GCA_004300945.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFACHHGKD_6 (original name was: gnl|Prokka|FACHHGKD_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	T3PKS	29,996	71,165

gnlProkkaFACHHGKD_22 (original name was: gnl|Prokka|FACHHGKD_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	terpene	7,816	28,697

gnlProkkaFACHHGKD_26 (original name was: gnl|Prokka|FACHHGKD_26)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	RiPP-like	29,106	38,021

gnlProkkaFACHHGKD_29 (original name was: gnl|Prokka|FACHHGKD_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	cyclic-lactone-autoinducer	1	16,752

Region	Type	From	To	Similarity
Region 6.1	T3PKS	29,996	71,165
Region 22.1	terpene	7,816	28,697
Region 26.1	RiPP-like	29,106	38,021
Region 29.1	cyclic-lactone-autoinducer	1	16,752

No secondary metabolite regions were found in these records:: gnlProkkaFACHHGKD_1 (original name was: gnl|Prokka|FACHHGKD_1); gnlProkkaFACHHGKD_2 (original name was: gnl|Prokka|FACHHGKD_2); gnlProkkaFACHHGKD_3 (original name was: gnl|Prokka|FACHHGKD_3); gnlProkkaFACHHGKD_4 (original name was: gnl|Prokka|FACHHGKD_4); gnlProkkaFACHHGKD_5 (original name was: gnl|Prokka|FACHHGKD_5); gnlProkkaFACHHGKD_7 (original name was: gnl|Prokka|FACHHGKD_7); gnlProkkaFACHHGKD_8 (original name was: gnl|Prokka|FACHHGKD_8); gnlProkkaFACHHGKD_9 (original name was: gnl|Prokka|FACHHGKD_9); gnlProkkaFACHHGKD_10 (original name was: gnl|Prokka|FACHHGKD_10); gnlProkkaFACHHGKD_11 (original name was: gnl|Prokka|FACHHGKD_11); gnlProkkaFACHHGKD_12 (original name was: gnl|Prokka|FACHHGKD_12); gnlProkkaFACHHGKD_13 (original name was: gnl|Prokka|FACHHGKD_13); gnlProkkaFACHHGKD_14 (original name was: gnl|Prokka|FACHHGKD_14); gnlProkkaFACHHGKD_15 (original name was: gnl|Prokka|FACHHGKD_15); gnlProkkaFACHHGKD_16 (original name was: gnl|Prokka|FACHHGKD_16); gnlProkkaFACHHGKD_17 (original name was: gnl|Prokka|FACHHGKD_17); gnlProkkaFACHHGKD_18 (original name was: gnl|Prokka|FACHHGKD_18); gnlProkkaFACHHGKD_19 (original name was: gnl|Prokka|FACHHGKD_19); gnlProkkaFACHHGKD_20 (original name was: gnl|Prokka|FACHHGKD_20); gnlProkkaFACHHGKD_21 (original name was: gnl|Prokka|FACHHGKD_21); gnlProkkaFACHHGKD_23 (original name was: gnl|Prokka|FACHHGKD_23); gnlProkkaFACHHGKD_24 (original name was: gnl|Prokka|FACHHGKD_24); gnlProkkaFACHHGKD_25 (original name was: gnl|Prokka|FACHHGKD_25); gnlProkkaFACHHGKD_27 (original name was: gnl|Prokka|FACHHGKD_27); gnlProkkaFACHHGKD_28 (original name was: gnl|Prokka|FACHHGKD_28); gnlProkkaFACHHGKD_30 (original name was: gnl|Prokka|FACHHGKD_30); gnlProkkaFACHHGKD_31 (original name was: gnl|Prokka|FACHHGKD_31); gnlProkkaFACHHGKD_32 (original name was: gnl|Prokka|FACHHGKD_32); gnlProkkaFACHHGKD_33 (original name was: gnl|Prokka|FACHHGKD_33); gnlProkkaFACHHGKD_34 (original name was: gnl|Prokka|FACHHGKD_34); gnlProkkaFACHHGKD_35 (original name was: gnl|Prokka|FACHHGKD_35); gnlProkkaFACHHGKD_36 (original name was: gnl|Prokka|FACHHGKD_36); gnlProkkaFACHHGKD_37 (original name was: gnl|Prokka|FACHHGKD_37); gnlProkkaFACHHGKD_38 (original name was: gnl|Prokka|FACHHGKD_38); gnlProkkaFACHHGKD_39 (original name was: gnl|Prokka|FACHHGKD_39); gnlProkkaFACHHGKD_40 (original name was: gnl|Prokka|FACHHGKD_40); gnlProkkaFACHHGKD_41 (original name was: gnl|Prokka|FACHHGKD_41); gnlProkkaFACHHGKD_42 (original name was: gnl|Prokka|FACHHGKD_42); gnlProkkaFACHHGKD_43 (original name was: gnl|Prokka|FACHHGKD_43); gnlProkkaFACHHGKD_44 (original name was: gnl|Prokka|FACHHGKD_44); gnlProkkaFACHHGKD_45 (original name was: gnl|Prokka|FACHHGKD_45); gnlProkkaFACHHGKD_46 (original name was: gnl|Prokka|FACHHGKD_46); gnlProkkaFACHHGKD_47 (original name was: gnl|Prokka|FACHHGKD_47); gnlProkkaFACHHGKD_48 (original name was: gnl|Prokka|FACHHGKD_48); gnlProkkaFACHHGKD_49 (original name was: gnl|Prokka|FACHHGKD_49); gnlProkkaFACHHGKD_50 (original name was: gnl|Prokka|FACHHGKD_50); gnlProkkaFACHHGKD_51 (original name was: gnl|Prokka|FACHHGKD_51); gnlProkkaFACHHGKD_52 (original name was: gnl|Prokka|FACHHGKD_52); gnlProkkaFACHHGKD_53 (original name was: gnl|Prokka|FACHHGKD_53); gnlProkkaFACHHGKD_54 (original name was: gnl|Prokka|FACHHGKD_54); gnlProkkaFACHHGKD_55 (original name was: gnl|Prokka|FACHHGKD_55); gnlProkkaFACHHGKD_56 (original name was: gnl|Prokka|FACHHGKD_56); gnlProkkaFACHHGKD_57 (original name was: gnl|Prokka|FACHHGKD_57); gnlProkkaFACHHGKD_58 (original name was: gnl|Prokka|FACHHGKD_58); gnlProkkaFACHHGKD_59 (original name was: gnl|Prokka|FACHHGKD_59); gnlProkkaFACHHGKD_60 (original name was: gnl|Prokka|FACHHGKD_60); gnlProkkaFACHHGKD_61 (original name was: gnl|Prokka|FACHHGKD_61); gnlProkkaFACHHGKD_62 (original name was: gnl|Prokka|FACHHGKD_62); gnlProkkaFACHHGKD_63 (original name was: gnl|Prokka|FACHHGKD_63); gnlProkkaFACHHGKD_64 (original name was: gnl|Prokka|FACHHGKD_64); gnlProkkaFACHHGKD_65 (original name was: gnl|Prokka|FACHHGKD_65); gnlProkkaFACHHGKD_66 (original name was: gnl|Prokka|FACHHGKD_66); gnlProkkaFACHHGKD_67 (original name was: gnl|Prokka|FACHHGKD_67); gnlProkkaFACHHGKD_68 (original name was: gnl|Prokka|FACHHGKD_68); gnlProkkaFACHHGKD_69 (original name was: gnl|Prokka|FACHHGKD_69); gnlProkkaFACHHGKD_70 (original name was: gnl|Prokka|FACHHGKD_70); gnlProkkaFACHHGKD_71 (original name was: gnl|Prokka|FACHHGKD_71)

Compact view

gnlProkkaFACHHGKD_6 - Region 1 - T3PKS

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Location: 29,996 - 71,165 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFACHHGKD_22 - Region 1 - terpene

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Location: 7,816 - 28,697 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFACHHGKD_26 - Region 1 - RiPP-like

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Location: 29,106 - 38,021 nt. (total: 8,916 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFACHHGKD_29 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 16,752 nt. (total: 16,752 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.