GCA_004301565.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHGDGAODK_8 (original name was: gnl|Prokka|HGDGAODK_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	1	30,839

gnlProkkaHGDGAODK_22 (original name was: gnl|Prokka|HGDGAODK_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	terpene	7,810	28,691

gnlProkkaHGDGAODK_28 (original name was: gnl|Prokka|HGDGAODK_28)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	RiPP-like	28,904	37,813

gnlProkkaHGDGAODK_31 (original name was: gnl|Prokka|HGDGAODK_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	cyclic-lactone-autoinducer	1	16,746

Region	Type	From	To	Similarity
Region 8.1	T3PKS	1	30,839
Region 22.1	terpene	7,810	28,691
Region 28.1	RiPP-like	28,904	37,813
Region 31.1	cyclic-lactone-autoinducer	1	16,746

No secondary metabolite regions were found in these records:: gnlProkkaHGDGAODK_1 (original name was: gnl|Prokka|HGDGAODK_1); gnlProkkaHGDGAODK_2 (original name was: gnl|Prokka|HGDGAODK_2); gnlProkkaHGDGAODK_3 (original name was: gnl|Prokka|HGDGAODK_3); gnlProkkaHGDGAODK_4 (original name was: gnl|Prokka|HGDGAODK_4); gnlProkkaHGDGAODK_5 (original name was: gnl|Prokka|HGDGAODK_5); gnlProkkaHGDGAODK_6 (original name was: gnl|Prokka|HGDGAODK_6); gnlProkkaHGDGAODK_7 (original name was: gnl|Prokka|HGDGAODK_7); gnlProkkaHGDGAODK_9 (original name was: gnl|Prokka|HGDGAODK_9); gnlProkkaHGDGAODK_10 (original name was: gnl|Prokka|HGDGAODK_10); gnlProkkaHGDGAODK_11 (original name was: gnl|Prokka|HGDGAODK_11); gnlProkkaHGDGAODK_12 (original name was: gnl|Prokka|HGDGAODK_12); gnlProkkaHGDGAODK_13 (original name was: gnl|Prokka|HGDGAODK_13); gnlProkkaHGDGAODK_14 (original name was: gnl|Prokka|HGDGAODK_14); gnlProkkaHGDGAODK_15 (original name was: gnl|Prokka|HGDGAODK_15); gnlProkkaHGDGAODK_16 (original name was: gnl|Prokka|HGDGAODK_16); gnlProkkaHGDGAODK_17 (original name was: gnl|Prokka|HGDGAODK_17); gnlProkkaHGDGAODK_18 (original name was: gnl|Prokka|HGDGAODK_18); gnlProkkaHGDGAODK_19 (original name was: gnl|Prokka|HGDGAODK_19); gnlProkkaHGDGAODK_20 (original name was: gnl|Prokka|HGDGAODK_20); gnlProkkaHGDGAODK_21 (original name was: gnl|Prokka|HGDGAODK_21); gnlProkkaHGDGAODK_23 (original name was: gnl|Prokka|HGDGAODK_23); gnlProkkaHGDGAODK_24 (original name was: gnl|Prokka|HGDGAODK_24); gnlProkkaHGDGAODK_25 (original name was: gnl|Prokka|HGDGAODK_25); gnlProkkaHGDGAODK_26 (original name was: gnl|Prokka|HGDGAODK_26); gnlProkkaHGDGAODK_27 (original name was: gnl|Prokka|HGDGAODK_27); gnlProkkaHGDGAODK_29 (original name was: gnl|Prokka|HGDGAODK_29); gnlProkkaHGDGAODK_30 (original name was: gnl|Prokka|HGDGAODK_30); gnlProkkaHGDGAODK_32 (original name was: gnl|Prokka|HGDGAODK_32); gnlProkkaHGDGAODK_33 (original name was: gnl|Prokka|HGDGAODK_33); gnlProkkaHGDGAODK_34 (original name was: gnl|Prokka|HGDGAODK_34); gnlProkkaHGDGAODK_35 (original name was: gnl|Prokka|HGDGAODK_35); gnlProkkaHGDGAODK_36 (original name was: gnl|Prokka|HGDGAODK_36); gnlProkkaHGDGAODK_37 (original name was: gnl|Prokka|HGDGAODK_37); gnlProkkaHGDGAODK_38 (original name was: gnl|Prokka|HGDGAODK_38); gnlProkkaHGDGAODK_39 (original name was: gnl|Prokka|HGDGAODK_39); gnlProkkaHGDGAODK_40 (original name was: gnl|Prokka|HGDGAODK_40); gnlProkkaHGDGAODK_41 (original name was: gnl|Prokka|HGDGAODK_41); gnlProkkaHGDGAODK_42 (original name was: gnl|Prokka|HGDGAODK_42); gnlProkkaHGDGAODK_43 (original name was: gnl|Prokka|HGDGAODK_43); gnlProkkaHGDGAODK_44 (original name was: gnl|Prokka|HGDGAODK_44); gnlProkkaHGDGAODK_45 (original name was: gnl|Prokka|HGDGAODK_45); gnlProkkaHGDGAODK_46 (original name was: gnl|Prokka|HGDGAODK_46); gnlProkkaHGDGAODK_47 (original