GCA_004301325.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBCDAGKHO_8 (original name was: gnl|Prokka|BCDAGKHO_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	1	30,845

gnlProkkaBCDAGKHO_21 (original name was: gnl|Prokka|BCDAGKHO_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	terpene	24,727	45,608

gnlProkkaBCDAGKHO_26 (original name was: gnl|Prokka|BCDAGKHO_26)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	RiPP-like	28,904	37,819

gnlProkkaBCDAGKHO_30 (original name was: gnl|Prokka|BCDAGKHO_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	cyclic-lactone-autoinducer	14,076	30,827

Region	Type	From	To	Similarity
Region 8.1	T3PKS	1	30,845
Region 21.1	terpene	24,727	45,608
Region 26.1	RiPP-like	28,904	37,819
Region 30.1	cyclic-lactone-autoinducer	14,076	30,827

No secondary metabolite regions were found in these records:: gnlProkkaBCDAGKHO_1 (original name was: gnl|Prokka|BCDAGKHO_1); gnlProkkaBCDAGKHO_2 (original name was: gnl|Prokka|BCDAGKHO_2); gnlProkkaBCDAGKHO_3 (original name was: gnl|Prokka|BCDAGKHO_3); gnlProkkaBCDAGKHO_4 (original name was: gnl|Prokka|BCDAGKHO_4); gnlProkkaBCDAGKHO_5 (original name was: gnl|Prokka|BCDAGKHO_5); gnlProkkaBCDAGKHO_6 (original name was: gnl|Prokka|BCDAGKHO_6); gnlProkkaBCDAGKHO_7 (original name was: gnl|Prokka|BCDAGKHO_7); gnlProkkaBCDAGKHO_9 (original name was: gnl|Prokka|BCDAGKHO_9); gnlProkkaBCDAGKHO_10 (original name was: gnl|Prokka|BCDAGKHO_10); gnlProkkaBCDAGKHO_11 (original name was: gnl|Prokka|BCDAGKHO_11); gnlProkkaBCDAGKHO_12 (original name was: gnl|Prokka|BCDAGKHO_12); gnlProkkaBCDAGKHO_13 (original name was: gnl|Prokka|BCDAGKHO_13); gnlProkkaBCDAGKHO_14 (original name was: gnl|Prokka|BCDAGKHO_14); gnlProkkaBCDAGKHO_15 (original name was: gnl|Prokka|BCDAGKHO_15); gnlProkkaBCDAGKHO_16 (original name was: gnl|Prokka|BCDAGKHO_16); gnlProkkaBCDAGKHO_17 (original name was: gnl|Prokka|BCDAGKHO_17); gnlProkkaBCDAGKHO_18 (original name was: gnl|Prokka|BCDAGKHO_18); gnlProkkaBCDAGKHO_19 (original name was: gnl|Prokka|BCDAGKHO_19); gnlProkkaBCDAGKHO_20 (original name was: gnl|Prokka|BCDAGKHO_20); gnlProkkaBCDAGKHO_22 (original name was: gnl|Prokka|BCDAGKHO_22); gnlProkkaBCDAGKHO_23 (original name was: gnl|Prokka|BCDAGKHO_23); gnlProkkaBCDAGKHO_24 (original name was: gnl|Prokka|BCDAGKHO_24); gnlProkkaBCDAGKHO_25 (original name was: gnl|Prokka|BCDAGKHO_25); gnlProkkaBCDAGKHO_27 (original name was: gnl|Prokka|BCDAGKHO_27); gnlProkkaBCDAGKHO_28 (original name was: gnl|Prokka|BCDAGKHO_28); gnlProkkaBCDAGKHO_29 (original name was: gnl|Prokka|BCDAGKHO_29); gnlProkkaBCDAGKHO_31 (original name was: gnl|Prokka|BCDAGKHO_31); gnlProkkaBCDAGKHO_32 (original name was: gnl|Prokka|BCDAGKHO_32); gnlProkkaBCDAGKHO_33 (original name was: gnl|Prokka|BCDAGKHO_33); gnlProkkaBCDAGKHO_34 (original name was: gnl|Prokka|BCDAGKHO_34); gnlProkkaBCDAGKHO_35 (original name was: gnl|Prokka|BCDAGKHO_35); gnlProkkaBCDAGKHO_36 (original name was: gnl|Prokka|BCDAGKHO_36); gnlProkkaBCDAGKHO_37 (original name was: gnl|Prokka|BCDAGKHO_37); gnlProkkaBCDAGKHO_38 (original name was: gnl|Prokka|BCDAGKHO_38); gnlProkkaBCDAGKHO_39 (original name was: gnl|Prokka|BCDAGKHO_39); gnlProkkaBCDAGKHO_40 (original name was: gnl|Prokka|BCDAGKHO_40); gnlProkkaBCDAGKHO_41 (original name was: gnl|Prokka|BCDAGKHO_41); gnlProkkaBCDAGKHO_42 (original name was: gnl|Prokka|BCDAGKHO_42); gnlProkkaBCDAGKHO_43 (original name was: gnl|Prokka|BCDAGKHO_43); gnlProkkaBCDAGKHO_44 (original name was: gnl|Prokka|BCDAGKHO_44); gnlProkkaBCDAGKHO_45 (original name was: gnl|Prokka|BCDAGKHO_45); gnlProkkaBCDAGKHO_46 (original name was: gnl|Prokka|BCDAGKHO_46); gnlProkkaBCDAGKHO_47 (original name was: gnl|Prokka|BCDAGKHO_47); gnlProkkaBCDAGKHO_48 (original name was: