GCA_004302715.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHHPDADMI_6 (original name was: gnl|Prokka|HHPDADMI_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	T3PKS	84,393	115,231

gnlProkkaHHPDADMI_25 (original name was: gnl|Prokka|HHPDADMI_25)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	terpene	7,810	28,691

gnlProkkaHHPDADMI_31 (original name was: gnl|Prokka|HHPDADMI_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RiPP-like	28,904	37,813

gnlProkkaHHPDADMI_34 (original name was: gnl|Prokka|HHPDADMI_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	cyclic-lactone-autoinducer	1	16,746

Region	Type	From	To	Similarity
Region 6.1	T3PKS	84,393	115,231
Region 25.1	terpene	7,810	28,691
Region 31.1	RiPP-like	28,904	37,813
Region 34.1	cyclic-lactone-autoinducer	1	16,746

No secondary metabolite regions were found in these records:: gnlProkkaHHPDADMI_1 (original name was: gnl|Prokka|HHPDADMI_1); gnlProkkaHHPDADMI_2 (original name was: gnl|Prokka|HHPDADMI_2); gnlProkkaHHPDADMI_3 (original name was: gnl|Prokka|HHPDADMI_3); gnlProkkaHHPDADMI_4 (original name was: gnl|Prokka|HHPDADMI_4); gnlProkkaHHPDADMI_5 (original name was: gnl|Prokka|HHPDADMI_5); gnlProkkaHHPDADMI_7 (original name was: gnl|Prokka|HHPDADMI_7); gnlProkkaHHPDADMI_8 (original name was: gnl|Prokka|HHPDADMI_8); gnlProkkaHHPDADMI_9 (original name was: gnl|Prokka|HHPDADMI_9); gnlProkkaHHPDADMI_10 (original name was: gnl|Prokka|HHPDADMI_10); gnlProkkaHHPDADMI_11 (original name was: gnl|Prokka|HHPDADMI_11); gnlProkkaHHPDADMI_12 (original name was: gnl|Prokka|HHPDADMI_12); gnlProkkaHHPDADMI_13 (original name was: gnl|Prokka|HHPDADMI_13); gnlProkkaHHPDADMI_14 (original name was: gnl|Prokka|HHPDADMI_14); gnlProkkaHHPDADMI_15 (original name was: gnl|Prokka|HHPDADMI_15); gnlProkkaHHPDADMI_16 (original name was: gnl|Prokka|HHPDADMI_16); gnlProkkaHHPDADMI_17 (original name was: gnl|Prokka|HHPDADMI_17); gnlProkkaHHPDADMI_18 (original name was: gnl|Prokka|HHPDADMI_18); gnlProkkaHHPDADMI_19 (original name was: gnl|Prokka|HHPDADMI_19); gnlProkkaHHPDADMI_20 (original name was: gnl|Prokka|HHPDADMI_20); gnlProkkaHHPDADMI_21 (original name was: gnl|Prokka|HHPDADMI_21); gnlProkkaHHPDADMI_22 (original name was: gnl|Prokka|HHPDADMI_22); gnlProkkaHHPDADMI_23 (original name was: gnl|Prokka|HHPDADMI_23); gnlProkkaHHPDADMI_24 (original name was: gnl|Prokka|HHPDADMI_24); gnlProkkaHHPDADMI_26 (original name was: gnl|Prokka|HHPDADMI_26); gnlProkkaHHPDADMI_27 (original name was: gnl|Prokka|HHPDADMI_27); gnlProkkaHHPDADMI_28 (original name was: gnl|Prokka|HHPDADMI_28); gnlProkkaHHPDADMI_29 (original name was: gnl|Prokka|HHPDADMI_29); gnlProkkaHHPDADMI_30 (original name was: gnl|Prokka|HHPDADMI_30); gnlProkkaHHPDADMI_32 (original name was: gnl|Prokka|HHPDADMI_32); gnlProkkaHHPDADMI_33 (original name was: gnl|Prokka|HHPDADMI_33); gnlProkkaHHPDADMI_35 (original name was: gnl|Prokka|HHPDADMI_35); gnlProkkaHHPDADMI_36 (original name was: gnl|Prokka|HHPDADMI_36); gnlProkkaHHPDADMI_37 (original name was: gnl|Prokka|HHPDADMI_37); gnlProkkaHHPDADMI_38 (original name was: gnl|Prokka|HHPDADMI_38); gnlProkkaHHPDADMI_39 (original name was: gnl|Prokka|HHPDADMI_39); gnlProkkaHHPDADMI_40 (original name was: gnl|Prokka|HHPDADMI_40); gnlProkkaHHPDADMI_41 (original name was: gnl|Prokka|HHPDADMI_41); gnlProkkaHHPDADMI_42 (original name was: gnl|Prokka|HHPDADMI_42); gnlProkkaHHPDADMI_43 (original name was: gnl|Prokka|HHPDADMI_43); gnlProkkaHHPDADMI_44 (original name was: gnl|Prokka|HHPDADMI_44); gnlProkkaHHPDADMI_45 (original name was: gnl|Prokka|HHPDADMI_45); gnlProkkaHHPDADMI_46 (original name was: