GCA_004167055.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKOGKLPJB_2 (original name was: gnl|Prokka|KOGKLPJB_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T3PKS	35,319	76,491

gnlProkkaKOGKLPJB_11 (original name was: gnl|Prokka|KOGKLPJB_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	1,290	11,475

gnlProkkaKOGKLPJB_13 (original name was: gnl|Prokka|KOGKLPJB_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	RiPP-like	81,133	87,785

Region	Type	From	To	Similarity
Region 2.1	T3PKS	35,319	76,491
Region 11.1	RiPP-like	1,290	11,475
Region 13.1	RiPP-like	81,133	87,785

No secondary metabolite regions were found in these records:: gnlProkkaKOGKLPJB_1 (original name was: gnl|Prokka|KOGKLPJB_1); gnlProkkaKOGKLPJB_3 (original name was: gnl|Prokka|KOGKLPJB_3); gnlProkkaKOGKLPJB_4 (original name was: gnl|Prokka|KOGKLPJB_4); gnlProkkaKOGKLPJB_5 (original name was: gnl|Prokka|KOGKLPJB_5); gnlProkkaKOGKLPJB_6 (original name was: gnl|Prokka|KOGKLPJB_6); gnlProkkaKOGKLPJB_7 (original name was: gnl|Prokka|KOGKLPJB_7); gnlProkkaKOGKLPJB_8 (original name was: gnl|Prokka|KOGKLPJB_8); gnlProkkaKOGKLPJB_9 (original name was: gnl|Prokka|KOGKLPJB_9); gnlProkkaKOGKLPJB_10 (original name was: gnl|Prokka|KOGKLPJB_10); gnlProkkaKOGKLPJB_12 (original name was: gnl|Prokka|KOGKLPJB_12); gnlProkkaKOGKLPJB_14 (original name was: gnl|Prokka|KOGKLPJB_14); gnlProkkaKOGKLPJB_15 (original name was: gnl|Prokka|KOGKLPJB_15); gnlProkkaKOGKLPJB_16 (original name was: gnl|Prokka|KOGKLPJB_16); gnlProkkaKOGKLPJB_17 (original name was: gnl|Prokka|KOGKLPJB_17); gnlProkkaKOGKLPJB_18 (original name was: gnl|Prokka|KOGKLPJB_18); gnlProkkaKOGKLPJB_19 (original name was: gnl|Prokka|KOGKLPJB_19); gnlProkkaKOGKLPJB_20 (original name was: gnl|Prokka|KOGKLPJB_20); gnlProkkaKOGKLPJB_21 (original name was: gnl|Prokka|KOGKLPJB_21); gnlProkkaKOGKLPJB_22 (original name was: gnl|Prokka|KOGKLPJB_22); gnlProkkaKOGKLPJB_23 (original name was: gnl|Prokka|KOGKLPJB_23); gnlProkkaKOGKLPJB_24 (original name was: gnl|Prokka|KOGKLPJB_24); gnlProkkaKOGKLPJB_25 (original name was: gnl|Prokka|KOGKLPJB_25); gnlProkkaKOGKLPJB_26 (original name was: gnl|Prokka|KOGKLPJB_26); gnlProkkaKOGKLPJB_27 (original name was: gnl|Prokka|KOGKLPJB_27); gnlProkkaKOGKLPJB_28 (original name was: gnl|Prokka|KOGKLPJB_28); gnlProkkaKOGKLPJB_29 (original name was: gnl|Prokka|KOGKLPJB_29); gnlProkkaKOGKLPJB_30 (original name was: gnl|Prokka|KOGKLPJB_30); gnlProkkaKOGKLPJB_31 (original name was: gnl|Prokka|KOGKLPJB_31); gnlProkkaKOGKLPJB_32 (original name was: gnl|Prokka|KOGKLPJB_32); gnlProkkaKOGKLPJB_33 (original name was: gnl|Prokka|KOGKLPJB_33); gnlProkkaKOGKLPJB_34 (original name was: gnl|Prokka|KOGKLPJB_34); gnlProkkaKOGKLPJB_35 (original name was: gnl|Prokka|KOGKLPJB_35); gnlProkkaKOGKLPJB_36 (original name was: gnl|Prokka|KOGKLPJB_36)

Compact view

gnlProkkaKOGKLPJB_2 - Region 1 - T3PKS

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Location: 35,319 - 76,491 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKOGKLPJB_11 - Region 1 - RiPP-like

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Location: 1,290 - 11,475 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKOGKLPJB_13 - Region 1 - RiPP-like

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Location: 81,133 - 87,785 nt. (total: 6,653 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.