Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_003712795.1	Lacticaseibacillus paracasei	FAM4067	SAMN04088889	1995	Switzerland	-	0	0	0	2	2.00
2	GCA_009739485.1	Lacticaseibacillus paracasei subsp. paracasei	IBB3423	SAMN07167770	2013-09-29	Poland	-	50	0	0	1	1.00
3	GCA_024717335.1	Lacticaseibacillus paracasei	VHProbi M56	SAMN27162336	2021-01-25	China:Qingdao	Homo sapiens	127	0	0	1	1.00
4	GCA_037966745.1	Lacticaseibacillus paracasei	ATA-LTC-Lp040802	SAMN40643417	2002-08-04	Turkey:Izmir	Homo sapiens	129	0	0	2	2.00
5	GCA_038025045.1	Lacticaseibacillus paracasei	ATA-LTC-Lp121000	SAMN40643419	2000-10-12	Turkey:Igdir	animal	129	0	0	2	2.00
6	GCA_040430295.1	Lacticaseibacillus paracasei	ATA-LTC-Lp041103	SAMN41784243	2003-11-04	Turkey: Krkkale, Hacbal	Animal	136	0	0	2	2.00
7	GCA_003712225.1	Lacticaseibacillus paracasei	FAM10859	SAMN04088858	-	Switzerland	-	140	0	0	2	2.00
8	GCA_000958485.1	Lacticaseibacillus paracasei NRIC 1981	-	SAMD00000558	-	-	-	148	0	0	2	2.00
9	GCA_000474615.1	Lacticaseibacillus paracasei	5b	SAMN02470054	-	-	-	153	0	0	2	2.00
10	GCA_029906315.1	Lacticaseibacillus paracasei subsp. paracasei	MI29	SAMN34105739	2022-09-01	South Korea	Homo sapiens	154	0	0	1	1.00
11	GCA_002813615.1	Lacticaseibacillus paracasei subsp. paracasei	TMW 1.1434	SAMN05356834	-	Germany	-	157	0	0	1	1.00
12	GCA_000309765.1	Lacticaseibacillus paracasei	Lc-10	SAMN02472012	-	-	-	168	0	0	2	2.00
13	GCA_002914885.1	Lacticaseibacillus paracasei	BP07	SAMN07187783	2017	Italy	-	168	0	0	2	2.00
14	GCA_025190495.1	Lacticaseibacillus paracasei	CIRM-BIA 288	SAMN10365452	2008	France	-	170	0	0	2	2.00
15	GCA_002901165.3	Lacticaseibacillus paracasei subsp. paracasei	NTU 101	SAMN07445234	2013-09-16	Taiwan:Taipei	Homo sapiens	251	0	0	1	1.00
16	GCA_003712645.1	Lacticaseibacillus paracasei	FAM22276	SAMN04088881	1990	Switzerland	-	256	0	0	2	2.00
17	GCA_003712935.1	Lacticaseibacillus paracasei	FAM3248	SAMN04088887	1990	Switzerland	-	256	0	0	2	2.00
18	GCA_003712295.1	Lacticaseibacillus paracasei	FAM18099	SAMN04088859	2003	Switzerland	-	462	0	0	1	1.00
19	GCA_002406665.1	Lacticaseibacillus paracasei	B3	SAMN07665582	2016-11-07	Canada: Montreal, Quebec	-	475	0	0	2	2.00
20	GCA_035330705.1	Lacticaseibacillus paracasei	S135-24W	SAMN38650142	2022	Taiwan	Homo sapiens	476	0	0	1	1.00
21	GCA_030540905.1	Lacticaseibacillus paracasei	11w	SAMN36403201	2022-01-26	Lithuania: Vilnius	-	504	0	0	2	2.00
22	GCA_003712835.1	Lacticaseibacillus paracasei	FAM8407	SAMN04088897	-	Switzerland	-	522	0	0	2	2.00
23	GCA_003712245.1	Lacticaseibacillus paracasei	FAM18108	SAMN04088862	2003	Switzerland	-	539	0	0	2	2.00
24	GCA_003712665.1	Lacticaseibacillus paracasei	FAM22277	SAMN04088882	1996	Switzerland	-	564	0	0	2	2.00
25	GCA_034044075.1	Lacticaseibacillus paracasei	MP11A	SAMN37950489	2019-08-19	India: Manipur	-	570	0	0	1	1.00
