GCA_004301225.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLPMGHCOJ_4 (original name was: gnl|Prokka|LPMGHCOJ_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	84,399	115,243

gnlProkkaLPMGHCOJ_21 (original name was: gnl|Prokka|LPMGHCOJ_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	terpene	7,816	28,697

gnlProkkaLPMGHCOJ_30 (original name was: gnl|Prokka|LPMGHCOJ_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	RiPP-like	28,904	37,819

gnlProkkaLPMGHCOJ_35 (original name was: gnl|Prokka|LPMGHCOJ_35)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	cyclic-lactone-autoinducer	14,076	30,827

Region	Type	From	To	Similarity
Region 4.1	T3PKS	84,399	115,243
Region 21.1	terpene	7,816	28,697
Region 30.1	RiPP-like	28,904	37,819
Region 35.1	cyclic-lactone-autoinducer	14,076	30,827

No secondary metabolite regions were found in these records:: gnlProkkaLPMGHCOJ_1 (original name was: gnl|Prokka|LPMGHCOJ_1); gnlProkkaLPMGHCOJ_2 (original name was: gnl|Prokka|LPMGHCOJ_2); gnlProkkaLPMGHCOJ_3 (original name was: gnl|Prokka|LPMGHCOJ_3); gnlProkkaLPMGHCOJ_5 (original name was: gnl|Prokka|LPMGHCOJ_5); gnlProkkaLPMGHCOJ_6 (original name was: gnl|Prokka|LPMGHCOJ_6); gnlProkkaLPMGHCOJ_7 (original name was: gnl|Prokka|LPMGHCOJ_7); gnlProkkaLPMGHCOJ_8 (original name was: gnl|Prokka|LPMGHCOJ_8); gnlProkkaLPMGHCOJ_9 (original name was: gnl|Prokka|LPMGHCOJ_9); gnlProkkaLPMGHCOJ_10 (original name was: gnl|Prokka|LPMGHCOJ_10); gnlProkkaLPMGHCOJ_11 (original name was: gnl|Prokka|LPMGHCOJ_11); gnlProkkaLPMGHCOJ_12 (original name was: gnl|Prokka|LPMGHCOJ_12); gnlProkkaLPMGHCOJ_13 (original name was: gnl|Prokka|LPMGHCOJ_13); gnlProkkaLPMGHCOJ_14 (original name was: gnl|Prokka|LPMGHCOJ_14); gnlProkkaLPMGHCOJ_15 (original name was: gnl|Prokka|LPMGHCOJ_15); gnlProkkaLPMGHCOJ_16 (original name was: gnl|Prokka|LPMGHCOJ_16); gnlProkkaLPMGHCOJ_17 (original name was: gnl|Prokka|LPMGHCOJ_17); gnlProkkaLPMGHCOJ_18 (original name was: gnl|Prokka|LPMGHCOJ_18); gnlProkkaLPMGHCOJ_19 (original name was: gnl|Prokka|LPMGHCOJ_19); gnlProkkaLPMGHCOJ_20 (original name was: gnl|Prokka|LPMGHCOJ_20); gnlProkkaLPMGHCOJ_22 (original name was: gnl|Prokka|LPMGHCOJ_22); gnlProkkaLPMGHCOJ_23 (original name was: gnl|Prokka|LPMGHCOJ_23); gnlProkkaLPMGHCOJ_24 (original name was: gnl|Prokka|LPMGHCOJ_24); gnlProkkaLPMGHCOJ_25 (original name was: gnl|Prokka|LPMGHCOJ_25); gnlProkkaLPMGHCOJ_26 (original name was: gnl|Prokka|LPMGHCOJ_26); gnlProkkaLPMGHCOJ_27 (original name was: gnl|Prokka|LPMGHCOJ_27); gnlProkkaLPMGHCOJ_28 (original name was: gnl|Prokka|LPMGHCOJ_28); gnlProkkaLPMGHCOJ_29 (original name was: gnl|Prokka|LPMGHCOJ_29); gnlProkkaLPMGHCOJ_31 (original name was: