Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_003712835.1	Lacticaseibacillus paracasei	FAM8407	SAMN04088897	-	Switzerland	-	0	0	0	2	2.00
2	GCA_003177075.1	Lacticaseibacillus paracasei	EG9	SAMN09239981	2012	Japan: Ibaraki	-	489	0	0	1	1.00
3	GCA_035021805.1	Lacticaseibacillus paracasei	SRX10	SAMN38318108	2019	Greece: Attiki	-	490	0	0	2	2.00
4	GCA_039566755.1	Lacticaseibacillus paracasei	Z34	SAMN41162779	2022-10-11	Slovakia	-	491	0	0	2	2.00
5	GCA_003346025.1	Lacticaseibacillus paracasei	KMB_622	SAMN09398954	2008	Slovakia	-	497	0	0	2	2.00
6	GCA_047946965.1	Lacticaseibacillus paracasei	XM-38	SAMN30660290	2017-06-01	China:Inner Mongolia	-	497	0	0	1	1.00
7	GCA_003712585.1	Lacticaseibacillus paracasei	FAM18172	SAMN04088876	2003	Switzerland	-	499	0	0	2	2.00
8	GCA_003712325.1	Lacticaseibacillus paracasei	FAM18123	SAMN04088867	2003	Switzerland	-	505	0	0	2	2.00
9	GCA_003712225.1	Lacticaseibacillus paracasei	FAM10859	SAMN04088858	-	Switzerland	-	507	0	0	2	2.00
10	GCA_039631115.1	Lacticaseibacillus paracasei	L17	SAMN41249976	2023-05-30	Slovakia	-	507	0	0	2	2.00
11	GCA_039631235.1	Lacticaseibacillus paracasei	L18	SAMN41249977	2023-05-30	Slovakia	-	507	0	0	2	2.00
12	GCA_000409935.1	Lacticaseibacillus paracasei subsp. paracasei Lpp120	Lpp120	SAMN02469723	2003	-	-	509	0	0	2	2.00
13	GCA_039631055.1	Lacticaseibacillus paracasei	B19	SAMN41249973	2023-04-25	Slovakia	-	511	0	0	2	2.00
14	GCA_039631165.1	Lacticaseibacillus paracasei	B25	SAMN41249975	2023-04-25	Slovakia	-	511	0	0	2	2.00
15	GCA_039631215.1	Lacticaseibacillus paracasei	B20	SAMN41249974	2023-04-25	Slovakia	-	511	0	0	2	2.00
16	GCA_039631065.1	Lacticaseibacillus paracasei	B18	SAMN41249972	2023-04-25	Slovakia	-	512	0	0	2	2.00
17	GCA_030361125.1	Lacticaseibacillus paracasei	TOM.15.25	SAMN35776887	2021-11	Russia: Primorsky Krai	-	514	0	0	2	2.00
18	GCA_003712705.1	Lacticaseibacillus paracasei	FAM22279	SAMN04088884	-	Switzerland	-	515	0	0	2	2.00
19	GCA_009739485.1	Lacticaseibacillus paracasei subsp. paracasei	IBB3423	SAMN07167770	2013-09-29	Poland	-	521	0	0	1	1.00
20	GCA_024717335.1	Lacticaseibacillus paracasei	VHProbi M56	SAMN27162336	2021-01-25	China:Qingdao	Homo sapiens	521	0	0	1	1.00
21	GCA_037966745.1	Lacticaseibacillus paracasei	ATA-LTC-Lp040802	SAMN40643417	2002-08-04	Turkey:Izmir	Homo sapiens	521	0	0	2	2.00
22	GCA_003712795.1	Lacticaseibacillus paracasei	FAM4067	SAMN04088889	1995	Switzerland	-	522	0	0	2	2.00
23	GCA_038025045.1	Lacticaseibacillus paracasei	ATA-LTC-Lp121000	SAMN40643419	2000-10-12	Turkey:Igdir	animal	522	0	0	2	2.00
24	GCA_023375875.1	Lacticaseibacillus paracasei	SP5	SAMN25227086	2018	Greece: Orestiada	-	523	0	0	2	2.00
25	GCA_025190495.1	Lacticaseibacillus paracasei	CIRM-BIA 288	SAMN10365452	2008	France	-	524	0	0	2	2.00
26	GCA_025190685.1	Lacticaseibacillus paracasei	CIRM-BIA 1445	SAMN10365442	1996	France	-	524	0	0	2	2.00