26	GCA_018917305.1	Lacticaseibacillus paracasei	N53	SAMN19374054	2019-08	China: Suzhou	Macaca fascicularis	587	0	0	2	2.00
27	GCA_003367655.1	Lacticaseibacillus paracasei subsp. paracasei	KMB_598	SAMN09398938	2013	Slovakia	-	593	0	0	2	2.00
28	GCA_039615415.1	Lacticaseibacillus paracasei	TBM 27	SAMN41068605	2015-10	Viet Nam: Bac Giang	-	595	0	0	2	2.00
29	GCA_000410075.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648	CNCM I-4648	SAMN03177793	1988	-	-	600	0	0	2	2.00
30	GCA_031630235.1	Lacticaseibacillus paracasei	69Bis	SAMN30173654	2012-03-01	Algeria: Sidi Okba region, Biskra.	goat	603	0	0	2	2.00
31	GCA_028993835.1	Lacticaseibacillus paracasei	ARN1	SAMN33449985	2021-08-01	Turkey:Ankara	bacteria	610	0	0	2	2.00
32	GCA_036762785.1	Lacticaseibacillus paracasei	1571-2_IL3211	SAMN37904772	-	-	animal	620	0	0	2	2.00
33	GCA_036762765.1	Lacticaseibacillus paracasei	1567_IL3212	SAMN37904769	-	-	animal	621	0	0	2	2.00
34	GCA_005049135.1	Lacticaseibacillus paracasei	S49	SAMN11456259	2014	Canada:Lethbridge	Bos taurus	624	0	0	2	2.00
35	GCA_028878355.1	Lacticaseibacillus paracasei	LMG 25883	SAMN23708195	2012-01-30	Italy	-	624	0	0	2	2.00
36	GCA_000019245.3	Lacticaseibacillus paracasei	Zhang	SAMN02603933	-	China: Inner Mongolia	-	625	0	0	1	1.00
37	GCA_022819265.1	Lacticaseibacillus paracasei	SCB0563	SAMN26885627	2013-09-10	China:Guangdong	-	625	0	0	1	1.00
38	GCA_025190685.1	Lacticaseibacillus paracasei	CIRM-BIA 1445	SAMN10365442	1996	France	-	627	0	0	2	2.00
39	GCA_028878315.1	Lacticaseibacillus paracasei	DSM 4905	SAMN23708196	2012-01-30	Italy	Homo sapiens	627	0	0	2	2.00
40	GCA_000410175.1	Lacticaseibacillus paracasei subsp. paracasei Lpp225	Lpp225	SAMN02469715	2009	-	-	629	0	0	2	2.00
41	GCA_018257175.1	Lacticaseibacillus paracasei	Dm-2019-60	SAMN17146146	2019	USA: Ithaca, NY	Drosophila melanogaster	629	0	0	2	2.00
42	GCA_044740695.1	Lacticaseibacillus paracasei	E11.5	SAMN44487087	-	Ethiopia	-	629	0	0	1	1.00
43	GCA_025137495.1	Lacticaseibacillus paracasei	L1	SAMN20355457	2015-10-10	China:Jinzhou	-	630	0	0	1	1.00
44	GCA_047785155.1	Lacticaseibacillus paracasei	SRCM212209	SAMN46082883	2020-10	South Korea:Sunchang	-	630	0	0	1	1.00
45	GCA_033815995.1	Lacticaseibacillus paracasei	YE01	SAMN37887709	-	China	-	632	0	0	1	1.00
46	GCA_003712785.1	Lacticaseibacillus paracasei	FAM6161	SAMN04088891	-	Switzerland	-	633	0	0	2	2.00
47	GCA_018729425.1	Lacticaseibacillus paracasei	MYD3	SAMN16551136	2017	Indonesia: Yogyakarta	-	633	0	0	2	2.00
48	GCA_025252385.1	Lacticaseibacillus paracasei	VHProbi O44	SAMN30550144	2021-05-10	China: Qingdao	Homo sapiens	633	0	0	1	1.00
49	GCA_039615445.1	Lacticaseibacillus paracasei	NKM 5.4	SAMN41068727	2016-02	Viet Nam: Khanh Hoa	-	633	0	0	2	2.00
50	GCA_021650835.1	Lacticaseibacillus paracasei subsp. paracasei	GR0562	SAMN25145123	2007-12	Taiwan	Homo sapiens	634	0	0	1	1.00
