GCA_004301055.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHDDNOHNL_8 (original name was: gnl|Prokka|HDDNOHNL_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	1	30,845

gnlProkkaHDDNOHNL_20 (original name was: gnl|Prokka|HDDNOHNL_20)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	terpene	24,727	45,608

gnlProkkaHDDNOHNL_25 (original name was: gnl|Prokka|HDDNOHNL_25)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	RiPP-like	29,106	38,021

gnlProkkaHDDNOHNL_30 (original name was: gnl|Prokka|HDDNOHNL_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	cyclic-lactone-autoinducer	1	16,752

Region	Type	From	To	Similarity
Region 8.1	T3PKS	1	30,845
Region 20.1	terpene	24,727	45,608
Region 25.1	RiPP-like	29,106	38,021
Region 30.1	cyclic-lactone-autoinducer	1	16,752

No secondary metabolite regions were found in these records:: gnlProkkaHDDNOHNL_1 (original name was: gnl|Prokka|HDDNOHNL_1); gnlProkkaHDDNOHNL_2 (original name was: gnl|Prokka|HDDNOHNL_2); gnlProkkaHDDNOHNL_3 (original name was: gnl|Prokka|HDDNOHNL_3); gnlProkkaHDDNOHNL_4 (original name was: gnl|Prokka|HDDNOHNL_4); gnlProkkaHDDNOHNL_5 (original name was: gnl|Prokka|HDDNOHNL_5); gnlProkkaHDDNOHNL_6 (original name was: gnl|Prokka|HDDNOHNL_6); gnlProkkaHDDNOHNL_7 (original name was: gnl|Prokka|HDDNOHNL_7); gnlProkkaHDDNOHNL_9 (original name was: gnl|Prokka|HDDNOHNL_9); gnlProkkaHDDNOHNL_10 (original name was: gnl|Prokka|HDDNOHNL_10); gnlProkkaHDDNOHNL_11 (original name was: gnl|Prokka|HDDNOHNL_11); gnlProkkaHDDNOHNL_12 (original name was: gnl|Prokka|HDDNOHNL_12); gnlProkkaHDDNOHNL_13 (original name was: gnl|Prokka|HDDNOHNL_13); gnlProkkaHDDNOHNL_14 (original name was: gnl|Prokka|HDDNOHNL_14); gnlProkkaHDDNOHNL_15 (original name was: gnl|Prokka|HDDNOHNL_15); gnlProkkaHDDNOHNL_16 (original name was: gnl|Prokka|HDDNOHNL_16); gnlProkkaHDDNOHNL_17 (original name was: gnl|Prokka|HDDNOHNL_17); gnlProkkaHDDNOHNL_18 (original name was: gnl|Prokka|HDDNOHNL_18); gnlProkkaHDDNOHNL_19 (original name was: gnl|Prokka|HDDNOHNL_19); gnlProkkaHDDNOHNL_21 (original name was: gnl|Prokka|HDDNOHNL_21); gnlProkkaHDDNOHNL_22 (original name was: gnl|Prokka|HDDNOHNL_22); gnlProkkaHDDNOHNL_23 (original name was: gnl|Prokka|HDDNOHNL_23); gnlProkkaHDDNOHNL_24 (original name was: gnl|Prokka|HDDNOHNL_24); gnlProkkaHDDNOHNL_26 (original name was: gnl|Prokka|HDDNOHNL_26); gnlProkkaHDDNOHNL_27 (original name was: gnl|Prokka|HDDNOHNL_27); gnlProkkaHDDNOHNL_28 (original name was: gnl|Prokka|HDDNOHNL_28); gnlProkkaHDDNOHNL_29 (original name was: gnl|Prokka|HDDNOHNL_29); gnlProkkaHDDNOHNL_31 (original name was: gnl|Prokka|HDDNOHNL_31); gnlProkkaHDDNOHNL_32 (original name was: gnl|Prokka|HDDNOHNL_32); gnlProkkaHDDNOHNL_33 (original name was: gnl|Prokka|HDDNOHNL_33); gnlProkkaHDDNOHNL_34 (original name was: gnl|Prokka|HDDNOHNL_34); gnlProkkaHDDNOHNL_35 (original name was: gnl|Prokka|HDDNOHNL_35); gnlProkkaHDDNOHNL_36 (original name was: gnl|Prokka|HDDNOHNL_36); gnlProkkaHDDNOHNL_37 (original name was: gnl|Prokka|HDDNOHNL_37); gnlProkkaHDDNOHNL_38 (original name was: gnl|Prokka|HDDNOHNL_38); gnlProkkaHDDNOHNL_39 (original name was: gnl|Prokka|HDDNOHNL_39); gnlProkkaHDDNOHNL_40 (original name was: gnl|Prokka|HDDNOHNL_40); gnlProkkaHDDNOHNL_41 (original name was: gnl|Prokka|HDDNOHNL_41); gnlProkkaHDDNOHNL_42 (original name was: gnl|Prokka|HDDNOHNL_42); gnlProkkaHDDNOHNL_43 (original name was: gnl|Prokka|HDDNOHNL_43); gnlProkkaHDDNOHNL_44 (original name was: gnl|Prokka|HDDNOHNL_44); gnlProkkaHDDNOHNL_45 (original name was: gnl|Prokka|HDDNOHNL_45); gnlProkkaHDDNOHNL_46 (original name was: gnl|Prokka|HDDNOHNL_46); gnlProkkaHDDNOHNL_47 (original name was: gnl|Prokka|HDDNOHNL_47); gnlProkkaHDDNOHNL_48 (original name was: gnl|Prokka|HDDNOHNL_48); gnlProkkaHDDNOHNL_49 (original name was: gnl|Prokka|HDDNOHNL_49); gnlProkkaHDDNOHNL_50 (original name was: gnl|Prokka|HDDNOHNL_50); gnlProkkaHDDNOHNL_51 (original name was: gnl|Prokka|HDDNOHNL_51); gnlProkkaHDDNOHNL_52 (original name was: gnl|Prokka|HDDNOHNL_52); gnlProkkaHDDNOHNL_53 (original name was: gnl|Prokka|HDDNOHNL_53); gnlProkkaHDDNOHNL_54 (original name was: gnl|Prokka|HDDNOHNL_54); gnlProkkaHDDNOHNL_55 (original name was: gnl|Prokka|HDDNOHNL_55); gnlProkkaHDDNOHNL_56 (original name was: gnl|Prokka|HDDNOHNL_56); gnlProkkaHDDNOHNL_57 (original name was: gnl|Prokka|HDDNOHNL_57); gnlProkkaHDDNOHNL_58 (original name was: gnl|Prokka|HDDNOHNL_58); gnlProkkaHDDNOHNL_59 (original name was: gnl|Prokka|HDDNOHNL_59); gnlProkkaHDDNOHNL_60 (original name was: gnl|Prokka|HDDNOHNL_60); gnlProkkaHDDNOHNL_61 (original name was: gnl|Prokka|HDDNOHNL_61); gnlProkkaHDDNOHNL_62 (original name was: gnl|Prokka|HDDNOHNL_62); gnlProkkaHDDNOHNL_63 (original name was: gnl|Prokka|HDDNOHNL_63); gnlProkkaHDDNOHNL_64 (original name was: gnl|Prokka|HDDNOHNL_64); gnlProkkaHDDNOHNL_65 (original name was: gnl|Prokka|HDDNOHNL_65); gnlProkkaHDDNOHNL_66 (original name was: gnl|Prokka|HDDNOHNL_66); gnlProkkaHDDNOHNL_67 (original name was: gnl|Prokka|HDDNOHNL_67); gnlProkkaHDDNOHNL_68 (original name was: gnl|Prokka|HDDNOHNL_68); gnlProkkaHDDNOHNL_69 (original name was: gnl|Prokka|HDDNOHNL_69); gnlProkkaHDDNOHNL_70 (original name was: gnl|Prokka|HDDNOHNL_70); gnlProkkaHDDNOHNL_71 (original name was: gnl|Prokka|HDDNOHNL_71); gnlProkkaHDDNOHNL_72 (original name was: gnl|Prokka|HDDNOHNL_72); gnlProkkaHDDNOHNL_73 (original name was: gnl|Prokka|HDDNOHNL_73); gnlProkkaHDDNOHNL_74 (original name was: gnl|Prokka|HDDNOHNL_74); gnlProkkaHDDNOHNL_75 (original name was: gnl|Prokka|HDDNOHNL_75); gnlProkkaHDDNOHNL_76 (original name was: gnl|Prokka|HDDNOHNL_76); gnlProkkaHDDNOHNL_77 (original name was: gnl|Prokka|HDDNOHNL_77); gnlProkkaHDDNOHNL_78 (original name was: gnl|Prokka|HDDNOHNL_78); gnlProkkaHDDNOHNL_79 (original name was: gnl|Prokka|HDDNOHNL_79); gnlProkkaHDDNOHNL_80 (original name was: gnl|Prokka|HDDNOHNL_80); gnlProkkaHDDNOHNL_81 (original name was: gnl|Prokka|HDDNOHNL_81); gnlProkkaHDDNOHNL_82 (original name was: gnl|Prokka|HDDNOHNL_82); gnlProkkaHDDNOHNL_83 (original name was: gnl|Prokka|HDDNOHNL_83); gnlProkkaHDDNOHNL_84 (original name was: gnl|Prokka|HDDNOHNL_84); gnlProkkaHDDNOHNL_85 (original name was: gnl|Prokka|HDDNOHNL_85)

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gnlProkkaHDDNOHNL_8 - Region 1 - T3PKS

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Location: 1 - 30,845 nt. (total: 30,845 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHDDNOHNL_20 - Region 1 - terpene

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Location: 24,727 - 45,608 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHDDNOHNL_25 - Region 1 - RiPP-like

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Location: 29,106 - 38,021 nt. (total: 8,916 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHDDNOHNL_30 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 16,752 nt. (total: 16,752 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.