gnl|Prokka|HHPDADMI_46); gnlProkkaHHPDADMI_47 (original name was: gnl|Prokka|HHPDADMI_47); gnlProkkaHHPDADMI_48 (original name was: gnl|Prokka|HHPDADMI_48); gnlProkkaHHPDADMI_49 (original name was: gnl|Prokka|HHPDADMI_49); gnlProkkaHHPDADMI_50 (original name was: gnl|Prokka|HHPDADMI_50); gnlProkkaHHPDADMI_51 (original name was: gnl|Prokka|HHPDADMI_51); gnlProkkaHHPDADMI_52 (original name was: gnl|Prokka|HHPDADMI_52); gnlProkkaHHPDADMI_53 (original name was: gnl|Prokka|HHPDADMI_53); gnlProkkaHHPDADMI_54 (original name was: gnl|Prokka|HHPDADMI_54); gnlProkkaHHPDADMI_55 (original name was: gnl|Prokka|HHPDADMI_55); gnlProkkaHHPDADMI_56 (original name was: gnl|Prokka|HHPDADMI_56); gnlProkkaHHPDADMI_57 (original name was: gnl|Prokka|HHPDADMI_57); gnlProkkaHHPDADMI_58 (original name was: gnl|Prokka|HHPDADMI_58); gnlProkkaHHPDADMI_59 (original name was: gnl|Prokka|HHPDADMI_59); gnlProkkaHHPDADMI_60 (original name was: gnl|Prokka|HHPDADMI_60); gnlProkkaHHPDADMI_61 (original name was: gnl|Prokka|HHPDADMI_61); gnlProkkaHHPDADMI_62 (original name was: gnl|Prokka|HHPDADMI_62); gnlProkkaHHPDADMI_63 (original name was: gnl|Prokka|HHPDADMI_63); gnlProkkaHHPDADMI_64 (original name was: gnl|Prokka|HHPDADMI_64); gnlProkkaHHPDADMI_65 (original name was: gnl|Prokka|HHPDADMI_65); gnlProkkaHHPDADMI_66 (original name was: gnl|Prokka|HHPDADMI_66); gnlProkkaHHPDADMI_67 (original name was: gnl|Prokka|HHPDADMI_67); gnlProkkaHHPDADMI_68 (original name was: gnl|Prokka|HHPDADMI_68); gnlProkkaHHPDADMI_69 (original name was: gnl|Prokka|HHPDADMI_69); gnlProkkaHHPDADMI_70 (original name was: gnl|Prokka|HHPDADMI_70); gnlProkkaHHPDADMI_71 (original name was: gnl|Prokka|HHPDADMI_71); gnlProkkaHHPDADMI_72 (original name was: gnl|Prokka|HHPDADMI_72); gnlProkkaHHPDADMI_73 (original name was: gnl|Prokka|HHPDADMI_73); gnlProkkaHHPDADMI_74 (original name was: gnl|Prokka|HHPDADMI_74); gnlProkkaHHPDADMI_75 (original name was: gnl|Prokka|HHPDADMI_75); gnlProkkaHHPDADMI_76 (original name was: gnl|Prokka|HHPDADMI_76); gnlProkkaHHPDADMI_77 (original name was: gnl|Prokka|HHPDADMI_77); gnlProkkaHHPDADMI_78 (original name was: gnl|Prokka|HHPDADMI_78); gnlProkkaHHPDADMI_79 (original name was: gnl|Prokka|HHPDADMI_79); gnlProkkaHHPDADMI_80 (original name was: gnl|Prokka|HHPDADMI_80); gnlProkkaHHPDADMI_81 (original name was: gnl|Prokka|HHPDADMI_81); gnlProkkaHHPDADMI_82 (original name was: gnl|Prokka|HHPDADMI_82); gnlProkkaHHPDADMI_83 (original name was: gnl|Prokka|HHPDADMI_83); gnlProkkaHHPDADMI_84 (original name was: gnl|Prokka|HHPDADMI_84); gnlProkkaHHPDADMI_85 (original name was: gnl|Prokka|HHPDADMI_85); gnlProkkaHHPDADMI_86 (original name was: gnl|Prokka|HHPDADMI_86); gnlProkkaHHPDADMI_87 (original name was: gnl|Prokka|HHPDADMI_87); gnlProkkaHHPDADMI_88 (original name was: gnl|Prokka|HHPDADMI_88); gnlProkkaHHPDADMI_89 (original name was: gnl|Prokka|HHPDADMI_89); gnlProkkaHHPDADMI_90 (original name was: gnl|Prokka|HHPDADMI_90)

Compact view

gnlProkkaHHPDADMI_6 - Region 1 - T3PKS

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Location: 84,393 - 115,231 nt. (total: 30,839 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHHPDADMI_25 - Region 1 - terpene

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Location: 7,810 - 28,691 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHHPDADMI_31 - Region 1 - RiPP-like

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Location: 28,904 - 37,813 nt. (total: 8,910 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHHPDADMI_34 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 16,746 nt. (total: 16,746 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.