GCA_004301655.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJHJIILNM_7 (original name was: gnl|Prokka|JHJIILNM_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	T3PKS	1	30,839

gnlProkkaJHJIILNM_22 (original name was: gnl|Prokka|JHJIILNM_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	terpene	24,721	45,602

gnlProkkaJHJIILNM_29 (original name was: gnl|Prokka|JHJIILNM_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	RiPP-like	28,904	37,813

gnlProkkaJHJIILNM_33 (original name was: gnl|Prokka|JHJIILNM_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	cyclic-lactone-autoinducer	1	16,746

Region	Type	From	To	Similarity
Region 7.1	T3PKS	1	30,839
Region 22.1	terpene	24,721	45,602
Region 29.1	RiPP-like	28,904	37,813
Region 33.1	cyclic-lactone-autoinducer	1	16,746

No secondary metabolite regions were found in these records:: gnlProkkaJHJIILNM_1 (original name was: gnl|Prokka|JHJIILNM_1); gnlProkkaJHJIILNM_2 (original name was: gnl|Prokka|JHJIILNM_2); gnlProkkaJHJIILNM_3 (original name was: gnl|Prokka|JHJIILNM_3); gnlProkkaJHJIILNM_4 (original name was: gnl|Prokka|JHJIILNM_4); gnlProkkaJHJIILNM_5 (original name was: gnl|Prokka|JHJIILNM_5); gnlProkkaJHJIILNM_6 (original name was: gnl|Prokka|JHJIILNM_6); gnlProkkaJHJIILNM_8 (original name was: gnl|Prokka|JHJIILNM_8); gnlProkkaJHJIILNM_9 (original name was: gnl|Prokka|JHJIILNM_9); gnlProkkaJHJIILNM_10 (original name was: gnl|Prokka|JHJIILNM_10); gnlProkkaJHJIILNM_11 (original name was: gnl|Prokka|JHJIILNM_11); gnlProkkaJHJIILNM_12 (original name was: gnl|Prokka|JHJIILNM_12); gnlProkkaJHJIILNM_13 (original name was: gnl|Prokka|JHJIILNM_13); gnlProkkaJHJIILNM_14 (original name was: gnl|Prokka|JHJIILNM_14); gnlProkkaJHJIILNM_15 (original name was: gnl|Prokka|JHJIILNM_15); gnlProkkaJHJIILNM_16 (original name was: gnl|Prokka|JHJIILNM_16); gnlProkkaJHJIILNM_17 (original name was: gnl|Prokka|JHJIILNM_17); gnlProkkaJHJIILNM_18 (original name was: gnl|Prokka|JHJIILNM_18); gnlProkkaJHJIILNM_19 (original name was: gnl|Prokka|JHJIILNM_19); gnlProkkaJHJIILNM_20 (original name was: gnl|Prokka|JHJIILNM_20); gnlProkkaJHJIILNM_21 (original name was: gnl|Prokka|JHJIILNM_21); gnlProkkaJHJIILNM_23 (original name was: gnl|Prokka|JHJIILNM_23); gnlProkkaJHJIILNM_24 (original name was: gnl|Prokka|JHJIILNM_24); gnlProkkaJHJIILNM_25 (original name was: gnl|Prokka|JHJIILNM_25); gnlProkkaJHJIILNM_26 (original name was: gnl|Prokka|JHJIILNM_26); gnlProkkaJHJIILNM_27 (original name was: gnl|Prokka|JHJIILNM_27); gnlProkkaJHJIILNM_28 (original name was: gnl|Prokka|JHJIILNM_28); gnlProkkaJHJIILNM_30 (original name was: gnl|Prokka|JHJIILNM_30); gnlProkkaJHJIILNM_31 (original name was: gnl|Prokka|JHJIILNM_31); gnlProkkaJHJIILNM_32 (original name was: gnl|Prokka|JHJIILNM_32); gnlProkkaJHJIILNM_34 (original name was: gnl|Prokka|JHJIILNM_34); gnlProkkaJHJIILNM_35 (original name was: gnl|Prokka|JHJIILNM_35); gnlProkkaJHJIILNM_36 (original name was: gnl|Prokka|JHJIILNM_36); gnlProkkaJHJIILNM_37 (original name was: gnl|Prokka|JHJIILNM_37); gnlProkkaJHJIILNM_38 (original name was: gnl|Prokka|JHJIILNM_38); gnlProkkaJHJIILNM_39 (original name was: gnl|Prokka|JHJIILNM_39); gnlProkkaJHJIILNM_40 (original name was: gnl|Prokka|JHJIILNM_40); gnlProkkaJHJIILNM_41 (original name was: gnl|Prokka|JHJIILNM_41); gnlProkkaJHJIILNM_42 (original name was: gnl|Prokka|JHJIILNM_42); gnlProkkaJHJIILNM_43 (original name was: gnl|Prokka|JHJIILNM_43); gnlProkkaJHJIILNM_44 (original name was: gnl|Prokka|JHJIILNM_44); gnlProkkaJHJIILNM_45 (original name was: gnl|Prokka|JHJIILNM_45); gnlProkkaJHJIILNM_46 (original name was: gnl|Prokka|JHJIILNM_46); gnlProkkaJHJIILNM_47 (original