GCA_004301595.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHLFCPJDF_8 (original name was: gnl|Prokka|HLFCPJDF_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	84,653	115,497

gnlProkkaHLFCPJDF_22 (original name was: gnl|Prokka|HLFCPJDF_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	terpene	7,816	28,697

gnlProkkaHLFCPJDF_28 (original name was: gnl|Prokka|HLFCPJDF_28)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	RiPP-like	28,904	37,819

gnlProkkaHLFCPJDF_31 (original name was: gnl|Prokka|HLFCPJDF_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	cyclic-lactone-autoinducer	14,076	30,827

Region	Type	From	To	Similarity
Region 8.1	T3PKS	84,653	115,497
Region 22.1	terpene	7,816	28,697
Region 28.1	RiPP-like	28,904	37,819
Region 31.1	cyclic-lactone-autoinducer	14,076	30,827

No secondary metabolite regions were found in these records:: gnlProkkaHLFCPJDF_1 (original name was: gnl|Prokka|HLFCPJDF_1); gnlProkkaHLFCPJDF_2 (original name was: gnl|Prokka|HLFCPJDF_2); gnlProkkaHLFCPJDF_3 (original name was: gnl|Prokka|HLFCPJDF_3); gnlProkkaHLFCPJDF_4 (original name was: gnl|Prokka|HLFCPJDF_4); gnlProkkaHLFCPJDF_5 (original name was: gnl|Prokka|HLFCPJDF_5); gnlProkkaHLFCPJDF_6 (original name was: gnl|Prokka|HLFCPJDF_6); gnlProkkaHLFCPJDF_7 (original name was: gnl|Prokka|HLFCPJDF_7); gnlProkkaHLFCPJDF_9 (original name was: gnl|Prokka|HLFCPJDF_9); gnlProkkaHLFCPJDF_10 (original name was: gnl|Prokka|HLFCPJDF_10); gnlProkkaHLFCPJDF_11 (original name was: gnl|Prokka|HLFCPJDF_11); gnlProkkaHLFCPJDF_12 (original name was: gnl|Prokka|HLFCPJDF_12); gnlProkkaHLFCPJDF_13 (original name was: gnl|Prokka|HLFCPJDF_13); gnlProkkaHLFCPJDF_14 (original name was: gnl|Prokka|HLFCPJDF_14); gnlProkkaHLFCPJDF_15 (original name was: gnl|Prokka|HLFCPJDF_15); gnlProkkaHLFCPJDF_16 (original name was: gnl|Prokka|HLFCPJDF_16); gnlProkkaHLFCPJDF_17 (original name was: gnl|Prokka|HLFCPJDF_17); gnlProkkaHLFCPJDF_18 (original name was: gnl|Prokka|HLFCPJDF_18); gnlProkkaHLFCPJDF_19 (original name was: gnl|Prokka|HLFCPJDF_19); gnlProkkaHLFCPJDF_20 (original name was: gnl|Prokka|HLFCPJDF_20); gnlProkkaHLFCPJDF_21 (original name was: gnl|Prokka|HLFCPJDF_21); gnlProkkaHLFCPJDF_23 (original name was: gnl|Prokka|HLFCPJDF_23); gnlProkkaHLFCPJDF_24 (original name was: gnl|Prokka|HLFCPJDF_24); gnlProkkaHLFCPJDF_25 (original name was: gnl|Prokka|HLFCPJDF_25); gnlProkkaHLFCPJDF_26 (original name was: gnl|Prokka|HLFCPJDF_26); gnlProkkaHLFCPJDF_27 (original name was: gnl|Prokka|HLFCPJDF_27); gnlProkkaHLFCPJDF_29 (original name was: gnl|Prokka|HLFCPJDF_29); gnlProkkaHLFCPJDF_30 (original name was: gnl|Prokka|HLFCPJDF_30); gnlProkkaHLFCPJDF_32 (original name was: gnl|Prokka|HLFCPJDF_32); gnlProkkaHLFCPJDF_33 (original name was: gnl|Prokka|HLFCPJDF_33); gnlProkkaHLFCPJDF_34 (original name was: gnl|Prokka|HLFCPJDF_34); gnlProkkaHLFCPJDF_35 (original name was: gnl|Prokka|HLFCPJDF_35); gnlProkkaHLFCPJDF_36 (original name was: gnl|Prokka|HLFCPJDF_36); gnlProkkaHLFCPJDF_37 (original name was: gnl|Prokka|HLFCPJDF_37); gnlProkkaHLFCPJDF_38 (original name was: gnl|Prokka|HLFCPJDF_38); gnlProkkaHLFCPJDF_39 (original name was: gnl|Prokka|HLFCPJDF_39); gnlProkkaHLFCPJDF_40 (original name was: gnl|Prokka|HLFCPJDF_40); gnlProkkaHLFCPJDF_41 (original name was: gnl|Prokka|HLFCPJDF_41); gnlProkkaHLFCPJDF_42 (original name was: gnl|Prokka|HLFCPJDF_42); gnlProkkaHLFCPJDF_43 (original name was: gnl|Prokka|HLFCPJDF_43); gnlProkkaHLFCPJDF_44 (original name was: gnl|Prokka|HLFCPJDF_44); gnlProkkaHLFCPJDF_45 (original name was: gnl|Prokka|HLFCPJDF_45); gnlProkkaHLFCPJDF_46 (original name was: gnl|Prokka|HLFCPJDF_46); gnlProkkaHLFCPJDF_47 (original name was: gnl|Prokka|HLFCPJDF_47); gnlProkkaHLFCPJDF_48 (original name was: gnl|Prokka|HLFCPJDF_48); gnlProkkaHLFCPJDF_49 (original name was: gnl|Prokka|HLFCPJDF_49); gnlProkkaHLFCPJDF_50 (original name was: gnl|Prokka|HLFCPJDF_50); gnlProkkaHLFCPJDF_51 (original name was: gnl|Prokka|HLFCPJDF_51); gnlProkkaHLFCPJDF_52 (original name was: gnl|Prokka|HLFCPJDF_52); gnlProkkaHLFCPJDF_53 (original name was: gnl|Prokka|HLFCPJDF_53); gnlProkkaHLFCPJDF_54 (original name was: gnl|Prokka|HLFCPJDF_54); gnlProkkaHLFCPJDF_55 (original name was: gnl|Prokka|HLFCPJDF_55); gnlProkkaHLFCPJDF_56 (original name was: gnl|Prokka|HLFCPJDF_56); gnlProkkaHLFCPJDF_57 (original name was: gnl|Prokka|HLFCPJDF_57); gnlProkkaHLFCPJDF_58 (original name was: gnl|Prokka|HLFCPJDF_58); gnlProkkaHLFCPJDF_59 (original name was: gnl|Prokka|HLFCPJDF_59); gnlProkkaHLFCPJDF_60 (original name was: gnl|Prokka|HLFCPJDF_60); gnlProkkaHLFCPJDF_61 (original name was: gnl|Prokka|HLFCPJDF_61); gnlProkkaHLFCPJDF_62 (original name was: gnl|Prokka|HLFCPJDF_62); gnlProkkaHLFCPJDF_63 (original name was: gnl|Prokka|HLFCPJDF_63); gnlProkkaHLFCPJDF_64 (original name was: gnl|Prokka|HLFCPJDF_64); gnlProkkaHLFCPJDF_65 (original name was: gnl|Prokka|HLFCPJDF_65); gnlProkkaHLFCPJDF_66 (original name was: gnl|Prokka|HLFCPJDF_66); gnlProkkaHLFCPJDF_67 (original name was: gnl|Prokka|HLFCPJDF_67); gnlProkkaHLFCPJDF_68 (original name was: gnl|Prokka|HLFCPJDF_68); gnlProkkaHLFCPJDF_69 (original name was: gnl|Prokka|HLFCPJDF_69); gnlProkkaHLFCPJDF_70 (original name was: gnl|Prokka|HLFCPJDF_70); gnlProkkaHLFCPJDF_71 (original name was: gnl|Prokka|HLFCPJDF_71); gnlProkkaHLFCPJDF_72 (original name was: gnl|Prokka|HLFCPJDF_72); gnlProkkaHLFCPJDF_73 (original name was: gnl|Prokka|HLFCPJDF_73); gnlProkkaHLFCPJDF_74 (original name was: gnl|Prokka|HLFCPJDF_74); gnlProkkaHLFCPJDF_75 (original name was: gnl|Prokka|HLFCPJDF_75); gnlProkkaHLFCPJDF_76 (original name was: gnl|Prokka|HLFCPJDF_76); gnlProkkaHLFCPJDF_77 (original name was: gnl|Prokka|HLFCPJDF_77); gnlProkkaHLFCPJDF_78 (original name was: gnl|Prokka|HLFCPJDF_78); gnlProkkaHLFCPJDF_79 (original name was: gnl|Prokka|HLFCPJDF_79); gnlProkkaHLFCPJDF_80 (original name was: gnl|Prokka|HLFCPJDF_80); gnlProkkaHLFCPJDF_81 (original name was: gnl|Prokka|HLFCPJDF_81); gnlProkkaHLFCPJDF_82 (original name was: gnl|Prokka|HLFCPJDF_82); gnlProkkaHLFCPJDF_83 (original name was: gnl|Prokka|HLFCPJDF_83)

Compact view

gnlProkkaHLFCPJDF_8 - Region 1 - T3PKS

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Location: 84,653 - 115,497 nt. (total: 30,845 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHLFCPJDF_22 - Region 1 - terpene

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Location: 7,816 - 28,697 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHLFCPJDF_28 - Region 1 - RiPP-like

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Location: 28,904 - 37,819 nt. (total: 8,916 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHLFCPJDF_31 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,076 - 30,827 nt. (total: 16,752 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.