GCA_004123065.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaINPOEEIC_33 (original name was: gnl|Prokka|INPOEEIC_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	lanthipeptide-class-iv	1	14,198

Region	Type	From	To	Most similar known cluster	Similarity
Region 33.1	lanthipeptide-class-iv	1	14,198

No secondary metabolite regions were found in these records:: gnlProkkaINPOEEIC_1 (original name was: gnl|Prokka|INPOEEIC_1); gnlProkkaINPOEEIC_2 (original name was: gnl|Prokka|INPOEEIC_2); gnlProkkaINPOEEIC_3 (original name was: gnl|Prokka|INPOEEIC_3); gnlProkkaINPOEEIC_4 (original name was: gnl|Prokka|INPOEEIC_4); gnlProkkaINPOEEIC_5 (original name was: gnl|Prokka|INPOEEIC_5); gnlProkkaINPOEEIC_6 (original name was: gnl|Prokka|INPOEEIC_6); gnlProkkaINPOEEIC_7 (original name was: gnl|Prokka|INPOEEIC_7); gnlProkkaINPOEEIC_8 (original name was: gnl|Prokka|INPOEEIC_8); gnlProkkaINPOEEIC_9 (original name was: gnl|Prokka|INPOEEIC_9); gnlProkkaINPOEEIC_10 (original name was: gnl|Prokka|INPOEEIC_10); gnlProkkaINPOEEIC_11 (original name was: gnl|Prokka|INPOEEIC_11); gnlProkkaINPOEEIC_12 (original name was: gnl|Prokka|INPOEEIC_12); gnlProkkaINPOEEIC_13 (original name was: gnl|Prokka|INPOEEIC_13); gnlProkkaINPOEEIC_14 (original name was: gnl|Prokka|INPOEEIC_14); gnlProkkaINPOEEIC_15 (original name was: gnl|Prokka|INPOEEIC_15); gnlProkkaINPOEEIC_16 (original name was: gnl|Prokka|INPOEEIC_16); gnlProkkaINPOEEIC_17 (original name was: gnl|Prokka|INPOEEIC_17); gnlProkkaINPOEEIC_18 (original name was: gnl|Prokka|INPOEEIC_18); gnlProkkaINPOEEIC_19 (original name was: gnl|Prokka|INPOEEIC_19); gnlProkkaINPOEEIC_20 (original name was: gnl|Prokka|INPOEEIC_20); gnlProkkaINPOEEIC_21 (original name was: gnl|Prokka|INPOEEIC_21); gnlProkkaINPOEEIC_22 (original name was: gnl|Prokka|INPOEEIC_22); gnlProkkaINPOEEIC_23 (original name was: gnl|Prokka|INPOEEIC_23); gnlProkkaINPOEEIC_24 (original name was: gnl|Prokka|INPOEEIC_24); gnlProkkaINPOEEIC_25 (original name was: gnl|Prokka|INPOEEIC_25); gnlProkkaINPOEEIC_26 (original name was: gnl|Prokka|INPOEEIC_26); gnlProkkaINPOEEIC_27 (original name was: gnl|Prokka|INPOEEIC_27); gnlProkkaINPOEEIC_28 (original name was: gnl|Prokka|INPOEEIC_28); gnlProkkaINPOEEIC_29 (original name was: gnl|Prokka|INPOEEIC_29); gnlProkkaINPOEEIC_30 (original name was: gnl|Prokka|INPOEEIC_30); gnlProkkaINPOEEIC_31 (original name was: gnl|Prokka|INPOEEIC_31); gnlProkkaINPOEEIC_32 (original name was: gnl|Prokka|INPOEEIC_32); gnlProkkaINPOEEIC_34 (original name was: gnl|Prokka|INPOEEIC_34); gnlProkkaINPOEEIC_35 (original name was: gnl|Prokka|INPOEEIC_35); gnlProkkaINPOEEIC_36 (original name was: gnl|Prokka|INPOEEIC_36); gnlProkkaINPOEEIC_37 (original name was: gnl|Prokka|INPOEEIC_37); gnlProkkaINPOEEIC_38 (original name was: gnl|Prokka|INPOEEIC_38); gnlProkkaINPOEEIC_39 (original name was: gnl|Prokka|INPOEEIC_39); gnlProkkaINPOEEIC_40 (original name was: gnl|Prokka|INPOEEIC_40); gnlProkkaINPOEEIC_41 (original name was: gnl|Prokka|INPOEEIC_41); gnlProkkaINPOEEIC_42 (original name was: gnl|Prokka|INPOEEIC_42); gnlProkkaINPOEEIC_43 (original name was: gnl|Prokka|INPOEEIC_43); gnlProkkaINPOEEIC_44 (original name was: gnl|Prokka|INPOEEIC_44); gnlProkkaINPOEEIC_45 (original name was: gnl|Prokka|INPOEEIC_45); gnlProkkaINPOEEIC_46 (original name was: gnl|Prokka|INPOEEIC_46); gnlProkkaINPOEEIC_47 (original name was: gnl|Prokka|INPOEEIC_47); gnlProkkaINPOEEIC_48 (original name was: gnl|Prokka|INPOEEIC_48); gnlProkkaINPOEEIC_49 (original name was: gnl|Prokka|INPOEEIC_49); gnlProkkaINPOEEIC_50 (original name was: gnl|Prokka|INPOEEIC_50); gnlProkkaINPOEEIC_51 (original name was: gnl|Prokka|INPOEEIC_51); gnlProkkaINPOEEIC_52 (original name was: gnl|Prokka|INPOEEIC_52); gnlProkkaINPOEEIC_53 (original name was: gnl|Prokka|INPOEEIC_53); gnlProkkaINPOEEIC_54 (original name was: gnl|Prokka|INPOEEIC_54); gnlProkkaINPOEEIC_55 (original name was: gnl|Prokka|INPOEEIC_55); gnlProkkaINPOEEIC_56 (original name was: gnl|Prokka|INPOEEIC_56); gnlProkkaINPOEEIC_57 (original name was: gnl|Prokka|INPOEEIC_57); gnlProkkaINPOEEIC_58 (original name was: gnl|Prokka|INPOEEIC_58); gnlProkkaINPOEEIC_59 (original name was: gnl|Prokka|INPOEEIC_59); gnlProkkaINPOEEIC_60 (original name was: gnl|Prokka|INPOEEIC_60); gnlProkkaINPOEEIC_61 (original name was: gnl|Prokka|INPOEEIC_61); gnlProkkaINPOEEIC_62 (original name was: gnl|Prokka|INPOEEIC_62); gnlProkkaINPOEEIC_63 (original name was: gnl|Prokka|INPOEEIC_63); gnlProkkaINPOEEIC_64 (original name was: gnl|Prokka|INPOEEIC_64); gnlProkkaINPOEEIC_65 (original name was: gnl|Prokka|INPOEEIC_65); gnlProkkaINPOEEIC_66 (original name was: gnl|Prokka|INPOEEIC_66); gnlProkkaINPOEEIC_67 (original name was: gnl|Prokka|INPOEEIC_67); gnlProkkaINPOEEIC_68 (original name was: gnl|Prokka|INPOEEIC_68); gnlProkkaINPOEEIC_69 (original name was: gnl|Prokka|INPOEEIC_69); gnlProkkaINPOEEIC_70 (original name was: gnl|Prokka|INPOEEIC_70); gnlProkkaINPOEEIC_71 (original name was: gnl|Prokka|INPOEEIC_71); gnlProkkaINPOEEIC_72 (original name was: gnl|Prokka|INPOEEIC_72); gnlProkkaINPOEEIC_73 (original name was: gnl|Prokka|INPOEEIC_73); gnlProkkaINPOEEIC_74 (original name was: gnl|Prokka|INPOEEIC_74); gnlProkkaINPOEEIC_75 (original name was: gnl|Prokka|INPOEEIC_75); gnlProkkaINPOEEIC_78 (original name was: gnl|Prokka|INPOEEIC_78); gnlProkkaINPOEEIC_89 (original name was: gnl|Prokka|INPOEEIC_89)

Compact view

gnlProkkaINPOEEIC_33 - Region 1 - lanthipeptide-class-iv

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Location: 1 - 14,198 nt. (total: 14,198 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptide(s) for ctg33_5

ctg33_6

Leader:

MSSVTYLDELDLLVPAEKSQEELAG

Core:

SFVCRTFICKM

Core with dehydrations:

DhaFVCysRDhbFICysKM

antiSMASH-DB 4.0 matches for ctg33_6

100.0% NZ_CP022988.1and 1 other:

NZ_SDJT01000039.1 Lanthipeptides: allorf_05831_05941_lanthipeptide

Lanthipeptides: allorf_2047403_2047513_lanthipeptide

SFVCRTFICKM

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

ctg33_6 - Class III: Cleavage pHMM score: -2.70; RODEO score: 0; Monoisotopic mass: 1297.6 Da; Molecular weight: 1298.6 Da; Number of bridges: 2