name was: gnl|Prokka|JHJIILNM_47); gnlProkkaJHJIILNM_48 (original name was: gnl|Prokka|JHJIILNM_48); gnlProkkaJHJIILNM_49 (original name was: gnl|Prokka|JHJIILNM_49); gnlProkkaJHJIILNM_50 (original name was: gnl|Prokka|JHJIILNM_50); gnlProkkaJHJIILNM_51 (original name was: gnl|Prokka|JHJIILNM_51); gnlProkkaJHJIILNM_52 (original name was: gnl|Prokka|JHJIILNM_52); gnlProkkaJHJIILNM_53 (original name was: gnl|Prokka|JHJIILNM_53); gnlProkkaJHJIILNM_54 (original name was: gnl|Prokka|JHJIILNM_54); gnlProkkaJHJIILNM_55 (original name was: gnl|Prokka|JHJIILNM_55); gnlProkkaJHJIILNM_56 (original name was: gnl|Prokka|JHJIILNM_56); gnlProkkaJHJIILNM_57 (original name was: gnl|Prokka|JHJIILNM_57); gnlProkkaJHJIILNM_58 (original name was: gnl|Prokka|JHJIILNM_58); gnlProkkaJHJIILNM_59 (original name was: gnl|Prokka|JHJIILNM_59); gnlProkkaJHJIILNM_60 (original name was: gnl|Prokka|JHJIILNM_60); gnlProkkaJHJIILNM_61 (original name was: gnl|Prokka|JHJIILNM_61); gnlProkkaJHJIILNM_62 (original name was: gnl|Prokka|JHJIILNM_62); gnlProkkaJHJIILNM_63 (original name was: gnl|Prokka|JHJIILNM_63); gnlProkkaJHJIILNM_64 (original name was: gnl|Prokka|JHJIILNM_64); gnlProkkaJHJIILNM_65 (original name was: gnl|Prokka|JHJIILNM_65); gnlProkkaJHJIILNM_66 (original name was: gnl|Prokka|JHJIILNM_66); gnlProkkaJHJIILNM_67 (original name was: gnl|Prokka|JHJIILNM_67); gnlProkkaJHJIILNM_68 (original name was: gnl|Prokka|JHJIILNM_68); gnlProkkaJHJIILNM_69 (original name was: gnl|Prokka|JHJIILNM_69); gnlProkkaJHJIILNM_70 (original name was: gnl|Prokka|JHJIILNM_70); gnlProkkaJHJIILNM_71 (original name was: gnl|Prokka|JHJIILNM_71); gnlProkkaJHJIILNM_72 (original name was: gnl|Prokka|JHJIILNM_72); gnlProkkaJHJIILNM_73 (original name was: gnl|Prokka|JHJIILNM_73); gnlProkkaJHJIILNM_74 (original name was: gnl|Prokka|JHJIILNM_74); gnlProkkaJHJIILNM_75 (original name was: gnl|Prokka|JHJIILNM_75); gnlProkkaJHJIILNM_76 (original name was: gnl|Prokka|JHJIILNM_76); gnlProkkaJHJIILNM_77 (original name was: gnl|Prokka|JHJIILNM_77); gnlProkkaJHJIILNM_78 (original name was: gnl|Prokka|JHJIILNM_78); gnlProkkaJHJIILNM_79 (original name was: gnl|Prokka|JHJIILNM_79); gnlProkkaJHJIILNM_80 (original name was: gnl|Prokka|JHJIILNM_80); gnlProkkaJHJIILNM_81 (original name was: gnl|Prokka|JHJIILNM_81); gnlProkkaJHJIILNM_82 (original name was: gnl|Prokka|JHJIILNM_82); gnlProkkaJHJIILNM_83 (original name was: gnl|Prokka|JHJIILNM_83); gnlProkkaJHJIILNM_84 (original name was: gnl|Prokka|JHJIILNM_84); gnlProkkaJHJIILNM_85 (original name was: gnl|Prokka|JHJIILNM_85); gnlProkkaJHJIILNM_86 (original name was: gnl|Prokka|JHJIILNM_86); gnlProkkaJHJIILNM_87 (original name was: gnl|Prokka|JHJIILNM_87); gnlProkkaJHJIILNM_88 (original name was: gnl|Prokka|JHJIILNM_88); gnlProkkaJHJIILNM_89 (original name was: gnl|Prokka|JHJIILNM_89); gnlProkkaJHJIILNM_90 (original name was: gnl|Prokka|JHJIILNM_90); gnlProkkaJHJIILNM_91 (original name was: gnl|Prokka|JHJIILNM_91)

Compact view

gnlProkkaJHJIILNM_7 - Region 1 - T3PKS

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Location: 1 - 30,839 nt. (total: 30,839 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJHJIILNM_22 - Region 1 - terpene

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Location: 24,721 - 45,602 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJHJIILNM_29 - Region 1 - RiPP-like

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Location: 28,904 - 37,813 nt. (total: 8,910 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJHJIILNM_33 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 16,746 nt. (total: 16,746 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.