51	GCA_028609725.1	Lacticaseibacillus paracasei	CLP-C10	SAMN14677579	2018-12	China	-	634	0	0	1	1.00
52	GCA_030361365.1	Lacticaseibacillus paracasei	TOM.9	SAMN35776875	2022-04	Russia: North Ossetia	-	634	0	0	2	2.00
53	GCA_015319235.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0543	SAMN16657553	-	South Korea	-	635	0	0	1	1.00
54	GCA_046939035.1	Lacticaseibacillus paracasei subsp. paracasei	M587A	SAMN35847929	2019	Czech Republic	wild boar	635	0	0	2	2.00
55	GCA_001895185.1	Lacticaseibacillus paracasei	-	SAMD00029052	-	-	-	637	0	0	2	2.00
56	GCA_003713005.1	Lacticaseibacillus paracasei	FAM7821	SAMN04088894	-	Switzerland	-	637	0	0	2	2.00
57	GCA_012932835.1	Lacticaseibacillus paracasei	CRF28	SAMN05660651	-	USA	-	637	0	0	2	2.00
58	GCA_015476075.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0245	SAMN16657550	-	South Korea	-	637	0	0	1	1.00
59	GCA_015476155.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0625	SAMN16668564	-	South Korea	-	637	0	0	1	1.00
60	GCA_031348425.1	Lacticaseibacillus paracasei	KCKM 0245	SAMN37235621	2016-07-08	South Korea	-	637	0	0	1	1.00
61	GCA_040822445.1	Lacticaseibacillus paracasei subsp. paracasei	BS2-PB5	SAMN42029631	2022-02-20	Indonesia: Tangerang	Homo sapiens	637	0	0	1	1.00
62	GCA_000026485.1	Lacticaseibacillus paracasei	BL23	SAMEA2272724	-	-	-	638	0	0	1	1.00
63	GCA_000309665.1	Lacticaseibacillus paracasei	M36	SAMN02472000	-	USA: Wisconsin	-	638	0	0	2	2.00
64	GCA_023656965.1	Lacticaseibacillus paracasei	ATCC 27092	SAMN11309554	1970	Japan: Kanzaki	Homo sapiens	638	0	0	2	2.00
65	GCA_030061895.1	Lacticaseibacillus paracasei	GM-080	SAMN27485237	2019-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	638	0	0	1	1.00
66	GCA_031461095.1	Lacticaseibacillus paracasei	KCKM 0992	SAMN37256209	2015	South Korea	-	638	0	0	1	1.00
67	GCA_044990665.1	Lacticaseibacillus paracasei	FNCPS K7	SAMN44657157	1987-08-12	Russia: Kislovodsk	-	638	0	0	2	2.00
68	GCA_965138865.1	Lacticaseibacillus paracasei	CIP109805	SAMEA117660480	-	-	-	638	0	0	2	2.00
69	GCA_000194785.1	Lacticaseibacillus paracasei	LC2W	SAMN02603877	-	China: Inner Mongolia	-	639	0	0	1	1.00
70	GCA_007292115.1	Lacticaseibacillus paracasei	CBA3611	SAMN11890849	2018-11	South Korea: Gwangju	Homo sapiens	639	0	0	1	1.00
71	GCA_011031945.1	Lacticaseibacillus paracasei	VA02-1AN	SAMN14087235	2015-08	Thailand: Khon Kean	Homo sapiens	639	0	0	2	2.00
72	GCA_023674545.1	Lacticaseibacillus paracasei	401	SAMN28818858	2021-10-10T14:30:10Z	China:kunming	-	639	0	0	1	1.00
73	GCA_025190725.1	Lacticaseibacillus paracasei	CIRM-BIA 699	SAMN10365439	1972	-	-	639	0	0	2	2.00
74	GCA_025631055.1	Lacticaseibacillus paracasei	PB6	SAMN31096049	2022-08-25	Canada: Ontario	-	639	0	0	2	2.00
