GCA_004302585.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGJGICLPD_6 (original name was: gnl|Prokka|GJGICLPD_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	T3PKS	1	30,833

gnlProkkaGJGICLPD_23 (original name was: gnl|Prokka|GJGICLPD_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	terpene	24,715	45,596

gnlProkkaGJGICLPD_29 (original name was: gnl|Prokka|GJGICLPD_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	RiPP-like	28,904	37,807

gnlProkkaGJGICLPD_33 (original name was: gnl|Prokka|GJGICLPD_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	cyclic-lactone-autoinducer	14,064	30,803

Region	Type	From	To	Similarity
Region 6.1	T3PKS	1	30,833
Region 23.1	terpene	24,715	45,596
Region 29.1	RiPP-like	28,904	37,807
Region 33.1	cyclic-lactone-autoinducer	14,064	30,803

No secondary metabolite regions were found in these records:: gnlProkkaGJGICLPD_1 (original name was: gnl|Prokka|GJGICLPD_1); gnlProkkaGJGICLPD_2 (original name was: gnl|Prokka|GJGICLPD_2); gnlProkkaGJGICLPD_3 (original name was: gnl|Prokka|GJGICLPD_3); gnlProkkaGJGICLPD_4 (original name was: gnl|Prokka|GJGICLPD_4); gnlProkkaGJGICLPD_5 (original name was: gnl|Prokka|GJGICLPD_5); gnlProkkaGJGICLPD_7 (original name was: gnl|Prokka|GJGICLPD_7); gnlProkkaGJGICLPD_8 (original name was: gnl|Prokka|GJGICLPD_8); gnlProkkaGJGICLPD_9 (original name was: gnl|Prokka|GJGICLPD_9); gnlProkkaGJGICLPD_10 (original name was: gnl|Prokka|GJGICLPD_10); gnlProkkaGJGICLPD_11 (original name was: gnl|Prokka|GJGICLPD_11); gnlProkkaGJGICLPD_12 (original name was: gnl|Prokka|GJGICLPD_12); gnlProkkaGJGICLPD_13 (original name was: gnl|Prokka|GJGICLPD_13); gnlProkkaGJGICLPD_14 (original name was: gnl|Prokka|GJGICLPD_14); gnlProkkaGJGICLPD_15 (original name was: gnl|Prokka|GJGICLPD_15); gnlProkkaGJGICLPD_16 (original name was: gnl|Prokka|GJGICLPD_16); gnlProkkaGJGICLPD_17 (original name was: gnl|Prokka|GJGICLPD_17); gnlProkkaGJGICLPD_18 (original name was: gnl|Prokka|GJGICLPD_18); gnlProkkaGJGICLPD_19 (original name was: gnl|Prokka|GJGICLPD_19); gnlProkkaGJGICLPD_20 (original name was: gnl|Prokka|GJGICLPD_20); gnlProkkaGJGICLPD_21 (original name was: gnl|Prokka|GJGICLPD_21); gnlProkkaGJGICLPD_22 (original name was: gnl|Prokka|GJGICLPD_22); gnlProkkaGJGICLPD_24 (original name was: gnl|Prokka|GJGICLPD_24); gnlProkkaGJGICLPD_25 (original name was: gnl|Prokka|GJGICLPD_25); gnlProkkaGJGICLPD_26 (original name was: gnl|Prokka|GJGICLPD_26); gnlProkkaGJGICLPD_27 (original name was: gnl|Prokka|GJGICLPD_27); gnlProkkaGJGICLPD_28 (original name was: gnl|Prokka|GJGICLPD_28); gnlProkkaGJGICLPD_30 (original name was: gnl|Prokka|GJGICLPD_30); gnlProkkaGJGICLPD_31 (original name was: gnl|Prokka|GJGICLPD_31); gnlProkkaGJGICLPD_32 (original name was: gnl|Prokka|GJGICLPD_32); gnlProkkaGJGICLPD_34 (original name was: gnl|Prokka|GJGICLPD_34); gnlProkkaGJGICLPD_35 (original name was: gnl|Prokka|GJGICLPD_35); gnlProkkaGJGICLPD_36 (original name was: gnl|Prokka|GJGICLPD_36); gnlProkkaGJGICLPD_37 (original name was: gnl|Prokka|GJGICLPD_37); gnlProkkaGJGICLPD_38 (original name was: gnl|Prokka|GJGICLPD_38); gnlProkkaGJGICLPD_39 (original name was: gnl|Prokka|GJGICLPD_39); gnlProkkaGJGICLPD_40 (original name was: gnl|Prokka|GJGICLPD_40); gnlProkkaGJGICLPD_41 (original name was: gnl|Prokka|GJGICLPD_41); gnlProkkaGJGICLPD_42 (original name was: gnl|Prokka|GJGICLPD_42); gnlProkkaGJGICLPD_43 (original name was: gnl|Prokka|GJGICLPD_43); gnlProkkaGJGICLPD_44 (original name was: gnl|Prokka|GJGICLPD_44); gnlProkkaGJGICLPD_45 (original name was: gnl|Prokka|GJGICLPD_45); gnlProkkaGJGICLPD_46 (original name was: gnl|Prokka|GJGICLPD_46); gnlProkkaGJGICLPD_47 (original name was: gnl|Prokka|GJGICLPD_47); gnlProkkaGJGICLPD_48 (original name was: gnl|Prokka|GJGICLPD_48); gnlProkkaGJGICLPD_49 (original name was: gnl|Prokka|GJGICLPD_49); gnlProkkaGJGICLPD_50 (original name was: gnl|Prokka|GJGICLPD_50); gnlProkkaGJGICLPD_51 (original name was: gnl|Prokka|GJGICLPD_51); gnlProkkaGJGICLPD_52 (original name was: gnl|Prokka|GJGICLPD_52); gnlProkkaGJGICLPD_53 (original name was: gnl|Prokka|GJGICLPD_53); gnlProkkaGJGICLPD_54 (original name was: gnl|Prokka|GJGICLPD_54); gnlProkkaGJGICLPD_55 (original name was: gnl|Prokka|GJGICLPD_55); gnlProkkaGJGICLPD_56 (original name was: gnl|Prokka|GJGICLPD_56); gnlProkkaGJGICLPD_57 (original name was: gnl|Prokka|GJGICLPD_57); gnlProkkaGJGICLPD_58 (original name was: gnl|Prokka|GJGICLPD_58); gnlProkkaGJGICLPD_59 (original name was: gnl|Prokka|GJGICLPD_59); gnlProkkaGJGICLPD_60 (original name was: gnl|Prokka|GJGICLPD_60); gnlProkkaGJGICLPD_61 (original name was: gnl|Prokka|GJGICLPD_61); gnlProkkaGJGICLPD_62 (original name was: gnl|Prokka|GJGICLPD_62); gnlProkkaGJGICLPD_63 (original name was: gnl|Prokka|GJGICLPD_63); gnlProkkaGJGICLPD_64 (original name was: gnl|Prokka|GJGICLPD_64); gnlProkkaGJGICLPD_65 (original name was: gnl|Prokka|GJGICLPD_65); gnlProkkaGJGICLPD_66 (original name was: gnl|Prokka|GJGICLPD_66); gnlProkkaGJGICLPD_67 (original name was: gnl|Prokka|GJGICLPD_67); gnlProkkaGJGICLPD_68 (original name was: gnl|Prokka|GJGICLPD_68); gnlProkkaGJGICLPD_69 (original name was: gnl|Prokka|GJGICLPD_69); gnlProkkaGJGICLPD_70 (original name was: gnl|Prokka|GJGICLPD_70); gnlProkkaGJGICLPD_71 (original name was: gnl|Prokka|GJGICLPD_71); gnlProkkaGJGICLPD_72 (original name was: gnl|Prokka|GJGICLPD_72); gnlProkkaGJGICLPD_73 (original name was: gnl|Prokka|GJGICLPD_73); gnlProkkaGJGICLPD_74 (original name was: gnl|Prokka|GJGICLPD_74); gnlProkkaGJGICLPD_75 (original name was: gnl|Prokka|GJGICLPD_75); gnlProkkaGJGICLPD_76 (original name was: gnl|Prokka|GJGICLPD_76); gnlProkkaGJGICLPD_77 (original name was: gnl|Prokka|GJGICLPD_77); gnlProkkaGJGICLPD_78 (original name was: gnl|Prokka|GJGICLPD_78); gnlProkkaGJGICLPD_79 (original name was: gnl|Prokka|GJGICLPD_79); gnlProkkaGJGICLPD_80 (original name was: gnl|Prokka|GJGICLPD_80); gnlProkkaGJGICLPD_81 (original name was: gnl|Prokka|GJGICLPD_81); gnlProkkaGJGICLPD_82 (original name was: gnl|Prokka|GJGICLPD_82); gnlProkkaGJGICLPD_83 (original name was: gnl|Prokka|GJGICLPD_83); gnlProkkaGJGICLPD_84 (original name was: gnl|Prokka|GJGICLPD_84); gnlProkkaGJGICLPD_85 (original name was: gnl|Prokka|GJGICLPD_85); gnlProkkaGJGICLPD_86 (original name was: gnl|Prokka|GJGICLPD_86); gnlProkkaGJGICLPD_87 (original name was: gnl|Prokka|GJGICLPD_87); gnlProkkaGJGICLPD_88 (original name was: gnl|Prokka|GJGICLPD_88); gnlProkkaGJGICLPD_89 (original name was: gnl|Prokka|GJGICLPD_89); gnlProkkaGJGICLPD_90 (original name was: gnl|Prokka|GJGICLPD_90); gnlProkkaGJGICLPD_91 (original name was: gnl|Prokka|GJGICLPD_91); gnlProkkaGJGICLPD_92 (original name was: gnl|Prokka|GJGICLPD_92); gnlProkkaGJGICLPD_93 (original name was: gnl|Prokka|GJGICLPD_93); gnlProkkaGJGICLPD_94 (original name was: gnl|Prokka|GJGICLPD_94); gnlProkkaGJGICLPD_95 (original name was: gnl|Prokka|GJGICLPD_95); gnlProkkaGJGICLPD_96 (original name was: gnl|Prokka|GJGICLPD_96)

Compact view

gnlProkkaGJGICLPD_6 - Region 1 - T3PKS

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Location: 1 - 30,833 nt. (total: 30,833 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGJGICLPD_23 - Region 1 - terpene

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Location: 24,715 - 45,596 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGJGICLPD_29 - Region 1 - RiPP-like

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Location: 28,904 - 37,807 nt. (total: 8,904 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGJGICLPD_33 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,064 - 30,803 nt. (total: 16,740 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.