27	GCA_028878315.1	Lacticaseibacillus paracasei	DSM 4905	SAMN23708196	2012-01-30	Italy	Homo sapiens	525	0	0	2	2.00
28	GCA_000410175.1	Lacticaseibacillus paracasei subsp. paracasei Lpp225	Lpp225	SAMN02469715	2009	-	-	527	0	0	2	2.00
29	GCA_003712265.1	Lacticaseibacillus paracasei	FAM18110	SAMN04088863	2003	Switzerland	-	528	0	0	2	2.00
30	GCA_018257175.1	Lacticaseibacillus paracasei	Dm-2019-60	SAMN17146146	2019	USA: Ithaca, NY	Drosophila melanogaster	528	0	0	2	2.00
31	GCA_029906315.1	Lacticaseibacillus paracasei subsp. paracasei	MI29	SAMN34105739	2022-09-01	South Korea	Homo sapiens	528	0	0	1	1.00
32	GCA_002813615.1	Lacticaseibacillus paracasei subsp. paracasei	TMW 1.1434	SAMN05356834	-	Germany	-	529	0	0	1	1.00
33	GCA_000309765.1	Lacticaseibacillus paracasei	Lc-10	SAMN02472012	-	-	-	530	0	0	2	2.00
34	GCA_040430295.1	Lacticaseibacillus paracasei	ATA-LTC-Lp041103	SAMN41784243	2003-11-04	Turkey: Krkkale, Hacbal	Animal	530	0	0	2	2.00
35	GCA_044740695.1	Lacticaseibacillus paracasei	E11.5	SAMN44487087	-	Ethiopia	-	530	0	0	1	1.00
36	GCA_002914885.1	Lacticaseibacillus paracasei	BP07	SAMN07187783	2017	Italy	-	531	0	0	2	2.00
37	GCA_025137495.1	Lacticaseibacillus paracasei	L1	SAMN20355457	2015-10-10	China:Jinzhou	-	531	0	0	1	1.00
38	GCA_000474615.1	Lacticaseibacillus paracasei	5b	SAMN02470054	-	-	-	532	0	0	2	2.00
39	GCA_000410135.1	Lacticaseibacillus paracasei subsp. paracasei Lpp17	Lpp17	SAMN02469707	1987	-	-	534	0	0	2	2.00
40	GCA_010363715.1	Lacticaseibacillus paracasei	D10-4	SAMN13943411	2018-01-10	USA	Homo sapiens	534	0	0	2	2.00
41	GCA_028321965.1	Lacticaseibacillus paracasei	1001216st1_C7_1001216I_160404	SAMN31322631	2016-04-04	USA	Homo sapiens	534	0	0	2	2.00
42	GCA_028322025.1	Lacticaseibacillus paracasei	1001216st1_H7_1001713B170131_170501	SAMN31322633	2017-05-01	USA	Homo sapiens	534	0	0	2	2.00
43	GCA_028322845.1	Lacticaseibacillus paracasei	1001216st1_D9_D55t1_190419	SAMN31322632	2019-04-19	USA	Homo sapiens	534	0	0	2	2.00
44	GCA_028322955.1	Lacticaseibacillus paracasei	1001216st1_B6_D55t1_190419	SAMN31322630	2019-04-19	USA	Homo sapiens	534	0	0	2	2.00
45	GCA_040093155.1	Lacticaseibacillus paracasei	CLA-AA-H40	SAMN40631522	2019-07-25	Germany:Aachen	Homo sapiens	534	0	0	2	2.00
46	GCA_047785155.1	Lacticaseibacillus paracasei	SRCM212209	SAMN46082883	2020-10	South Korea:Sunchang	-	534	0	0	1	1.00
47	GCA_000958485.1	Lacticaseibacillus paracasei NRIC 1981	-	SAMD00000558	-	-	-	535	0	0	2	2.00
48	GCA_015476155.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0625	SAMN16668564	-	South Korea	-	535	0	0	1	1.00
49	GCA_024125225.1	Lacticaseibacillus paracasei	NB2B-AER-MRS-02	SAMN28102056	2016-04	-	Homo sapiens	535	0	0	1	1.00
50	GCA_000309705.1	Lacticaseibacillus paracasei	UCD174	SAMN02472002	-	USA: California	-	537	0	0	2	2.00