gnl|Prokka|LPMGHCOJ_31); gnlProkkaLPMGHCOJ_32 (original name was: gnl|Prokka|LPMGHCOJ_32); gnlProkkaLPMGHCOJ_33 (original name was: gnl|Prokka|LPMGHCOJ_33); gnlProkkaLPMGHCOJ_34 (original name was: gnl|Prokka|LPMGHCOJ_34); gnlProkkaLPMGHCOJ_36 (original name was: gnl|Prokka|LPMGHCOJ_36); gnlProkkaLPMGHCOJ_37 (original name was: gnl|Prokka|LPMGHCOJ_37); gnlProkkaLPMGHCOJ_38 (original name was: gnl|Prokka|LPMGHCOJ_38); gnlProkkaLPMGHCOJ_39 (original name was: gnl|Prokka|LPMGHCOJ_39); gnlProkkaLPMGHCOJ_40 (original name was: gnl|Prokka|LPMGHCOJ_40); gnlProkkaLPMGHCOJ_41 (original name was: gnl|Prokka|LPMGHCOJ_41); gnlProkkaLPMGHCOJ_42 (original name was: gnl|Prokka|LPMGHCOJ_42); gnlProkkaLPMGHCOJ_43 (original name was: gnl|Prokka|LPMGHCOJ_43); gnlProkkaLPMGHCOJ_44 (original name was: gnl|Prokka|LPMGHCOJ_44); gnlProkkaLPMGHCOJ_45 (original name was: gnl|Prokka|LPMGHCOJ_45); gnlProkkaLPMGHCOJ_46 (original name was: gnl|Prokka|LPMGHCOJ_46); gnlProkkaLPMGHCOJ_47 (original name was: gnl|Prokka|LPMGHCOJ_47); gnlProkkaLPMGHCOJ_48 (original name was: gnl|Prokka|LPMGHCOJ_48); gnlProkkaLPMGHCOJ_49 (original name was: gnl|Prokka|LPMGHCOJ_49); gnlProkkaLPMGHCOJ_50 (original name was: gnl|Prokka|LPMGHCOJ_50); gnlProkkaLPMGHCOJ_51 (original name was: gnl|Prokka|LPMGHCOJ_51); gnlProkkaLPMGHCOJ_52 (original name was: gnl|Prokka|LPMGHCOJ_52); gnlProkkaLPMGHCOJ_53 (original name was: gnl|Prokka|LPMGHCOJ_53); gnlProkkaLPMGHCOJ_54 (original name was: gnl|Prokka|LPMGHCOJ_54); gnlProkkaLPMGHCOJ_55 (original name was: gnl|Prokka|LPMGHCOJ_55); gnlProkkaLPMGHCOJ_56 (original name was: gnl|Prokka|LPMGHCOJ_56); gnlProkkaLPMGHCOJ_57 (original name was: gnl|Prokka|LPMGHCOJ_57); gnlProkkaLPMGHCOJ_58 (original name was: gnl|Prokka|LPMGHCOJ_58); gnlProkkaLPMGHCOJ_59 (original name was: gnl|Prokka|LPMGHCOJ_59); gnlProkkaLPMGHCOJ_60 (original name was: gnl|Prokka|LPMGHCOJ_60); gnlProkkaLPMGHCOJ_61 (original name was: gnl|Prokka|LPMGHCOJ_61); gnlProkkaLPMGHCOJ_62 (original name was: gnl|Prokka|LPMGHCOJ_62); gnlProkkaLPMGHCOJ_63 (original name was: gnl|Prokka|LPMGHCOJ_63); gnlProkkaLPMGHCOJ_64 (original name was: gnl|Prokka|LPMGHCOJ_64); gnlProkkaLPMGHCOJ_65 (original name was: gnl|Prokka|LPMGHCOJ_65); gnlProkkaLPMGHCOJ_66 (original name was: gnl|Prokka|LPMGHCOJ_66); gnlProkkaLPMGHCOJ_67 (original name was: gnl|Prokka|LPMGHCOJ_67); gnlProkkaLPMGHCOJ_68 (original name was: gnl|Prokka|LPMGHCOJ_68); gnlProkkaLPMGHCOJ_69 (original name was: gnl|Prokka|LPMGHCOJ_69); gnlProkkaLPMGHCOJ_70 (original name was: gnl|Prokka|LPMGHCOJ_70); gnlProkkaLPMGHCOJ_71 (original name was: gnl|Prokka|LPMGHCOJ_71); gnlProkkaLPMGHCOJ_72 (original name was: gnl|Prokka|LPMGHCOJ_72); gnlProkkaLPMGHCOJ_73 (original name was: gnl|Prokka|LPMGHCOJ_73); gnlProkkaLPMGHCOJ_74 (original name was: gnl|Prokka|LPMGHCOJ_74); gnlProkkaLPMGHCOJ_75 (original name was: gnl|Prokka|LPMGHCOJ_75); gnlProkkaLPMGHCOJ_76 (original name was: gnl|Prokka|LPMGHCOJ_76); gnlProkkaLPMGHCOJ_77 (original name was: gnl|Prokka|LPMGHCOJ_77); gnlProkkaLPMGHCOJ_78 (original name was: gnl|Prokka|LPMGHCOJ_78); gnlProkkaLPMGHCOJ_79 (original name was: gnl|Prokka|LPMGHCOJ_79); gnlProkkaLPMGHCOJ_80 (original name was: gnl|Prokka|LPMGHCOJ_80); gnlProkkaLPMGHCOJ_81 (original name was: gnl|Prokka|LPMGHCOJ_81); gnlProkkaLPMGHCOJ_82 (original name was: gnl|Prokka|LPMGHCOJ_82); gnlProkkaLPMGHCOJ_83 (original name was: gnl|Prokka|LPMGHCOJ_83); gnlProkkaLPMGHCOJ_84 (original name was: gnl|Prokka|LPMGHCOJ_84); gnlProkkaLPMGHCOJ_85 (original name was: gnl|Prokka|LPMGHCOJ_85); gnlProkkaLPMGHCOJ_86 (original name was: gnl|Prokka|LPMGHCOJ_86); gnlProkkaLPMGHCOJ_87 (original name was: gnl|Prokka|LPMGHCOJ_87); gnlProkkaLPMGHCOJ_88 (original name was: gnl|Prokka|LPMGHCOJ_88); gnlProkkaLPMGHCOJ_89 (original name was: gnl|Prokka|LPMGHCOJ_89); gnlProkkaLPMGHCOJ_90 (original name was: gnl|Prokka|LPMGHCOJ_90); gnlProkkaLPMGHCOJ_91 (original name was: gnl|Prokka|LPMGHCOJ_91); gnlProkkaLPMGHCOJ_92 (original name was: gnl|Prokka|LPMGHCOJ_92); gnlProkkaLPMGHCOJ_93 (original name was: gnl|Prokka|LPMGHCOJ_93); gnlProkkaLPMGHCOJ_94 (original name was: gnl|Prokka|LPMGHCOJ_94); gnlProkkaLPMGHCOJ_95 (original name was: gnl|Prokka|LPMGHCOJ_95); gnlProkkaLPMGHCOJ_96 (original name was: gnl|Prokka|LPMGHCOJ_96); gnlProkkaLPMGHCOJ_97 (original name was: gnl|Prokka|LPMGHCOJ_97); gnlProkkaLPMGHCOJ_98 (original name was: gnl|Prokka|LPMGHCOJ_98); gnlProkkaLPMGHCOJ_99 (original name was: gnl|Prokka|LPMGHCOJ_99); gnlProkkaLPMGHCOJ_100 (original name was: gnl|Prokka|LPMGHCOJ_100); gnlProkkaLPMGHCOJ_101 (original name was: gnl|Prokka|LPMGHCOJ_101); gnlProkkaLPMGHCOJ_102 (original name was: gnl|Prokka|LPMGHCOJ_102)

Compact view

gnlProkkaLPMGHCOJ_4 - Region 1 - T3PKS

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Location: 84,399 - 115,243 nt. (total: 30,845 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLPMGHCOJ_21 - Region 1 - terpene

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Location: 7,816 - 28,697 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLPMGHCOJ_30 - Region 1 - RiPP-like

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Location: 28,904 - 37,819 nt. (total: 8,916 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLPMGHCOJ_35 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,076 - 30,827 nt. (total: 16,752 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.