GCA_004301245.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKBCHOEPC_8 (original name was: gnl|Prokka|KBCHOEPC_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	84,399	115,243

gnlProkkaKBCHOEPC_21 (original name was: gnl|Prokka|KBCHOEPC_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	terpene	7,816	28,697

gnlProkkaKBCHOEPC_26 (original name was: gnl|Prokka|KBCHOEPC_26)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	RiPP-like	28,904	37,819

gnlProkkaKBCHOEPC_29 (original name was: gnl|Prokka|KBCHOEPC_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	cyclic-lactone-autoinducer	14,076	30,827

Region	Type	From	To	Similarity
Region 8.1	T3PKS	84,399	115,243
Region 21.1	terpene	7,816	28,697
Region 26.1	RiPP-like	28,904	37,819
Region 29.1	cyclic-lactone-autoinducer	14,076	30,827

No secondary metabolite regions were found in these records:: gnlProkkaKBCHOEPC_1 (original name was: gnl|Prokka|KBCHOEPC_1); gnlProkkaKBCHOEPC_2 (original name was: gnl|Prokka|KBCHOEPC_2); gnlProkkaKBCHOEPC_3 (original name was: gnl|Prokka|KBCHOEPC_3); gnlProkkaKBCHOEPC_4 (original name was: gnl|Prokka|KBCHOEPC_4); gnlProkkaKBCHOEPC_5 (original name was: gnl|Prokka|KBCHOEPC_5); gnlProkkaKBCHOEPC_6 (original name was: gnl|Prokka|KBCHOEPC_6); gnlProkkaKBCHOEPC_7 (original name was: gnl|Prokka|KBCHOEPC_7); gnlProkkaKBCHOEPC_9 (original name was: gnl|Prokka|KBCHOEPC_9); gnlProkkaKBCHOEPC_10 (original name was: gnl|Prokka|KBCHOEPC_10); gnlProkkaKBCHOEPC_11 (original name was: gnl|Prokka|KBCHOEPC_11); gnlProkkaKBCHOEPC_12 (original name was: gnl|Prokka|KBCHOEPC_12); gnlProkkaKBCHOEPC_13 (original name was: gnl|Prokka|KBCHOEPC_13); gnlProkkaKBCHOEPC_14 (original name was: gnl|Prokka|KBCHOEPC_14); gnlProkkaKBCHOEPC_15 (original name was: gnl|Prokka|KBCHOEPC_15); gnlProkkaKBCHOEPC_16 (original name was: gnl|Prokka|KBCHOEPC_16); gnlProkkaKBCHOEPC_17 (original name was: gnl|Prokka|KBCHOEPC_17); gnlProkkaKBCHOEPC_18 (original name was: gnl|Prokka|KBCHOEPC_18); gnlProkkaKBCHOEPC_19 (original name was: gnl|Prokka|KBCHOEPC_19); gnlProkkaKBCHOEPC_20 (original name was: gnl|Prokka|KBCHOEPC_20); gnlProkkaKBCHOEPC_22 (original name was: gnl|Prokka|KBCHOEPC_22); gnlProkkaKBCHOEPC_23 (original name was: gnl|Prokka|KBCHOEPC_23); gnlProkkaKBCHOEPC_24 (original name was: gnl|Prokka|KBCHOEPC_24); gnlProkkaKBCHOEPC_25 (original name was: gnl|Prokka|KBCHOEPC_25); gnlProkkaKBCHOEPC_27 (original name was: gnl|Prokka|KBCHOEPC_27); gnlProkkaKBCHOEPC_28 (original name was: gnl|Prokka|KBCHOEPC_28); gnlProkkaKBCHOEPC_30 (original name was: gnl|Prokka|KBCHOEPC_30); gnlProkkaKBCHOEPC_31 (original name was: gnl|Prokka|KBCHOEPC_31); gnlProkkaKBCHOEPC_32 (original name was: gnl|Prokka|KBCHOEPC_32); gnlProkkaKBCHOEPC_33 (original name was: gnl|Prokka|KBCHOEPC_33); gnlProkkaKBCHOEPC_34 (original name was: gnl|Prokka|KBCHOEPC_34); gnlProkkaKBCHOEPC_35 (original name was: gnl|Prokka|KBCHOEPC_35); gnlProkkaKBCHOEPC_36 (original name was: gnl|Prokka|KBCHOEPC_36); gnlProkkaKBCHOEPC_37 (original name was: gnl|Prokka|KBCHOEPC_37); gnlProkkaKBCHOEPC_38 (original name was: gnl|Prokka|KBCHOEPC_38); gnlProkkaKBCHOEPC_39 (original name was: gnl|Prokka|KBCHOEPC_39); gnlProkkaKBCHOEPC_40 (original name was: gnl|Prokka|KBCHOEPC_40); gnlProkkaKBCHOEPC_41 (original name was: gnl|Prokka|KBCHOEPC_41); gnlProkkaKBCHOEPC_42 (original name was: gnl|Prokka|KBCHOEPC_42); gnlProkkaKBCHOEPC_43 (original name was: gnl|Prokka|KBCHOEPC_43); gnlProkkaKBCHOEPC_44 (original name was: gnl|Prokka|KBCHOEPC_44); gnlProkkaKBCHOEPC_45 (original name was: gnl|Prokka|KBCHOEPC_45); gnlProkkaKBCHOEPC_46 (original name was: gnl|Prokka|KBCHOEPC_46); gnlProkkaKBCHOEPC_47 (original name was: gnl|Prokka|KBCHOEPC_47); gnlProkkaKBCHOEPC_48 (original name was: gnl|Prokka|KBCHOEPC_48); gnlProkkaKBCHOEPC_49 (original name was: gnl|Prokka|KBCHOEPC_49); gnlProkkaKBCHOEPC_50 (original name was: gnl|Prokka|KBCHOEPC_50); gnlProkkaKBCHOEPC_51 (original name was: gnl|Prokka|KBCHOEPC_51); gnlProkkaKBCHOEPC_52 (original name was: gnl|Prokka|KBCHOEPC_52); gnlProkkaKBCHOEPC_53 (original name was: gnl|Prokka|KBCHOEPC_53); gnlProkkaKBCHOEPC_54 (original name was: gnl|Prokka|KBCHOEPC_54); gnlProkkaKBCHOEPC_55 (original name was: gnl|Prokka|KBCHOEPC_55); gnlProkkaKBCHOEPC_56 (original name was: gnl|Prokka|KBCHOEPC_56); gnlProkkaKBCHOEPC_57 (original name was: gnl|Prokka|KBCHOEPC_57); gnlProkkaKBCHOEPC_58 (original name was: gnl|Prokka|KBCHOEPC_58); gnlProkkaKBCHOEPC_59 (original name was: gnl|Prokka|KBCHOEPC_59); gnlProkkaKBCHOEPC_60 (original name was: gnl|Prokka|KBCHOEPC_60); gnlProkkaKBCHOEPC_61 (original name was: gnl|Prokka|KBCHOEPC_61); gnlProkkaKBCHOEPC_62 (original name was: gnl|Prokka|KBCHOEPC_62); gnlProkkaKBCHOEPC_63 (original name was: gnl|Prokka|KBCHOEPC_63); gnlProkkaKBCHOEPC_64 (original name was: gnl|Prokka|KBCHOEPC_64); gnlProkkaKBCHOEPC_65 (original name was: gnl|Prokka|KBCHOEPC_65); gnlProkkaKBCHOEPC_66 (original name was: gnl|Prokka|KBCHOEPC_66); gnlProkkaKBCHOEPC_67 (original name was: gnl|Prokka|KBCHOEPC_67); gnlProkkaKBCHOEPC_68 (original name was: gnl|Prokka|KBCHOEPC_68); gnlProkkaKBCHOEPC_69 (original name was: gnl|Prokka|KBCHOEPC_69); gnlProkkaKBCHOEPC_70 (original name was: gnl|Prokka|KBCHOEPC_70); gnlProkkaKBCHOEPC_71 (original name was: gnl|Prokka|KBCHOEPC_71); gnlProkkaKBCHOEPC_72 (original name was: gnl|Prokka|KBCHOEPC_72); gnlProkkaKBCHOEPC_73 (original name was: gnl|Prokka|KBCHOEPC_73); gnlProkkaKBCHOEPC_74 (original name was: gnl|Prokka|KBCHOEPC_74); gnlProkkaKBCHOEPC_75 (original name was: gnl|Prokka|KBCHOEPC_75); gnlProkkaKBCHOEPC_76 (original name was: gnl|Prokka|KBCHOEPC_76); gnlProkkaKBCHOEPC_77 (original name was: gnl|Prokka|KBCHOEPC_77); gnlProkkaKBCHOEPC_78 (original name was: gnl|Prokka|KBCHOEPC_78); gnlProkkaKBCHOEPC_79 (original name was: gnl|Prokka|KBCHOEPC_79); gnlProkkaKBCHOEPC_80 (original name was: gnl|Prokka|KBCHOEPC_80); gnlProkkaKBCHOEPC_81 (original name was: gnl|Prokka|KBCHOEPC_81); gnlProkkaKBCHOEPC_82 (original name was: gnl|Prokka|KBCHOEPC_82); gnlProkkaKBCHOEPC_83 (original name was: gnl|Prokka|KBCHOEPC_83); gnlProkkaKBCHOEPC_84 (original name was: gnl|Prokka|KBCHOEPC_84); gnlProkkaKBCHOEPC_85 (original name was: gnl|Prokka|KBCHOEPC_85); gnlProkkaKBCHOEPC_86 (original name was: gnl|Prokka|KBCHOEPC_86); gnlProkkaKBCHOEPC_87 (original name was: gnl|Prokka|KBCHOEPC_87); gnlProkkaKBCHOEPC_88 (original name was: gnl|Prokka|KBCHOEPC_88)

Compact view

gnlProkkaKBCHOEPC_8 - Region 1 - T3PKS

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Location: 84,399 - 115,243 nt. (total: 30,845 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKBCHOEPC_21 - Region 1 - terpene

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Location: 7,816 - 28,697 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKBCHOEPC_26 - Region 1 - RiPP-like

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Location: 28,904 - 37,819 nt. (total: 8,916 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKBCHOEPC_29 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,076 - 30,827 nt. (total: 16,752 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.