GCA_004025165.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMLOBEPDF_1 (original name was: gnl|Prokka|MLOBEPDF_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	cyclic-lactone-autoinducer	191,639	212,344

gnlProkkaMLOBEPDF_2 (original name was: gnl|Prokka|MLOBEPDF_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	110,084	117,968

gnlProkkaMLOBEPDF_3 (original name was: gnl|Prokka|MLOBEPDF_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	terpene	26,122	47,003

gnlProkkaMLOBEPDF_56 (original name was: gnl|Prokka|MLOBEPDF_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 56.1	T3PKS	147,595	174,946

Region	Type	From	To	Similarity
Region 1.1	cyclic-lactone-autoinducer	191,639	212,344
Region 2.1	RiPP-like	110,084	117,968
Region 3.1	terpene	26,122	47,003
Region 56.1	T3PKS	147,595	174,946

No secondary metabolite regions were found in these records:: gnlProkkaMLOBEPDF_4 (original name was: gnl|Prokka|MLOBEPDF_4); gnlProkkaMLOBEPDF_5 (original name was: gnl|Prokka|MLOBEPDF_5); gnlProkkaMLOBEPDF_6 (original name was: gnl|Prokka|MLOBEPDF_6); gnlProkkaMLOBEPDF_7 (original name was: gnl|Prokka|MLOBEPDF_7); gnlProkkaMLOBEPDF_8 (original name was: gnl|Prokka|MLOBEPDF_8); gnlProkkaMLOBEPDF_9 (original name was: gnl|Prokka|MLOBEPDF_9); gnlProkkaMLOBEPDF_10 (original name was: gnl|Prokka|MLOBEPDF_10); gnlProkkaMLOBEPDF_11 (original name was: gnl|Prokka|MLOBEPDF_11); gnlProkkaMLOBEPDF_12 (original name was: gnl|Prokka|MLOBEPDF_12); gnlProkkaMLOBEPDF_13 (original name was: gnl|Prokka|MLOBEPDF_13); gnlProkkaMLOBEPDF_14 (original name was: gnl|Prokka|MLOBEPDF_14); gnlProkkaMLOBEPDF_15 (original name was: gnl|Prokka|MLOBEPDF_15); gnlProkkaMLOBEPDF_16 (original name was: gnl|Prokka|MLOBEPDF_16); gnlProkkaMLOBEPDF_17 (original name was: gnl|Prokka|MLOBEPDF_17); gnlProkkaMLOBEPDF_18 (original name was: gnl|Prokka|MLOBEPDF_18); gnlProkkaMLOBEPDF_19 (original name was: gnl|Prokka|MLOBEPDF_19); gnlProkkaMLOBEPDF_20 (original name was: gnl|Prokka|MLOBEPDF_20); gnlProkkaMLOBEPDF_21 (original name was: gnl|Prokka|MLOBEPDF_21); gnlProkkaMLOBEPDF_22 (original name was: gnl|Prokka|MLOBEPDF_22); gnlProkkaMLOBEPDF_23 (original name was: gnl|Prokka|MLOBEPDF_23); gnlProkkaMLOBEPDF_24 (original name was: gnl|Prokka|MLOBEPDF_24); gnlProkkaMLOBEPDF_25 (original name was: gnl|Prokka|MLOBEPDF_25); gnlProkkaMLOBEPDF_26 (original name was: gnl|Prokka|MLOBEPDF_26); gnlProkkaMLOBEPDF_27 (original name was: gnl|Prokka|MLOBEPDF_27); gnlProkkaMLOBEPDF_28 (original name was: gnl|Prokka|MLOBEPDF_28); gnlProkkaMLOBEPDF_29 (original name was: gnl|Prokka|MLOBEPDF_29); gnlProkkaMLOBEPDF_30 (original name was: gnl|Prokka|MLOBEPDF_30); gnlProkkaMLOBEPDF_31 (original name was: gnl|Prokka|MLOBEPDF_31); gnlProkkaMLOBEPDF_32 (original name was: gnl|Prokka|MLOBEPDF_32); gnlProkkaMLOBEPDF_33 (original name was: gnl|Prokka|MLOBEPDF_33); gnlProkkaMLOBEPDF_34 (original name was: gnl|Prokka|MLOBEPDF_34); gnlProkkaMLOBEPDF_35 (original name was: gnl|Prokka|MLOBEPDF_35); gnlProkkaMLOBEPDF_36 (original name was: gnl|Prokka|MLOBEPDF_36); gnlProkkaMLOBEPDF_37 (original name was: gnl|Prokka|MLOBEPDF_37); gnlProkkaMLOBEPDF_38 (original name was: gnl|Prokka|MLOBEPDF_38); gnlProkkaMLOBEPDF_39 (original name was: gnl|Prokka|MLOBEPDF_39); gnlProkkaMLOBEPDF_40 (original name was: gnl|Prokka|MLOBEPDF_40); gnlProkkaMLOBEPDF_41 (original name was: gnl|Prokka|MLOBEPDF_41); gnlProkkaMLOBEPDF_42 (original name was: gnl|Prokka|MLOBEPDF_42); gnlProkkaMLOBEPDF_43 (original name was: gnl|Prokka|MLOBEPDF_43); gnlProkkaMLOBEPDF_44 (original name was: gnl|Prokka|MLOBEPDF_44); gnlProkkaMLOBEPDF_45 (original name was: gnl|Prokka|MLOBEPDF_45); gnlProkkaMLOBEPDF_46 (original name was: gnl|Prokka|MLOBEPDF_46); gnlProkkaMLOBEPDF_47 (original name was: gnl|Prokka|MLOBEPDF_47); gnlProkkaMLOBEPDF_48 (original name was: gnl|Prokka|MLOBEPDF_48); gnlProkkaMLOBEPDF_49 (original name was: gnl|Prokka|MLOBEPDF_49); gnlProkkaMLOBEPDF_50 (original name was: gnl|Prokka|MLOBEPDF_50); gnlProkkaMLOBEPDF_51 (original name was: gnl|Prokka|MLOBEPDF_51); gnlProkkaMLOBEPDF_52 (original name was: gnl|Prokka|MLOBEPDF_52); gnlProkkaMLOBEPDF_53 (original name was: gnl|Prokka|MLOBEPDF_53); gnlProkkaMLOBEPDF_54 (original name was: gnl|Prokka|MLOBEPDF_54); gnlProkkaMLOBEPDF_55 (original name was: gnl|Prokka|MLOBEPDF_55); gnlProkkaMLOBEPDF_57 (original name was: gnl|Prokka|MLOBEPDF_57); gnlProkkaMLOBEPDF_58 (original name was: gnl|Prokka|MLOBEPDF_58); gnlProkkaMLOBEPDF_67 (original name was: gnl|Prokka|MLOBEPDF_67); gnlProkkaMLOBEPDF_77 (original name was: gnl|Prokka|MLOBEPDF_77); gnlProkkaMLOBEPDF_78 (original name was: gnl|Prokka|MLOBEPDF_78)

Compact view

gnlProkkaMLOBEPDF_1 - Region 1 - cyclic-lactone-autoinducer

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Location: 191,639 - 212,344 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMLOBEPDF_2 - Region 1 - RiPP-like

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Location: 110,084 - 117,968 nt. (total: 7,885 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMLOBEPDF_3 - Region 1 - terpene

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Location: 26,122 - 47,003 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMLOBEPDF_56 - Region 1 - T3PKS

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Location: 147,595 - 174,946 nt. (total: 27,352 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.