2.00
48	GCA_040459635.1	Lacticaseibacillus paracasei	T0602	SAMN31372287	2020-11-17	Thailand	-	642	0	0	2	2.00
49	GCA_040459685.1	Lacticaseibacillus paracasei	T0601	SAMN31372286	2020-11-17	Thailand	-	642	0	0	2	2.00
50	GCA_044740695.1	Lacticaseibacillus paracasei	E11.5	SAMN44487087	-	Ethiopia	-	642	0	0	1	1.00
51	GCA_000155515.2	Lacticaseibacillus paracasei subsp. paracasei 8700:2	362.5013889	SAMN02463682	-	-	Homo sapiens	644	0	0	1	1.00
52	GCA_002257625.1	Lacticaseibacillus paracasei	TK1501	SAMN05921089	2015	China:Inner Mongolia	-	644	0	0	1	1.00
53	GCA_049163355.1	Lacticaseibacillus paracasei	FD1	SAMN47427496	2019-12	Malaysia: Kelantan	-	644	0	0	1	1.00
54	GCA_000410355.1	Lacticaseibacillus paracasei subsp. paracasei Lpp126	Lpp126	SAMN02469721	2003	-	-	645	0	0	1	1.00
55	GCA_001540885.1	Lacticaseibacillus paracasei	Lc1542	SAMN03702539	2012	France	bovine	647	0	0	2	2.00
56	GCA_015714835.1	Lacticaseibacillus paracasei subsp. paracasei	K114	SAMN12234693	2017-03-10	Ethiopia: Addis Ababa	-	648	0	0	2	2.00
57	GCA_033815995.1	Lacticaseibacillus paracasei	YE01	SAMN37887709	-	China	-	648	0	0	1	1.00
58	GCA_015476155.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0625	SAMN16668564	-	South Korea	-	649	0	0	1	1.00
59	GCA_000019245.3	Lacticaseibacillus paracasei	Zhang	SAMN02603933	-	China: Inner Mongolia	-	650	0	0	1	1.00
60	GCA_015476135.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0734	SAMN16667758	-	South Korea	-	650	0	0	1	1.00
61	GCA_018729425.1	Lacticaseibacillus paracasei	MYD3	SAMN16551136	2017	Indonesia: Yogyakarta	-	650	0	0	2	2.00
62	GCA_022819265.1	Lacticaseibacillus paracasei	SCB0563	SAMN26885627	2013-09-10	China:Guangdong	-	650	0	0	1	1.00
63	GCA_025190525.1	Lacticaseibacillus paracasei	CIRM-BIA 1517	SAMN10365450	2012	France	-	650	0	0	2	2.00
64	GCA_028878355.1	Lacticaseibacillus paracasei	LMG 25883	SAMN23708195	2012-01-30	Italy	-	650	0	0	2	2.00
65	GCA_041734185.1	Lacticaseibacillus paracasei	MGL98	SAMN43028860	2024-07-12	South Korea	-	650	0	0	1	1.00
66	GCA_041893825.1	Lacticaseibacillus paracasei	FMT2	SAMN43472422	2024	South Korea: Daegu	-	650	0	0	1	1.00
67	GCA_021650835.1	Lacticaseibacillus paracasei subsp. paracasei	GR0562	SAMN25145123	2007-12	Taiwan	Homo sapiens	651	0	0	1	1.00
68	GCA_030540905.1	Lacticaseibacillus paracasei	11w	SAMN36403201	2022-01-26	Lithuania: Vilnius	-	651	0	0	2	2.00
69	GCA_031630235.1	Lacticaseibacillus paracasei	69Bis	SAMN30173654	2012-03-01	Algeria: Sidi Okba region, Biskra.	goat	651	0	0	2	2.00
70	GCA_034555135.1	Lacticaseibacillus paracasei	BF3	SAMN38857134	2021	Spain:Galicia	Brachionus plicatilis	651	0	0	2	2.00
71	GCA_002148875.1	Lacticaseibacillus paracasei	DPC2071	SAMN05949321	1988-11-08	Ireland	-	652	0	0	2	2.00
72	GCA_005049135.1	Lacticaseibacillus paracasei	S49	SAMN11456259	2014	Canada:Lethbridge	Bos taurus	652	0	0	2	2.00
73	GCA_018917305.1	Lacticaseibacillus paracasei	N53	SAMN19374054	2019-08	China: Suzhou	Macaca fascicularis	652	0	0	2	2.00