name was: gnl|Prokka|HGDGAODK_47); gnlProkkaHGDGAODK_48 (original name was: gnl|Prokka|HGDGAODK_48); gnlProkkaHGDGAODK_49 (original name was: gnl|Prokka|HGDGAODK_49); gnlProkkaHGDGAODK_50 (original name was: gnl|Prokka|HGDGAODK_50); gnlProkkaHGDGAODK_51 (original name was: gnl|Prokka|HGDGAODK_51); gnlProkkaHGDGAODK_52 (original name was: gnl|Prokka|HGDGAODK_52); gnlProkkaHGDGAODK_53 (original name was: gnl|Prokka|HGDGAODK_53); gnlProkkaHGDGAODK_54 (original name was: gnl|Prokka|HGDGAODK_54); gnlProkkaHGDGAODK_55 (original name was: gnl|Prokka|HGDGAODK_55); gnlProkkaHGDGAODK_56 (original name was: gnl|Prokka|HGDGAODK_56); gnlProkkaHGDGAODK_57 (original name was: gnl|Prokka|HGDGAODK_57); gnlProkkaHGDGAODK_58 (original name was: gnl|Prokka|HGDGAODK_58); gnlProkkaHGDGAODK_59 (original name was: gnl|Prokka|HGDGAODK_59); gnlProkkaHGDGAODK_60 (original name was: gnl|Prokka|HGDGAODK_60); gnlProkkaHGDGAODK_61 (original name was: gnl|Prokka|HGDGAODK_61); gnlProkkaHGDGAODK_62 (original name was: gnl|Prokka|HGDGAODK_62); gnlProkkaHGDGAODK_63 (original name was: gnl|Prokka|HGDGAODK_63); gnlProkkaHGDGAODK_64 (original name was: gnl|Prokka|HGDGAODK_64); gnlProkkaHGDGAODK_65 (original name was: gnl|Prokka|HGDGAODK_65); gnlProkkaHGDGAODK_66 (original name was: gnl|Prokka|HGDGAODK_66); gnlProkkaHGDGAODK_67 (original name was: gnl|Prokka|HGDGAODK_67); gnlProkkaHGDGAODK_68 (original name was: gnl|Prokka|HGDGAODK_68); gnlProkkaHGDGAODK_69 (original name was: gnl|Prokka|HGDGAODK_69); gnlProkkaHGDGAODK_70 (original name was: gnl|Prokka|HGDGAODK_70); gnlProkkaHGDGAODK_71 (original name was: gnl|Prokka|HGDGAODK_71); gnlProkkaHGDGAODK_72 (original name was: gnl|Prokka|HGDGAODK_72); gnlProkkaHGDGAODK_73 (original name was: gnl|Prokka|HGDGAODK_73); gnlProkkaHGDGAODK_74 (original name was: gnl|Prokka|HGDGAODK_74); gnlProkkaHGDGAODK_75 (original name was: gnl|Prokka|HGDGAODK_75); gnlProkkaHGDGAODK_76 (original name was: gnl|Prokka|HGDGAODK_76); gnlProkkaHGDGAODK_77 (original name was: gnl|Prokka|HGDGAODK_77); gnlProkkaHGDGAODK_78 (original name was: gnl|Prokka|HGDGAODK_78); gnlProkkaHGDGAODK_79 (original name was: gnl|Prokka|HGDGAODK_79); gnlProkkaHGDGAODK_80 (original name was: gnl|Prokka|HGDGAODK_80); gnlProkkaHGDGAODK_81 (original name was: gnl|Prokka|HGDGAODK_81); gnlProkkaHGDGAODK_82 (original name was: gnl|Prokka|HGDGAODK_82); gnlProkkaHGDGAODK_83 (original name was: gnl|Prokka|HGDGAODK_83); gnlProkkaHGDGAODK_84 (original name was: gnl|Prokka|HGDGAODK_84); gnlProkkaHGDGAODK_85 (original name was: gnl|Prokka|HGDGAODK_85); gnlProkkaHGDGAODK_86 (original name was: gnl|Prokka|HGDGAODK_86); gnlProkkaHGDGAODK_87 (original name was: gnl|Prokka|HGDGAODK_87); gnlProkkaHGDGAODK_88 (original name was: gnl|Prokka|HGDGAODK_88); gnlProkkaHGDGAODK_89 (original name was: gnl|Prokka|HGDGAODK_89); gnlProkkaHGDGAODK_90 (original name was: gnl|Prokka|HGDGAODK_90); gnlProkkaHGDGAODK_91 (original name was: gnl|Prokka|HGDGAODK_91)

Compact view

gnlProkkaHGDGAODK_8 - Region 1 - T3PKS

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Location: 1 - 30,839 nt. (total: 30,839 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHGDGAODK_22 - Region 1 - terpene

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Location: 7,810 - 28,691 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHGDGAODK_28 - Region 1 - RiPP-like

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Location: 28,904 - 37,813 nt. (total: 8,910 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHGDGAODK_31 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 16,746 nt. (total: 16,746 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.