GCA_004301995.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNGBACCLL_8 (original name was: gnl|Prokka|NGBACCLL_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	84,399	115,243

gnlProkkaNGBACCLL_20 (original name was: gnl|Prokka|NGBACCLL_20)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	terpene	7,816	28,697

gnlProkkaNGBACCLL_27 (original name was: gnl|Prokka|NGBACCLL_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	RiPP-like	1	8,916

gnlProkkaNGBACCLL_31 (original name was: gnl|Prokka|NGBACCLL_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	cyclic-lactone-autoinducer	14,074	30,825

Region	Type	From	To	Similarity
Region 8.1	T3PKS	84,399	115,243
Region 20.1	terpene	7,816	28,697
Region 27.1	RiPP-like	1	8,916
Region 31.1	cyclic-lactone-autoinducer	14,074	30,825

No secondary metabolite regions were found in these records:: gnlProkkaNGBACCLL_1 (original name was: gnl|Prokka|NGBACCLL_1); gnlProkkaNGBACCLL_2 (original name was: gnl|Prokka|NGBACCLL_2); gnlProkkaNGBACCLL_3 (original name was: gnl|Prokka|NGBACCLL_3); gnlProkkaNGBACCLL_4 (original name was: gnl|Prokka|NGBACCLL_4); gnlProkkaNGBACCLL_5 (original name was: gnl|Prokka|NGBACCLL_5); gnlProkkaNGBACCLL_6 (original name was: gnl|Prokka|NGBACCLL_6); gnlProkkaNGBACCLL_7 (original name was: gnl|Prokka|NGBACCLL_7); gnlProkkaNGBACCLL_9 (original name was: gnl|Prokka|NGBACCLL_9); gnlProkkaNGBACCLL_10 (original name was: gnl|Prokka|NGBACCLL_10); gnlProkkaNGBACCLL_11 (original name was: gnl|Prokka|NGBACCLL_11); gnlProkkaNGBACCLL_12 (original name was: gnl|Prokka|NGBACCLL_12); gnlProkkaNGBACCLL_13 (original name was: gnl|Prokka|NGBACCLL_13); gnlProkkaNGBACCLL_14 (original name was: gnl|Prokka|NGBACCLL_14); gnlProkkaNGBACCLL_15 (original name was: gnl|Prokka|NGBACCLL_15); gnlProkkaNGBACCLL_16 (original name was: gnl|Prokka|NGBACCLL_16); gnlProkkaNGBACCLL_17 (original name was: gnl|Prokka|NGBACCLL_17); gnlProkkaNGBACCLL_18 (original name was: gnl|Prokka|NGBACCLL_18); gnlProkkaNGBACCLL_19 (original name was: gnl|Prokka|NGBACCLL_19); gnlProkkaNGBACCLL_21 (original name was: gnl|Prokka|NGBACCLL_21); gnlProkkaNGBACCLL_22 (original name was: gnl|Prokka|NGBACCLL_22); gnlProkkaNGBACCLL_23 (original name was: gnl|Prokka|NGBACCLL_23); gnlProkkaNGBACCLL_24 (original name was: gnl|Prokka|NGBACCLL_24); gnlProkkaNGBACCLL_25 (original name was: gnl|Prokka|NGBACCLL_25); gnlProkkaNGBACCLL_26 (original name was: gnl|Prokka|NGBACCLL_26); gnlProkkaNGBACCLL_28 (original name was: gnl|Prokka|NGBACCLL_28); gnlProkkaNGBACCLL_29 (original name was: gnl|Prokka|NGBACCLL_29); gnlProkkaNGBACCLL_30 (original name was: gnl|Prokka|NGBACCLL_30); gnlProkkaNGBACCLL_32 (original name was: gnl|Prokka|NGBACCLL_32); gnlProkkaNGBACCLL_33 (original name was: gnl|Prokka|NGBACCLL_33); gnlProkkaNGBACCLL_34 (original name was: gnl|Prokka|NGBACCLL_34); gnlProkkaNGBACCLL_35 (original name was: gnl|Prokka|NGBACCLL_35); gnlProkkaNGBACCLL_36 (original name was: gnl|Prokka|NGBACCLL_36); gnlProkkaNGBACCLL_37 (original name was: gnl|Prokka|NGBACCLL_37); gnlProkkaNGBACCLL_38 (original name was: gnl|Prokka|NGBACCLL_38); gnlProkkaNGBACCLL_39 (original name was: gnl|Prokka|NGBACCLL_39); gnlProkkaNGBACCLL_40 (original name was: gnl|Prokka|NGBACCLL_40); gnlProkkaNGBACCLL_41 (original name was: gnl|Prokka|NGBACCLL_41); gnlProkkaNGBACCLL_42 (original name was: gnl|Prokka|NGBACCLL_42); gnlProkkaNGBACCLL_43 (original name was: gnl|Prokka|NGBACCLL_43); gnlProkkaNGBACCLL_44 (original name was: gnl|Prokka|NGBACCLL_44); gnlProkkaNGBACCLL_45 (original name was: gnl|Prokka|NGBACCLL_45); gnlProkkaNGBACCLL_46 (original name was: gnl|Prokka|NGBACCLL_46); gnlProkkaNGBACCLL_47 (original name was: gnl|Prokka|NGBACCLL_47); gnlProkkaNGBACCLL_48 (original name was: gnl|Prokka|NGBACCLL_48); gnlProkkaNGBACCLL_49 (original