gnl|Prokka|BCDAGKHO_48); gnlProkkaBCDAGKHO_49 (original name was: gnl|Prokka|BCDAGKHO_49); gnlProkkaBCDAGKHO_50 (original name was: gnl|Prokka|BCDAGKHO_50); gnlProkkaBCDAGKHO_51 (original name was: gnl|Prokka|BCDAGKHO_51); gnlProkkaBCDAGKHO_52 (original name was: gnl|Prokka|BCDAGKHO_52); gnlProkkaBCDAGKHO_53 (original name was: gnl|Prokka|BCDAGKHO_53); gnlProkkaBCDAGKHO_54 (original name was: gnl|Prokka|BCDAGKHO_54); gnlProkkaBCDAGKHO_55 (original name was: gnl|Prokka|BCDAGKHO_55); gnlProkkaBCDAGKHO_56 (original name was: gnl|Prokka|BCDAGKHO_56); gnlProkkaBCDAGKHO_57 (original name was: gnl|Prokka|BCDAGKHO_57); gnlProkkaBCDAGKHO_58 (original name was: gnl|Prokka|BCDAGKHO_58); gnlProkkaBCDAGKHO_59 (original name was: gnl|Prokka|BCDAGKHO_59); gnlProkkaBCDAGKHO_60 (original name was: gnl|Prokka|BCDAGKHO_60); gnlProkkaBCDAGKHO_61 (original name was: gnl|Prokka|BCDAGKHO_61); gnlProkkaBCDAGKHO_62 (original name was: gnl|Prokka|BCDAGKHO_62); gnlProkkaBCDAGKHO_63 (original name was: gnl|Prokka|BCDAGKHO_63); gnlProkkaBCDAGKHO_64 (original name was: gnl|Prokka|BCDAGKHO_64); gnlProkkaBCDAGKHO_65 (original name was: gnl|Prokka|BCDAGKHO_65); gnlProkkaBCDAGKHO_66 (original name was: gnl|Prokka|BCDAGKHO_66); gnlProkkaBCDAGKHO_67 (original name was: gnl|Prokka|BCDAGKHO_67); gnlProkkaBCDAGKHO_68 (original name was: gnl|Prokka|BCDAGKHO_68); gnlProkkaBCDAGKHO_69 (original name was: gnl|Prokka|BCDAGKHO_69); gnlProkkaBCDAGKHO_70 (original name was: gnl|Prokka|BCDAGKHO_70); gnlProkkaBCDAGKHO_71 (original name was: gnl|Prokka|BCDAGKHO_71); gnlProkkaBCDAGKHO_72 (original name was: gnl|Prokka|BCDAGKHO_72); gnlProkkaBCDAGKHO_73 (original name was: gnl|Prokka|BCDAGKHO_73); gnlProkkaBCDAGKHO_74 (original name was: gnl|Prokka|BCDAGKHO_74); gnlProkkaBCDAGKHO_75 (original name was: gnl|Prokka|BCDAGKHO_75); gnlProkkaBCDAGKHO_76 (original name was: gnl|Prokka|BCDAGKHO_76); gnlProkkaBCDAGKHO_77 (original name was: gnl|Prokka|BCDAGKHO_77); gnlProkkaBCDAGKHO_78 (original name was: gnl|Prokka|BCDAGKHO_78); gnlProkkaBCDAGKHO_79 (original name was: gnl|Prokka|BCDAGKHO_79); gnlProkkaBCDAGKHO_80 (original name was: gnl|Prokka|BCDAGKHO_80); gnlProkkaBCDAGKHO_81 (original name was: gnl|Prokka|BCDAGKHO_81); gnlProkkaBCDAGKHO_82 (original name was: gnl|Prokka|BCDAGKHO_82); gnlProkkaBCDAGKHO_83 (original name was: gnl|Prokka|BCDAGKHO_83); gnlProkkaBCDAGKHO_84 (original name was: gnl|Prokka|BCDAGKHO_84); gnlProkkaBCDAGKHO_85 (original name was: gnl|Prokka|BCDAGKHO_85); gnlProkkaBCDAGKHO_86 (original name was: gnl|Prokka|BCDAGKHO_86); gnlProkkaBCDAGKHO_87 (original name was: gnl|Prokka|BCDAGKHO_87); gnlProkkaBCDAGKHO_88 (original name was: gnl|Prokka|BCDAGKHO_88); gnlProkkaBCDAGKHO_89 (original name was: gnl|Prokka|BCDAGKHO_89); gnlProkkaBCDAGKHO_90 (original name was: gnl|Prokka|BCDAGKHO_90); gnlProkkaBCDAGKHO_91 (original name was: gnl|Prokka|BCDAGKHO_91); gnlProkkaBCDAGKHO_92 (original name was: gnl|Prokka|BCDAGKHO_92); gnlProkkaBCDAGKHO_93 (original name was: gnl|Prokka|BCDAGKHO_93); gnlProkkaBCDAGKHO_94 (original name was: gnl|Prokka|BCDAGKHO_94)

Compact view

gnlProkkaBCDAGKHO_8 - Region 1 - T3PKS

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Location: 1 - 30,845 nt. (total: 30,845 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBCDAGKHO_21 - Region 1 - terpene

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Location: 24,727 - 45,608 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBCDAGKHO_26 - Region 1 - RiPP-like

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Location: 28,904 - 37,819 nt. (total: 8,916 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBCDAGKHO_30 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,076 - 30,827 nt. (total: 16,752 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.