GCA_004300925.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNGBDEFCK_6 (original name was: gnl|Prokka|NGBDEFCK_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	T3PKS	29,613	70,782

gnlProkkaNGBDEFCK_23 (original name was: gnl|Prokka|NGBDEFCK_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	terpene	24,727	45,608

gnlProkkaNGBDEFCK_27 (original name was: gnl|Prokka|NGBDEFCK_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	RiPP-like	29,106	38,021

gnlProkkaNGBDEFCK_30 (original name was: gnl|Prokka|NGBDEFCK_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	cyclic-lactone-autoinducer	14,076	30,827

Region	Type	From	To	Similarity
Region 6.1	T3PKS	29,613	70,782
Region 23.1	terpene	24,727	45,608
Region 27.1	RiPP-like	29,106	38,021
Region 30.1	cyclic-lactone-autoinducer	14,076	30,827

No secondary metabolite regions were found in these records:: gnlProkkaNGBDEFCK_1 (original name was: gnl|Prokka|NGBDEFCK_1); gnlProkkaNGBDEFCK_2 (original name was: gnl|Prokka|NGBDEFCK_2); gnlProkkaNGBDEFCK_3 (original name was: gnl|Prokka|NGBDEFCK_3); gnlProkkaNGBDEFCK_4 (original name was: gnl|Prokka|NGBDEFCK_4); gnlProkkaNGBDEFCK_5 (original name was: gnl|Prokka|NGBDEFCK_5); gnlProkkaNGBDEFCK_7 (original name was: gnl|Prokka|NGBDEFCK_7); gnlProkkaNGBDEFCK_8 (original name was: gnl|Prokka|NGBDEFCK_8); gnlProkkaNGBDEFCK_9 (original name was: gnl|Prokka|NGBDEFCK_9); gnlProkkaNGBDEFCK_10 (original name was: gnl|Prokka|NGBDEFCK_10); gnlProkkaNGBDEFCK_11 (original name was: gnl|Prokka|NGBDEFCK_11); gnlProkkaNGBDEFCK_12 (original name was: gnl|Prokka|NGBDEFCK_12); gnlProkkaNGBDEFCK_13 (original name was: gnl|Prokka|NGBDEFCK_13); gnlProkkaNGBDEFCK_14 (original name was: gnl|Prokka|NGBDEFCK_14); gnlProkkaNGBDEFCK_15 (original name was: gnl|Prokka|NGBDEFCK_15); gnlProkkaNGBDEFCK_16 (original name was: gnl|Prokka|NGBDEFCK_16); gnlProkkaNGBDEFCK_17 (original name was: gnl|Prokka|NGBDEFCK_17); gnlProkkaNGBDEFCK_18 (original name was: gnl|Prokka|NGBDEFCK_18); gnlProkkaNGBDEFCK_19 (original name was: gnl|Prokka|NGBDEFCK_19); gnlProkkaNGBDEFCK_20 (original name was: gnl|Prokka|NGBDEFCK_20); gnlProkkaNGBDEFCK_21 (original name was: gnl|Prokka|NGBDEFCK_21); gnlProkkaNGBDEFCK_22 (original name was: gnl|Prokka|NGBDEFCK_22); gnlProkkaNGBDEFCK_24 (original name was: gnl|Prokka|NGBDEFCK_24); gnlProkkaNGBDEFCK_25 (original name was: gnl|Prokka|NGBDEFCK_25); gnlProkkaNGBDEFCK_26 (original name was: gnl|Prokka|NGBDEFCK_26); gnlProkkaNGBDEFCK_28 (original name was: gnl|Prokka|NGBDEFCK_28); gnlProkkaNGBDEFCK_29 (original name was: gnl|Prokka|NGBDEFCK_29); gnlProkkaNGBDEFCK_31 (original name was: gnl|Prokka|NGBDEFCK_31); gnlProkkaNGBDEFCK_32 (original name was: gnl|Prokka|NGBDEFCK_32); gnlProkkaNGBDEFCK_33 (original name was: gnl|Prokka|NGBDEFCK_33); gnlProkkaNGBDEFCK_34 (original name was: gnl|Prokka|NGBDEFCK_34); gnlProkkaNGBDEFCK_35 (original name was: gnl|Prokka|NGBDEFCK_35); gnlProkkaNGBDEFCK_36 (original name was: gnl|Prokka|NGBDEFCK_36); gnlProkkaNGBDEFCK_37 (original name was: gnl|Prokka|NGBDEFCK_37); gnlProkkaNGBDEFCK_38 (original name was: gnl|Prokka|NGBDEFCK_38); gnlProkkaNGBDEFCK_39 (original name was: gnl|Prokka|NGBDEFCK_39); gnlProkkaNGBDEFCK_40 (original name was: gnl|Prokka|NGBDEFCK_40); gnlProkkaNGBDEFCK_41 (original name was: gnl|Prokka|NGBDEFCK_41); gnlProkkaNGBDEFCK_42 (original name was: gnl|Prokka|NGBDEFCK_42); gnlProkkaNGBDEFCK_43 (original name was: gnl|Prokka|NGBDEFCK_43); gnlProkkaNGBDEFCK_44 (original name was: gnl|Prokka|NGBDEFCK_44); gnlProkkaNGBDEFCK_45 (original name was: gnl|Prokka|NGBDEFCK_45); gnlProkkaNGBDEFCK_46 (original name was: gnl|Prokka|NGBDEFCK_46); gnlProkkaNGBDEFCK_47 (original name was: gnl|Prokka|NGBDEFCK_47); gnlProkkaNGBDEFCK_48 (original name was: gnl|Prokka|NGBDEFCK_48); gnlProkkaNGBDEFCK_49 (original name was: gnl|Prokka|NGBDEFCK_49); gnlProkkaNGBDEFCK_50 (original name was: gnl|Prokka|NGBDEFCK_50); gnlProkkaNGBDEFCK_51 (original name was: gnl|Prokka|NGBDEFCK_51); gnlProkkaNGBDEFCK_52 (original name was: gnl|Prokka|NGBDEFCK_52); gnlProkkaNGBDEFCK_53 (original name was: gnl|Prokka|NGBDEFCK_53); gnlProkkaNGBDEFCK_54 (original name was: gnl|Prokka|NGBDEFCK_54); gnlProkkaNGBDEFCK_55 (original name was: gnl|Prokka|NGBDEFCK_55); gnlProkkaNGBDEFCK_56 (original name was: gnl|Prokka|NGBDEFCK_56); gnlProkkaNGBDEFCK_57 (original name was: gnl|Prokka|NGBDEFCK_57); gnlProkkaNGBDEFCK_58 (original name was: gnl|Prokka|NGBDEFCK_58); gnlProkkaNGBDEFCK_59 (original name was: gnl|Prokka|NGBDEFCK_59); gnlProkkaNGBDEFCK_60 (original name was: gnl|Prokka|NGBDEFCK_60); gnlProkkaNGBDEFCK_61 (original name was: gnl|Prokka|NGBDEFCK_61); gnlProkkaNGBDEFCK_62 (original name was: gnl|Prokka|NGBDEFCK_62); gnlProkkaNGBDEFCK_63 (original name was: gnl|Prokka|NGBDEFCK_63); gnlProkkaNGBDEFCK_64 (original name was: gnl|Prokka|NGBDEFCK_64); gnlProkkaNGBDEFCK_65 (original name was: gnl|Prokka|NGBDEFCK_65); gnlProkkaNGBDEFCK_66 (original name was: gnl|Prokka|NGBDEFCK_66); gnlProkkaNGBDEFCK_67 (original name was: gnl|Prokka|NGBDEFCK_67); gnlProkkaNGBDEFCK_68 (original name was: gnl|Prokka|NGBDEFCK_68); gnlProkkaNGBDEFCK_69 (original name was: gnl|Prokka|NGBDEFCK_69)

Compact view

gnlProkkaNGBDEFCK_6 - Region 1 - T3PKS

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Location: 29,613 - 70,782 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGBDEFCK_23 - Region 1 - terpene

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Location: 24,727 - 45,608 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGBDEFCK_27 - Region 1 - RiPP-like

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Location: 29,106 - 38,021 nt. (total: 8,916 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGBDEFCK_30 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,076 - 30,827 nt. (total: 16,752 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.