51	GCA_033815995.1	Lacticaseibacillus paracasei	YE01	SAMN37887709	-	China	-	537	0	0	1	1.00
52	GCA_021650835.1	Lacticaseibacillus paracasei subsp. paracasei	GR0562	SAMN25145123	2007-12	Taiwan	Homo sapiens	538	0	0	1	1.00
53	GCA_036762765.1	Lacticaseibacillus paracasei	1567_IL3212	SAMN37904769	-	-	animal	538	0	0	2	2.00
54	GCA_040822445.1	Lacticaseibacillus paracasei subsp. paracasei	BS2-PB5	SAMN42029631	2022-02-20	Indonesia: Tangerang	Homo sapiens	538	0	0	1	1.00
55	GCA_015476075.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0245	SAMN16657550	-	South Korea	-	539	0	0	1	1.00
56	GCA_018729425.1	Lacticaseibacillus paracasei	MYD3	SAMN16551136	2017	Indonesia: Yogyakarta	-	539	0	0	2	2.00
57	GCA_031348425.1	Lacticaseibacillus paracasei	KCKM 0245	SAMN37235621	2016-07-08	South Korea	-	539	0	0	1	1.00
58	GCA_031461095.1	Lacticaseibacillus paracasei	KCKM 0992	SAMN37256209	2015	South Korea	-	539	0	0	1	1.00
59	GCA_036762785.1	Lacticaseibacillus paracasei	1571-2_IL3211	SAMN37904772	-	-	animal	539	0	0	2	2.00
60	GCA_034555135.1	Lacticaseibacillus paracasei	BF3	SAMN38857134	2021	Spain:Galicia	Brachionus plicatilis	547	0	0	2	2.00
61	GCA_039566645.1	Lacticaseibacillus paracasei	A191	SAMN41162755	2007	Slovakia	-	547	0	0	2	2.00
62	GCA_040267725.1	Lacticaseibacillus paracasei	TCI727	SAMN41829189	2020-05-01	Taiwan:Taipei	-	548	0	0	1	1.00
63	GCA_003712535.1	Lacticaseibacillus paracasei	FAM18175	SAMN04088877	2003	Switzerland	-	549	0	0	2	2.00
64	GCA_002027405.1	Lacticaseibacillus paracasei	W16	SAMN06479973	2012-03	China: Nanchang	-	554	0	0	2	2.00
65	GCA_003712625.1	Lacticaseibacillus paracasei	FAM19404	SAMN04088880	1990	Switzerland	-	558	0	0	2	2.00
66	GCA_025211235.1	Lacticaseibacillus paracasei	1017	SAMN10365678	2014	Ethiopia	-	558	0	0	2	2.00
67	GCA_004167215.1	Lacticaseibacillus paracasei	co_0103	SAMN10239551	2015-01	USA: Cambridge	Homo sapiens	561	1	2	2	3.00
68	GCA_009679435.1	Lacticaseibacillus paracasei	BIOML-A3	SAMN11946116	2015-12-09	USA:Boston	Homo sapiens	561	0	0	2	2.00
69	GCA_009679495.1	Lacticaseibacillus paracasei	BIOML-A2	SAMN11946115	2015-12-09	USA:Boston	Homo sapiens	561	1	2	2	3.00
70	GCA_009679505.1	Lacticaseibacillus paracasei	BIOML-A1	SAMN11946114	2015-12-09	USA:Boston	Homo sapiens	561	0	0	2	2.00
71	GCA_019641395.1	Lacticaseibacillus paracasei	LB113R	SAMN20672827	2018	Denmark	-	561	0	0	2	2.00
72	GCA_026967095.1	Lacticaseibacillus paracasei	Lpc_yogurt_C5	SAMN32062184	2021-07-27	USA:Chicago	-	561	0	0	2	2.00
73	GCA_026967175.1	Lacticaseibacillus paracasei	Lpc_yogurt_C3	SAMN32062182	2021-07-27	USA:Chicago	-	561	0	0	3	3.00
74	GCA_026967235.1	Lacticaseibacillus paracasei	Lpc_yogurt_C1	SAMN32062180	2021-07-27	USA:Chicago	-	561	0	0	2	2.00
75	GCA_028322925.1	Lacticaseibacillus paracasei	1001217st1_H10_1001216I_160404	SAMN31322636	2016-04-04	USA	Homo sapiens	561	0	0	2	2.00