75	GCA_025660485.1	Lacticaseibacillus paracasei	PB5	SAMN31096048	2022-08-25	Canada: Ontario	-	639	0	0	2	2.00
76	GCA_026797475.1	Lacticaseibacillus paracasei	CBP-1042	SAMN27675067	-	-	-	639	0	0	2	2.00
77	GCA_028320445.1	Lacticaseibacillus paracasei	1001095st2_H2_1025SCRN_200924	SAMN31322629	2020-09-24	USA	Homo sapiens	639	0	0	2	2.00
78	GCA_028321445.1	Lacticaseibacillus paracasei	1001095st2_D7_1025SCRN_200924	SAMN31322627	2020-09-24	USA	Homo sapiens	639	0	0	2	2.00
79	GCA_028878305.1	Lacticaseibacillus paracasei	NRRL B-456	SAMN23708197	2012-01-30	Italy	-	639	0	0	2	2.00
80	GCA_039650495.1	Lacticaseibacillus paracasei	DDS12	SAMN41053268	2023-11-20	India: Tamil Nadu	-	639	0	0	1	1.00
81	GCA_041734755.1	Lacticaseibacillus paracasei	YGRT25	SAMN43028910	2024-07-12	South Korea	-	639	0	0	1	1.00
82	GCA_042657205.1	Lacticaseibacillus paracasei	L45	SAMN43851867	-	Thailand: Bangkok	Human (Breastfed infant)	639	0	0	1	1.00
83	GCA_000194765.1	Lacticaseibacillus paracasei	BD-II	SAMN02603876	-	China	-	640	0	0	1	1.00
84	GCA_000309645.1	Lacticaseibacillus paracasei	CRF28	SAMN02472005	-	USA	Homo sapiens	640	0	0	2	2.00
85	GCA_002849575.1	Lacticaseibacillus paracasei	DUP 13076	SAMN08239980	2013	USA	-	640	0	0	2	2.00
86	GCA_012932815.1	Lacticaseibacillus paracasei	UW1	SAMN05660434	-	USA: Wisconsin	-	640	0	0	2	2.00
87	GCA_024665815.1	Lacticaseibacillus paracasei subsp. paracasei	01	SAMN29862210	-	-	Homo sapiens	640	0	0	1	1.00
88	GCA_024999945.1	Lacticaseibacillus paracasei	88	SAMN10365669	2003	-	-	640	0	0	2	2.00
89	GCA_025190575.1	Lacticaseibacillus paracasei	CIRM-BIA 770	SAMN10365448	1971	Japan	-	640	0	0	2	2.00
90	GCA_025190665.1	Lacticaseibacillus paracasei	CIRM-BIA 655	SAMN10365443	1995	France	-	640	0	0	2	2.00
91	GCA_025215665.1	Lacticaseibacillus paracasei	ALAC-4	SAMN10688387	-	-	-	640	0	0	1	1.00
92	GCA_028206475.1	Lacticaseibacillus paracasei	SRCM217440	SAMN32670666	2022-07	South Korea:Sunchang	-	640	0	0	1	1.00
93	GCA_028878155.1	Lacticaseibacillus paracasei	DIALYac	SAMN23708207	2012-01-30	Italy	-	640	0	0	2	2.00
94	GCA_032290425.1	Lacticaseibacillus paracasei	ASM82903v1	SAMN37553482	2022-10-13	China	Homo sapiens	640	0	0	2	2.00
95	GCA_037283385.1	Lacticaseibacillus paracasei	NRC_P4	SAMN32629231	2020-03	Egypt:Giza	cow	640	0	0	2	2.00
96	GCA_000318035.1	Lacticaseibacillus paracasei	W56	SAMEA2271945	-	-	-	641	0	0	1	1.00
97	GCA_000410415.1	Lacticaseibacillus paracasei subsp. paracasei Lpp37	Lpp37	SAMN02469718	1994	-	Homo sapiens	641	0	0	2	2.00
98	GCA_003957435.1	Lacticaseibacillus paracasei subsp. tolerans	AO356	SAMN08200884	2016-10-13	South Korea: Seoul	-	641	0	0	1	1.00
99	GCA_004078565.1	Lacticaseibacillus paracasei	SRCM103424	SAMN10743383	2018	South Korea	-	641	0	0	1	1.00
100	GCA_022478075.1	Lacticaseibacillus paracasei	VHProbi F22	SAMN23765140	2019-11-18	China:Inner Mongolia Autonomous Region	-	641	0	0	1	1.00