74	GCA_025190725.1	Lacticaseibacillus paracasei	CIRM-BIA 699	SAMN10365439	1972	-	-	652	0	0	2	2.00
75	GCA_026797475.1	Lacticaseibacillus paracasei	CBP-1042	SAMN27675067	-	-	-	652	0	0	2	2.00
76	GCA_028878305.1	Lacticaseibacillus paracasei	NRRL B-456	SAMN23708197	2012-01-30	Italy	-	652	0	0	2	2.00
77	GCA_037283385.1	Lacticaseibacillus paracasei	NRC_P4	SAMN32629231	2020-03	Egypt:Giza	cow	652	0	0	2	2.00
78	GCA_040822445.1	Lacticaseibacillus paracasei subsp. paracasei	BS2-PB5	SAMN42029631	2022-02-20	Indonesia: Tangerang	Homo sapiens	652	0	0	1	1.00
79	GCA_000409875.1	Lacticaseibacillus paracasei subsp. paracasei Lpp46	Lpp46	SAMN02469709	1996	-	-	653	0	0	2	2.00
80	GCA_000418515.1	Lacticaseibacillus paracasei	LOCK919	SAMN02603330	-	-	-	653	0	0	1	1.00
81	GCA_002406665.1	Lacticaseibacillus paracasei	B3	SAMN07665582	2016-11-07	Canada: Montreal, Quebec	-	653	0	0	2	2.00
82	GCA_003712565.1	Lacticaseibacillus paracasei	FAM19317	SAMN04088878	1990	Switzerland	-	653	0	0	2	2.00
83	GCA_003712605.1	Lacticaseibacillus paracasei	FAM19353	SAMN04088879	1990	Switzerland	-	653	0	0	2	2.00
84	GCA_003712755.1	Lacticaseibacillus paracasei	FAM3257	SAMN04088888	1990	Switzerland	-	653	0	0	2	2.00
85	GCA_003712905.1	Lacticaseibacillus paracasei	FAM3228	SAMN04088886	-	Switzerland	-	653	0	0	1	1.00
86	GCA_003712985.1	Lacticaseibacillus paracasei	FAM8140	SAMN04088895	-	Switzerland	-	653	0	0	2	2.00
87	GCA_005864195.1	Lacticaseibacillus paracasei	FAM 3257	SAMN11653942	1990	Switzerland	-	653	0	0	2	2.00
88	GCA_008868525.1	Lacticaseibacillus paracasei	BIO5452	SAMN12856540	-	-	-	653	0	0	2	2.00
89	GCA_014905075.1	Lacticaseibacillus paracasei	NFFJ04	SAMN14444968	2018-11	South Korea: Sangju	-	653	0	0	1	1.00
90	GCA_015693945.1	Lacticaseibacillus paracasei subsp. tolerans	ZY-1	SAMN16861159	2017-06	China	-	653	0	0	1	1.00
91	GCA_020540265.1	Lacticaseibacillus paracasei	MSK.19.8	SAMN22165146	-	USA:New York	Homo sapiens	653	0	0	2	2.00
92	GCA_025190765.1	Lacticaseibacillus paracasei	CIRM-BIA 1511	SAMN10365436	1987	Spain	-	653	0	0	2	2.00
93	GCA_030710015.1	Lacticaseibacillus paracasei	ULE721	SAMN33593465	2018-01-15	Spain:Leon	-	653	0	0	2	2.00
94	GCA_049191405.1	Lacticaseibacillus paracasei	IATA083	SAMN45053962	2022	Spain:Valencia	Homo sapiens	653	0	0	2	2.00
95	GCA_000309785.1	Lacticaseibacillus paracasei	Lpc-37	SAMN02472013	-	-	-	654	0	0	2	2.00
96	GCA_002079285.1	Lacticaseibacillus paracasei	IIA	SAMN04571918	2014-05-05	Indonesia: Bogor	-	654	0	0	1	1.00
97	GCA_002148805.1	Lacticaseibacillus paracasei	DPC4206	SAMN06220137	1995-07	Ireland	-	654	0	0	2	2.00
98	GCA_002148885.1	Lacticaseibacillus paracasei	DPC4536	SAMN06463780	1995-11	Ireland	-	654	0	0	2	2.00
99	GCA_003367655.1	Lacticaseibacillus paracasei subsp. paracasei	KMB_598	SAMN09398938	2013	Slovakia	-	654	0	0	2	2.00
100	GCA_003434205.1	Lacticaseibacillus paracasei	AM33-2AC	SAMN09736452	2013-12-01	China: Shenzhen	Homo sapiens	654	0	0	2	2.00