76	GCA_003712645.1	Lacticaseibacillus paracasei	FAM22276	SAMN04088881	1990	Switzerland	-	562	0	0	2	2.00
77	GCA_003712935.1	Lacticaseibacillus paracasei	FAM3248	SAMN04088887	1990	Switzerland	-	562	0	0	2	2.00
78	GCA_000309605.1	Lacticaseibacillus paracasei	32G	SAMN02472010	-	USA: Wisconsin	-	563	0	0	2	2.00
79	GCA_025215665.1	Lacticaseibacillus paracasei	ALAC-4	SAMN10688387	-	-	-	563	0	0	1	1.00
80	GCA_000410315.1	Lacticaseibacillus paracasei subsp. paracasei Lpp14	Lpp14	SAMN02469711	1989	-	-	564	0	0	2	2.00
81	GCA_009679455.1	Lacticaseibacillus paracasei	BIOML-A4	SAMN11946117	2015-12-09	USA:Boston	Homo sapiens	564	0	0	2	2.00
82	GCA_025190665.1	Lacticaseibacillus paracasei	CIRM-BIA 655	SAMN10365443	1995	France	-	564	0	0	2	2.00
83	GCA_002901165.3	Lacticaseibacillus paracasei subsp. paracasei	NTU 101	SAMN07445234	2013-09-16	Taiwan:Taipei	Homo sapiens	565	0	0	1	1.00
84	GCA_028878255.1	Lacticaseibacillus paracasei	I2	SAMN23708201	2012-01-30	Italy	-	566	0	0	2	2.00
85	GCA_039838545.1	Lacticaseibacillus paracasei	1001217st1_G4_1001217B_191108	SAMN31322635	2019-11-08	USA	Homo sapiens	566	0	0	2	2.00
86	GCA_001436385.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	DSM 5622	SAMN02369433	1989	-	-	569	0	0	2	2.00
87	GCA_007989125.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00166241	-	-	-	569	0	0	2	2.00
88	GCA_000159495.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	ATCC 25302	SAMN00001470	-	-	Homo sapiens	570	0	0	2	2.00
89	GCA_000829035.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00010723	-	-	-	570	0	0	1	1.00
90	GCA_004354655.1	Lacticaseibacillus paracasei subsp. paracasei	ATCC 25302	SAMN08555498	2017	Denmark	-	570	0	0	2	2.00
91	GCA_013867595.1	Lacticaseibacillus paracasei	s-16	SAMN15579850	2020-07-20	-	-	570	0	0	2	2.00
92	GCA_032466015.1	Lacticaseibacillus paracasei	LMG 19719	SAMN37405140	1999	Denmark	-	570	0	0	1	1.00
93	GCA_000014525.1	Lacticaseibacillus paracasei ATCC 334	ATCC 334	SAMN02598528	-	-	-	572	0	0	1	1.00
94	GCA_002120125.1	Lacticaseibacillus paracasei	HZ-1	SAMN05954276	2012-06	China: Tianjin	-	572	0	0	2	2.00
95	GCA_039838525.1	Lacticaseibacillus paracasei	1001217st1_A4_1001217B_191108	SAMN31322634	2019-11-08	USA	Homo sapiens	573	0	0	2	2.00
96	GCA_018286435.1	Lacticaseibacillus paracasei subsp. tolerans	2A	SAMN18869149	2014-03-31	USA	-	578	0	0	1	1.00
97	GCA_002027415.1	Lacticaseibacillus paracasei	W14	SAMN06480069	2012-03	China: Nanchang	-	582	0	0	2	2.00
98	GCA_001514415.1	Lacticaseibacillus paracasei	KL1	SAMN04378089	2006-03	China:Jilin	-	583	0	0	1	1.00
99	GCA_000409855.1	Lacticaseibacillus paracasei subsp. paracasei Lpp122	Lpp122	SAMN02469705	2003	-	-	588	0	0	2	2.00
100	GCA_039838565.1	Lacticaseibacillus paracasei	1001217st1_H5_1001217B_191108	SAMN31322637	2019-11-08	USA	Homo sapiens	588	0	0	2	2.00