name was: gnl|Prokka|NGBACCLL_49); gnlProkkaNGBACCLL_50 (original name was: gnl|Prokka|NGBACCLL_50); gnlProkkaNGBACCLL_51 (original name was: gnl|Prokka|NGBACCLL_51); gnlProkkaNGBACCLL_52 (original name was: gnl|Prokka|NGBACCLL_52); gnlProkkaNGBACCLL_53 (original name was: gnl|Prokka|NGBACCLL_53); gnlProkkaNGBACCLL_54 (original name was: gnl|Prokka|NGBACCLL_54); gnlProkkaNGBACCLL_55 (original name was: gnl|Prokka|NGBACCLL_55); gnlProkkaNGBACCLL_56 (original name was: gnl|Prokka|NGBACCLL_56); gnlProkkaNGBACCLL_57 (original name was: gnl|Prokka|NGBACCLL_57); gnlProkkaNGBACCLL_58 (original name was: gnl|Prokka|NGBACCLL_58); gnlProkkaNGBACCLL_59 (original name was: gnl|Prokka|NGBACCLL_59); gnlProkkaNGBACCLL_60 (original name was: gnl|Prokka|NGBACCLL_60); gnlProkkaNGBACCLL_61 (original name was: gnl|Prokka|NGBACCLL_61); gnlProkkaNGBACCLL_62 (original name was: gnl|Prokka|NGBACCLL_62); gnlProkkaNGBACCLL_63 (original name was: gnl|Prokka|NGBACCLL_63); gnlProkkaNGBACCLL_64 (original name was: gnl|Prokka|NGBACCLL_64); gnlProkkaNGBACCLL_65 (original name was: gnl|Prokka|NGBACCLL_65); gnlProkkaNGBACCLL_66 (original name was: gnl|Prokka|NGBACCLL_66); gnlProkkaNGBACCLL_67 (original name was: gnl|Prokka|NGBACCLL_67); gnlProkkaNGBACCLL_68 (original name was: gnl|Prokka|NGBACCLL_68); gnlProkkaNGBACCLL_69 (original name was: gnl|Prokka|NGBACCLL_69); gnlProkkaNGBACCLL_70 (original name was: gnl|Prokka|NGBACCLL_70); gnlProkkaNGBACCLL_71 (original name was: gnl|Prokka|NGBACCLL_71); gnlProkkaNGBACCLL_72 (original name was: gnl|Prokka|NGBACCLL_72); gnlProkkaNGBACCLL_73 (original name was: gnl|Prokka|NGBACCLL_73); gnlProkkaNGBACCLL_74 (original name was: gnl|Prokka|NGBACCLL_74); gnlProkkaNGBACCLL_75 (original name was: gnl|Prokka|NGBACCLL_75); gnlProkkaNGBACCLL_76 (original name was: gnl|Prokka|NGBACCLL_76); gnlProkkaNGBACCLL_77 (original name was: gnl|Prokka|NGBACCLL_77); gnlProkkaNGBACCLL_78 (original name was: gnl|Prokka|NGBACCLL_78); gnlProkkaNGBACCLL_79 (original name was: gnl|Prokka|NGBACCLL_79); gnlProkkaNGBACCLL_80 (original name was: gnl|Prokka|NGBACCLL_80); gnlProkkaNGBACCLL_81 (original name was: gnl|Prokka|NGBACCLL_81); gnlProkkaNGBACCLL_82 (original name was: gnl|Prokka|NGBACCLL_82); gnlProkkaNGBACCLL_83 (original name was: gnl|Prokka|NGBACCLL_83); gnlProkkaNGBACCLL_84 (original name was: gnl|Prokka|NGBACCLL_84); gnlProkkaNGBACCLL_85 (original name was: gnl|Prokka|NGBACCLL_85); gnlProkkaNGBACCLL_86 (original name was: gnl|Prokka|NGBACCLL_86); gnlProkkaNGBACCLL_87 (original name was: gnl|Prokka|NGBACCLL_87); gnlProkkaNGBACCLL_88 (original name was: gnl|Prokka|NGBACCLL_88); gnlProkkaNGBACCLL_89 (original name was: gnl|Prokka|NGBACCLL_89); gnlProkkaNGBACCLL_90 (original name was: gnl|Prokka|NGBACCLL_90); gnlProkkaNGBACCLL_91 (original name was: gnl|Prokka|NGBACCLL_91); gnlProkkaNGBACCLL_92 (original name was: gnl|Prokka|NGBACCLL_92); gnlProkkaNGBACCLL_93 (original name was: gnl|Prokka|NGBACCLL_93); gnlProkkaNGBACCLL_94 (original name was: gnl|Prokka|NGBACCLL_94); gnlProkkaNGBACCLL_95 (original name was: gnl|Prokka|NGBACCLL_95)

Compact view

gnlProkkaNGBACCLL_8 - Region 1 - T3PKS

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Location: 84,399 - 115,243 nt. (total: 30,845 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGBACCLL_20 - Region 1 - terpene

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Location: 7,816 - 28,697 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGBACCLL_27 - Region 1 - RiPP-like

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Location: 1 - 8,916 nt. (total: 8,916 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGBACCLL_31 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,074 - 30,825 nt. (total: 16,752 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.