GCA_004302485.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDBMABPDK_7 (original name was: gnl|Prokka|DBMABPDK_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	T3PKS	84,399	115,243

gnlProkkaDBMABPDK_20 (original name was: gnl|Prokka|DBMABPDK_20)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	terpene	7,816	28,697

gnlProkkaDBMABPDK_26 (original name was: gnl|Prokka|DBMABPDK_26)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	RiPP-like	1	8,916

gnlProkkaDBMABPDK_30 (original name was: gnl|Prokka|DBMABPDK_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	cyclic-lactone-autoinducer	14,074	30,825

Region	Type	From	To	Similarity
Region 7.1	T3PKS	84,399	115,243
Region 20.1	terpene	7,816	28,697
Region 26.1	RiPP-like	1	8,916
Region 30.1	cyclic-lactone-autoinducer	14,074	30,825

No secondary metabolite regions were found in these records:: gnlProkkaDBMABPDK_1 (original name was: gnl|Prokka|DBMABPDK_1); gnlProkkaDBMABPDK_2 (original name was: gnl|Prokka|DBMABPDK_2); gnlProkkaDBMABPDK_3 (original name was: gnl|Prokka|DBMABPDK_3); gnlProkkaDBMABPDK_4 (original name was: gnl|Prokka|DBMABPDK_4); gnlProkkaDBMABPDK_5 (original name was: gnl|Prokka|DBMABPDK_5); gnlProkkaDBMABPDK_6 (original name was: gnl|Prokka|DBMABPDK_6); gnlProkkaDBMABPDK_8 (original name was: gnl|Prokka|DBMABPDK_8); gnlProkkaDBMABPDK_9 (original name was: gnl|Prokka|DBMABPDK_9); gnlProkkaDBMABPDK_10 (original name was: gnl|Prokka|DBMABPDK_10); gnlProkkaDBMABPDK_11 (original name was: gnl|Prokka|DBMABPDK_11); gnlProkkaDBMABPDK_12 (original name was: gnl|Prokka|DBMABPDK_12); gnlProkkaDBMABPDK_13 (original name was: gnl|Prokka|DBMABPDK_13); gnlProkkaDBMABPDK_14 (original name was: gnl|Prokka|DBMABPDK_14); gnlProkkaDBMABPDK_15 (original name was: gnl|Prokka|DBMABPDK_15); gnlProkkaDBMABPDK_16 (original name was: gnl|Prokka|DBMABPDK_16); gnlProkkaDBMABPDK_17 (original name was: gnl|Prokka|DBMABPDK_17); gnlProkkaDBMABPDK_18 (original name was: gnl|Prokka|DBMABPDK_18); gnlProkkaDBMABPDK_19 (original name was: gnl|Prokka|DBMABPDK_19); gnlProkkaDBMABPDK_21 (original name was: gnl|Prokka|DBMABPDK_21); gnlProkkaDBMABPDK_22 (original name was: gnl|Prokka|DBMABPDK_22); gnlProkkaDBMABPDK_23 (original name was: gnl|Prokka|DBMABPDK_23); gnlProkkaDBMABPDK_24 (original name was: gnl|Prokka|DBMABPDK_24); gnlProkkaDBMABPDK_25 (original name was: gnl|Prokka|DBMABPDK_25); gnlProkkaDBMABPDK_27 (original name was: gnl|Prokka|DBMABPDK_27); gnlProkkaDBMABPDK_28 (original name was: gnl|Prokka|DBMABPDK_28); gnlProkkaDBMABPDK_29 (original name was: gnl|Prokka|DBMABPDK_29); gnlProkkaDBMABPDK_31 (original name was: gnl|Prokka|DBMABPDK_31); gnlProkkaDBMABPDK_32 (original name was: gnl|Prokka|DBMABPDK_32); gnlProkkaDBMABPDK_33 (original name was: gnl|Prokka|DBMABPDK_33); gnlProkkaDBMABPDK_34 (original name was: gnl|Prokka|DBMABPDK_34); gnlProkkaDBMABPDK_35 (original name was: gnl|Prokka|DBMABPDK_35); gnlProkkaDBMABPDK_36 (original name was: gnl|Prokka|DBMABPDK_36); gnlProkkaDBMABPDK_37 (original name was: gnl|Prokka|DBMABPDK_37); gnlProkkaDBMABPDK_38 (original name was: gnl|Prokka|DBMABPDK_38); gnlProkkaDBMABPDK_39 (original name was: gnl|Prokka|DBMABPDK_39); gnlProkkaDBMABPDK_40 (original name was: gnl|Prokka|DBMABPDK_40); gnlProkkaDBMABPDK_41 (original name was: gnl|Prokka|DBMABPDK_41); gnlProkkaDBMABPDK_42 (original name was: gnl|Prokka|DBMABPDK_42); gnlProkkaDBMABPDK_43 (original name was: gnl|Prokka|DBMABPDK_43); gnlProkkaDBMABPDK_44 (original name was: gnl|Prokka|DBMABPDK_44); gnlProkkaDBMABPDK_45 (original name was: gnl|Prokka|DBMABPDK_45); gnlProkkaDBMABPDK_46 (original name was: gnl|Prokka|DBMABPDK_46); gnlProkkaDBMABPDK_47 (original name was: gnl|Prokka|DBMABPDK_47); gnlProkkaDBMABPDK_48 (original name was: gnl|Prokka|DBMABPDK_48); gnlProkkaDBMABPDK_49 (original name was: gnl|Prokka|DBMABPDK_49); gnlProkkaDBMABPDK_50 (original name was: gnl|Prokka|DBMABPDK_50); gnlProkkaDBMABPDK_51 (original name was: gnl|Prokka|DBMABPDK_51); gnlProkkaDBMABPDK_52 (original name was: gnl|Prokka|DBMABPDK_52); gnlProkkaDBMABPDK_53 (original name was: gnl|Prokka|DBMABPDK_53); gnlProkkaDBMABPDK_54 (original name was: gnl|Prokka|DBMABPDK_54); gnlProkkaDBMABPDK_55 (original name was: gnl|Prokka|DBMABPDK_55); gnlProkkaDBMABPDK_56 (original name was: gnl|Prokka|DBMABPDK_56); gnlProkkaDBMABPDK_57 (original name was: gnl|Prokka|DBMABPDK_57); gnlProkkaDBMABPDK_58 (original name was: gnl|Prokka|DBMABPDK_58); gnlProkkaDBMABPDK_59 (original name was: gnl|Prokka|DBMABPDK_59); gnlProkkaDBMABPDK_60 (original name was: gnl|Prokka|DBMABPDK_60); gnlProkkaDBMABPDK_61 (original name was: gnl|Prokka|DBMABPDK_61); gnlProkkaDBMABPDK_62 (original name was: gnl|Prokka|DBMABPDK_62); gnlProkkaDBMABPDK_63 (original name was: gnl|Prokka|DBMABPDK_63); gnlProkkaDBMABPDK_64 (original name was: gnl|Prokka|DBMABPDK_64); gnlProkkaDBMABPDK_65 (original name was: gnl|Prokka|DBMABPDK_65); gnlProkkaDBMABPDK_66 (original name was: gnl|Prokka|DBMABPDK_66); gnlProkkaDBMABPDK_67 (original name was: gnl|Prokka|DBMABPDK_67); gnlProkkaDBMABPDK_68 (original name was: gnl|Prokka|DBMABPDK_68); gnlProkkaDBMABPDK_69 (original name was: gnl|Prokka|DBMABPDK_69); gnlProkkaDBMABPDK_70 (original name was: gnl|Prokka|DBMABPDK_70); gnlProkkaDBMABPDK_71 (original name was: gnl|Prokka|DBMABPDK_71); gnlProkkaDBMABPDK_72 (original name was: gnl|Prokka|DBMABPDK_72); gnlProkkaDBMABPDK_73 (original name was: gnl|Prokka|DBMABPDK_73); gnlProkkaDBMABPDK_74 (original name was: gnl|Prokka|DBMABPDK_74); gnlProkkaDBMABPDK_75 (original name was: gnl|Prokka|DBMABPDK_75); gnlProkkaDBMABPDK_76 (original name was: gnl|Prokka|DBMABPDK_76); gnlProkkaDBMABPDK_77 (original name was: gnl|Prokka|DBMABPDK_77)

Compact view

gnlProkkaDBMABPDK_7 - Region 1 - T3PKS

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Location: 84,399 - 115,243 nt. (total: 30,845 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDBMABPDK_20 - Region 1 - terpene

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Location: 7,816 - 28,697 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDBMABPDK_26 - Region 1 - RiPP-like

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Location: 1 - 8,916 nt. (total: 8,916 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDBMABPDK_30 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,074 - 30,825 nt. (total: 16,752 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.